New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2683552 =	49 (0.780)	3 (0.050)	3/264	6.1	5.8%	coding (690/1194 nt)	yphH	putative DNA‑binding transcriptional regulator, NAGC‑like
	?	NC_000913	2683644 =	50 (0.830)					coding (782/1194 nt)	yphH	putative DNA‑binding transcriptional regulator, NAGC‑like
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAGC  >  NC_000913/2683505‑2683783                                                                                                                                            |                                                                                                                                            tACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGt                                                                                                                                             >  2:428948/1‑140 (MQ=255)  aCGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTc                                                                                                                                            >  2:78436/1‑140 (MQ=255)    ggCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGc                                                                                                                                          <  2:424314/140‑1 (MQ=255)     gCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGcc                                                                                                                                         <  2:317254/140‑1 (MQ=255)             tcgtcgTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAg                                                                                                                                 <  2:839855/140‑1 (MQ=255)             tcgtcgTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAg                                                                                                                                 <  1:692435/140‑1 (MQ=255)             tcgtcgTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAg                                                                                                                                 <  1:411115/140‑1 (MQ=255)                tcgttcgtGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAgcgc                                                                                                                              >  1:997452/1‑140 (MQ=255)                     cgtGATTAATGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTaa                                                                                                                         >  1:223836/1‑140 (MQ=255)                                aGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGgcg                                                                                                              <  1:402819/140‑1 (MQ=255)                                               gCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGgc                                                                                                               >  2:180564/1‑124 (MQ=255)                                               gCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGgc                                                                                                               <  1:180564/124‑1 (MQ=255)                                                  gcaggTATGGTAGGGGACAGATTGGTCACACCCTCCTTAATCCGGATGGGGTCGGCTGCGACTGTGGACGTTATGGCTGGCTGGAAACTGTCGGCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATca                                                                                            <  2:1034526/136‑1 (MQ=255)                                                     tGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACaa                                                                                         <  1:823328/140‑1 (MQ=255)                                                     tGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACaa                                                                                         <  2:343443/140‑1 (MQ=255)                                                            tAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTa                                                                                  >  1:589929/1‑140 (MQ=255)                                                             aGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGATACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAg                                                                                 >  1:145852/1‑140 (MQ=255)                                                             aGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAg                                                                                 >  1:457189/1‑140 (MQ=255)                                                             aGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAg                                                                                 >  1:604099/1‑140 (MQ=255)                                                              gCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGt                                                                                >  2:415126/1‑140 (MQ=255)                                                               cGGACAGATTGGTCACACCATCGTTAATCCGGATTGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTa                                                                               >  2:455030/1‑140 (MQ=255)                                                               cGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGtt                                                                                   >  1:754371/1‑136 (MQ=255)                                                               cGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGtt                                                                                   <  2:754371/136‑1 (MQ=255)                                                               cGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTa                                                                               >  1:688367/1‑140 (MQ=255)                                                               cGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTa                                                                               <  2:557696/140‑1 (MQ=255)                                                                ggACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGt                                                                                    <  1:545981/134‑1 (MQ=255)                                                                ggACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGt                                                                                    >  2:545981/1‑134 (MQ=255)                                                                 gACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAgctgt                                                                             >  1:1034526/1‑136 (MQ=255)                                                                     gATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTa                                                                               <  2:889277/134‑1 (MQ=255)                                                                     gATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTa                                                                               >  1:889277/1‑134 (MQ=255)                                                                     gATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAAc                                                                         >  2:262437/1‑140 (MQ=255)                                                                      aTTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACt                                                                        >  1:198448/1‑140 (MQ=255)                                                                         ggTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGa                                                                     <  1:415126/140‑1 (MQ=255)                                                                               acCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGa                                                               >  1:329844/1‑140 (MQ=255)                                                                               acCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGa                                                               >  1:461878/1‑140 (MQ=255)                                                                                ccATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGaa                                                              >  1:446704/1‑140 (MQ=255)                                                                                    cGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGTGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAAc                                                          >  2:942666/1‑140 (MQ=255)                                                                                    cGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAAc                                                          >  2:356090/1‑140 (MQ=255)                                                                                         aTCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACt                                                     >  2:799902/1‑140 (MQ=255)                                                                                               aTGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAgcg                                               >  2:178025/1‑140 (MQ=255)                                                                                               aTGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAgcg                                               >  1:197930/1‑140 (MQ=255)                                                                                                 ggCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCa                                             <  2:223836/140‑1 (MQ=255)                                                                                                       gtcTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAAt                                       <  1:428948/140‑1 (MQ=255)                                                                                                          tGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGc                                    >  2:293126/1‑140 (MQ=255)                                                                                                                  tgGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGc                            >  1:525388/1‑140 (MQ=255)                                                                                                                   ggACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCa                           <  2:329844/140‑1 (MQ=255)                                                                                                                          aTGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGga                    <  1:178025/140‑1 (MQ=255)                                                                                                                          aTGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGga                    <  2:123499/140‑1 (MQ=255)                                                                                                                                gCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCg              <  2:688367/140‑1 (MQ=255)                                                                                                                                 ccTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGt             >  1:201910/1‑140 (MQ=255)                                                                                                                                      aaaCTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATCGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATc        <  1:78436/140‑1 (MQ=255)                                                                                                                                           gTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAg   >  1:954811/1‑140 (MQ=255)                                                                                                                                           gTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAg   >  1:611234/1‑140 (MQ=255)                                                                                                                                           gTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAg   >  2:873591/1‑140 (MQ=255)                                                                                                                                           gTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGACCACCAg   >  1:322045/1‑140 (MQ=255)                                                                                                                                           gTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAATGGAGAACCGTGGATCACCAg   >  1:19771/1‑140 (MQ=255)                                                                                                                                            tCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAGc  >  1:976889/1‑140 (MQ=255)                                                                                                                                            |                                                                                                                                            TACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAGC  >  NC_000913/2683505‑2683783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.