Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	311,481	C→T	intergenic (‑145/‑631)	ecpR ← / → ykgL	DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	311,481	0	C	T	100.0%	279.5 / NA	82	intergenic (‑145/‑631)	ecpR/ykgL	DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (41/41);  total (41/41)

AAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAATATAACGTTC  >  NC_000913/311345‑311615                                                                                                                                         |                                                                                                                                       aaaCCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCg                                                                                                                                     <  1:189846/140‑1 (MQ=255)   aCCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGAt                                                                                                                                   <  2:82700/140‑1 (MQ=255)   aCCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGAt                                                                                                                                   >  1:462730/1‑140 (MQ=255)     cTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGa                                                                                                                                 <  2:690883/140‑1 (MQ=255)     cTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGa                                                                                                                                 <  2:643800/140‑1 (MQ=255)     cTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGa                                                                                                                                 <  2:45136/140‑1 (MQ=255)     cTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGa                                                                                                                                 <  2:324241/140‑1 (MQ=255)        taaaaattACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAgtg                                                                                                                              >  1:39341/7‑140 (MQ=255)             tttACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAat                                                                                                                         <  2:716640/140‑1 (MQ=255)               tACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAatat                                                                                                                       >  1:84517/1‑140 (MQ=255)                  aGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCg                                                                                                                                     <  1:156917/123‑1 (MQ=255)                  aGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCg                                                                                                                                     >  2:156917/1‑123 (MQ=255)                  aGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATAtgtg                                                                                                                    >  2:212099/1‑140 (MQ=255)                    gTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGaa                                                                                                                  <  2:852112/140‑1 (MQ=255)                    gTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGaa                                                                                                                  <  2:199337/140‑1 (MQ=255)                     tGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAAc                                                                                                                 >  2:499568/1‑140 (MQ=255)                          tCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGaaa                                                                                                            <  1:576920/140‑1 (MQ=255)                            aGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAg                                                                                                          <  1:212099/140‑1 (MQ=255)                              tttCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTTAACGGAAAAGGa                                                                                                        >  2:530480/1‑140 (MQ=255)                              tttCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGa                                                                                                        >  2:479966/1‑140 (MQ=255)                              tttCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGa                                                                                                        >  1:159230/1‑140 (MQ=255)                                       tAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATgg                                                                                               <  2:97067/140‑1 (MQ=255)                                        aaaCCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGt                                                                                              <  2:39341/140‑1 (MQ=255)                                        aaaCCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGt                                                                                              <  1:675473/140‑1 (MQ=255)                                            cGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAg                                                                                          >  1:314149/1‑140 (MQ=255)                                              gAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTc                                                                                        >  2:177565/1‑140 (MQ=255)                                               aaGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCa                                                                                       <  2:503810/140‑1 (MQ=255)                                               aaGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCa                                                                                       <  2:583726/140‑1 (MQ=255)                                                 gTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAat                                                                                     >  1:138677/1‑140 (MQ=255)                                                        aGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGa                                                                              <  1:52924/140‑1 (MQ=255)                                                           tACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGaaaa                                                                           <  1:949846/140‑1 (MQ=255)                                                           tACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACAGAAAAGGAATTCAATGGTTAAGTCAATATTTAGaaaa                                                                           <  2:84517/140‑1 (MQ=255)                                                            aCGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGaaaaa                                                                          >  1:697984/1‑140 (MQ=255)                                                              gtagtaCATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACt                                                                        >  1:43937/1‑140 (MQ=255)                                                              gtagtaCATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACt                                                                        >  2:252213/1‑140 (MQ=255)                                                                  taCATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGaaa                                                                    >  1:310444/1‑140 (MQ=255)                                                                     atatCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAata                                                                 <  2:18947/140‑1 (MQ=255)                                                                       atCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATAtt                                                               >  1:56493/1‑140 (MQ=255)                                                                       atCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATAtt                                                               >  1:725724/1‑140 (MQ=255)                                                                       atCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATAtt                                                               >  1:598096/1‑140 (MQ=255)                                                                       atCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATAtt                                                               >  2:163401/1‑140 (MQ=255)                                                                       atCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATAtt                                                               >  2:216992/1‑140 (MQ=255)                                                                       atCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATAtt                                                               >  1:497561/1‑140 (MQ=255)                                                                       atCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATAtt                                                               >  2:797921/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  1:633832/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  2:82622/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  2:890980/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  2:944401/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  2:51015/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  2:129626/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  2:601817/1‑140 (MQ=255)                                                                            tAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCttt                                                          >  1:835699/1‑140 (MQ=255)                                                                                 gTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGa                                                     >  2:758826/1‑140 (MQ=255)                                                                                   tAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATa                                                   <  2:462730/140‑1 (MQ=255)                                                                                   tAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATa                                                   >  1:238367/1‑140 (MQ=255)                                                                                     aaCGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATaag                                                 <  1:499568/140‑1 (MQ=255)                                                                                          gaTTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAgaagaa                                            >  1:331510/1‑140 (MQ=255)                                                                                           aTTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGaaa                                           >  1:858856/1‑140 (MQ=255)                                                                                           aTTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGaaa                                           <  1:82622/140‑1 (MQ=255)                                                                                            ttAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGaaaa                                          <  1:51015/140‑1 (MQ=255)                                                                                               aGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGa                                       >  1:674743/1‑140 (MQ=255)                                                                                                 tttAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACa                                     <  2:238367/140‑1 (MQ=255)                                                                                                     attattTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTg                                 >  2:910098/1‑140 (MQ=255)                                                                                                     attattTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTg                                 <  2:725724/140‑1 (MQ=255)                                                                                                      ttattTTCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTgg                                <  2:835699/140‑1 (MQ=255)                                                                                                           ttCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTGGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCa                           >  1:193868/1‑140 (MQ=255)                                                                                                            tCGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTTAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCAt                          <  1:530480/140‑1 (MQ=255)                                                                                                             cGATTGGGCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATa                         <  1:890980/140‑1 (MQ=255)                                                                                                                   ggCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTa                   >  1:5754/1‑140 (MQ=255)                                                                                                                    gCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTAt                  <  2:674743/140‑1 (MQ=255)                                                                                                                    gCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTAt                  <  2:5754/140‑1 (MQ=255)                                                                                                                    gCTTAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTAt                  <  2:43937/140‑1 (MQ=255)                                                                                                                       tAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTGGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTgg               <  2:193868/140‑1 (MQ=255)                                                                                                                       tAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTgg               <  1:163401/140‑1 (MQ=255)                                                                                                                       tAAATTTATGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTgg               <  2:202436/140‑1 (MQ=255)                                                                                                                              aTGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAAtata        <  1:216992/140‑1 (MQ=255)                                                                                                                              aTGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAAtata        <  2:497561/140‑1 (MQ=255)                                                                                                                              aTGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAAtata        <  1:66196/140‑1 (MQ=255)                                                                                                                              aTGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAAtata        >  1:656401/1‑140 (MQ=255)                                                                                                                               tGTTTTTTTTTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAATATaa       <  2:383554/140‑1 (MQ=255)                                                                                                                                   ttttttTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAATATAACGtt   >  1:337932/1‑140 (MQ=255)                                                                                                                                   ttttttTCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAATATAACGtt   <  1:453731/140‑1 (MQ=255)                                                                                                                                    ttttttCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAATATAACGTTc  >  2:949833/1‑140 (MQ=255)                                                                                                                                         |                                                                                                                                       AAACCTGTAATTTTTACAGGTGCATTCAGTTTCCTTAGTAAACCGGAAGTAAATAAGATACGTAGTACATATCAATAAAGGTTAAACGAGATTAAGTTTAATTATTTTCGATTGGGCTTAAATTTATGTTTTTTTTCCCGATGAGTGTCAATATGTGAACGGAAAAGGAATTCAATGGTTAAGTCAATATTTAGAAAAACTGAAAATATTGCTTTTTTGATAAGAAGAAAAAGACATTTGGTTTCATAAGGTTATTGGCAATATAACGTTC  >  NC_000913/311345‑311615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑