Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 2,765,463 (TATGGCAC)6→7 intergenic (‑310/+50) abpA ← / ← yfjM CP4‑57 prophage; anti‑bacteriophage protein/CP4‑57 prophage; protein YfjM

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2765412 =13 (0.120)88 (1.230) 45/188 0.2 95.2% intergenic (‑259/+101) abpA/yfjM CP4‑57 prophage; anti‑bacteriophage protein/CP4‑57 prophage; protein YfjM
?NC_000913 = 2765419 0 (0.000)intergenic (‑266/+94) abpA/yfjM CP4‑57 prophage; anti‑bacteriophage protein/CP4‑57 prophage; protein YfjM

Only 100 of 268 total aligned reads displayed.

AGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCTGGTTGGTAGGGTCATATCTCGATGCTCT  >  NC_000913/2765273‑2765549
                                                                                                                                           |                                                                                                                                         
aggattccacaaatattgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgg                                                                                                                                           >  1:538204‑M1/140‑140 (MQ=255)
aggattccacaaatattgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgg                                                                                                                                           >  1:1203688‑M1/140‑140 (MQ=255)
aggattccacaaatattgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagatcagagctgagaccgccaaccgcactatgg                                                                                                                                           >  1:891451‑M1/140‑140 (MQ=255)
aggattccacaaatattgtaaccctgacgtataatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgg                                                                                                                                           >  1:823867‑M1/140‑140 (MQ=255)
   ttttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCgcac                                                                                                                                        <  2:60177/140‑1 (MQ=255)
    tttCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCgcact                                                                                                                                       >  1:14321/1‑140 (MQ=255)
      tCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCgcactat                                                                                                                                     >  1:88030/1‑140 (MQ=255)
       cacaaatattgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatg                                                                                                                                    <  2:442856‑M1/8‑1 (MQ=255)
        acaaatattgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatgg                                                                                                                                   >  2:88030‑M1/132‑140 (MQ=255)
        acaaatattgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatgg                                                                                                                                   >  1:876047‑M1/132‑140 (MQ=255)
        acaaatattgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatgg                                                                                                                                   >  2:302866‑M1/132‑140 (MQ=255)
        aGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGg                                                                                                                                   >  2:467373‑M2/1‑139 (MQ=255)
               cacaAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatg                                                                                                                            <  1:1164906‑M2/140‑9 (MQ=255)
                tgtaaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatgg                                                                                                                           >  1:1536465‑M1/124‑140 (MQ=255)
                acaAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatgg                                                                                                                           >  2:521978‑M2/1‑131 (MQ=255)
                  taaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggca                                                                                                                         >  2:497153‑M1/122‑140 (MQ=255)
                  taaccctgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggca                                                                                                                         >  1:807494‑M1/122‑140 (MQ=255)
                  aaaTATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggca                                                                                                                         >  2:420499‑M2/1‑129 (MQ=255)
                    atatTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcact                                                                                                                       <  2:1270962‑M2/140‑14 (MQ=255)
                        tgacgtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatgg                                                                                                                   >  2:1138362‑M1/116‑140 (MQ=255)
                         gTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggc                                                                                                                  <  1:989764‑M2/140‑19 (MQ=255)
                           aaCCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcacta                                                                                                                      >  2:986298‑M2/1‑120 (MQ=255)
                            gtctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcact                                                                                                               >  2:1413242‑M1/112‑140 (MQ=255)
                             tctaatttggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcacta                                                                                                              >  2:132354‑M1/111‑140 (MQ=255)
                                tGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatgg                                                                                                           >  1:1208157‑M2/1‑115 (MQ=255)
                                aatttggttatataacatactaccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcactatgg                                                                                                           >  1:1737744‑M1/108‑140 (MQ=255)
                                  aCGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatg                                                                                                            <  1:1533340‑M2/137‑25 (MQ=255)
                                  aCGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatg                                                                                                            >  2:1533340‑M2/1‑113 (MQ=255)
                                     tCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcacta                                                                                                      >  1:1573198‑M2/1‑110 (MQ=255)
                                     ggttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcactatggcacta                                                                                                      >  2:36525‑M1/103‑140 (MQ=255)
                                       ttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcactat                                                                                                             <  2:1325828‑M1/31‑1 (MQ=255)
                                       ttatataacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcactat                                                                                                             >  1:1325828‑M1/101‑131 (MQ=255)
                                        aaTTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatgg                                                                                                   >  1:995154‑M2/1‑107 (MQ=255)
                                        aaTTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatgg                                                                                                   >  2:1022749‑M2/1‑107 (MQ=255)
                                        aaTTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatgg                                                                                                   >  2:1538584‑M2/1‑107 (MQ=255)
                                        aaTTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatgg                                                                                                   >  2:688846‑M2/1‑107 (MQ=255)
                                            taacatactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcactatggcactatggcact                                                                                               >  2:1515783‑M1/96‑140 (MQ=255)
                                               ttATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatg                                                                                            <  1:898933‑M2/140‑41 (MQ=255)
                                                atactgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcactatggcactatggcactatgg                                                                                           <  1:528711‑M1/49‑1 (MQ=255)
                                                    tgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCAcc                                                                                       <  2:1016331‑M1/53‑1 (MQ=255)
                                                    tgccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCAcc                                                                                       <  2:764297‑M1/53‑1 (MQ=255)
                                                    taACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGACACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcact                                                                                       >  1:424701‑M2/1‑95 (MQ=255)
                                                     gccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCg                                                                                      <  1:1701347‑M1/54‑1 (MQ=255)
                                                      ccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatggcactatggcactatggcactatggcactatggcactatggcactatgg                                                                                           >  1:333555‑M1/86‑134 (MQ=255)
                                                      ccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGc                                                                                     <  1:761518‑M1/55‑1 (MQ=255)
                                                      ccccaactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGc                                                                                     <  2:448999‑M1/55‑1 (MQ=255)
                                                         tACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggc                                                                                  <  2:1747929‑M2/140‑51 (MQ=255)
                                                         caactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAg                                                                                  >  2:590971‑M1/83‑140 (MQ=255)
                                                         caactaacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAg                                                                                  <  2:324613‑M1/58‑1 (MQ=255)
                                                            tGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcacc                                                                               <  1:1404513‑M2/140‑54 (MQ=255)
                                                             taacgtaaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGAt                                                                              >  1:442856‑M1/79‑140 (MQ=255)
                                                             gCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccg                                                                              <  1:590971‑M2/140‑55 (MQ=255)
                                                              ccccAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgc                                                                             <  2:304402‑M2/140‑56 (MQ=255)
                                                              ccccAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgc                                                                             <  1:223530‑M2/140‑56 (MQ=255)
                                                              ccccAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgc                                                                             <  2:1196894‑M2/140‑56 (MQ=255)
                                                              ccccAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatgg                                                                                   <  2:333555‑M2/134‑50 (MQ=255)
                                                              ccccAACTAACGTAAGGGAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAACTGAGACCGCCAACCGCACTATGgcactatggaactatggcactatggcactatggcactatggcactatggcaccgc                                                                             <  1:1312329‑M2/140‑56 (MQ=255)
                                                                 cAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccag                                                                          >  1:958003‑M2/1‑82 (MQ=255)
                                                                 cAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccag                                                                          >  2:1650528‑M2/1‑82 (MQ=255)
                                                                  taaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTaa                                                                         >  2:308539‑M1/74‑140 (MQ=255)
                                                                   aaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAAt                                                                        >  1:161416‑M1/73‑140 (MQ=255)
                                                                   aaggtaggcacagccttaatcaaggttttggttttcaaatagttcagagcggagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAAt                                                                        >  1:1196894‑M1/73‑140 (MQ=255)
                                                                     ggtaggcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATca                                                                      >  2:1701347‑M1/71‑140 (MQ=255)
                                                                        cGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgt                                                                   <  1:1493187‑M2/140‑66 (MQ=255)
                                                                          gcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACtt                                                                 <  1:1389376‑M1/75‑1 (MQ=255)
                                                                          gcacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACtt                                                                 <  2:1638638‑M1/75‑1 (MQ=255)
                                                                           cacagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCACCAGCGATTGTAATCACACTTg                                                                <  1:1380784‑M1/76‑1 (MQ=255)
                                                                            acagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGa                                                               >  2:338478‑M1/64‑140 (MQ=255)
                                                                            acagccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGa                                                               >  1:698038‑M1/64‑140 (MQ=255)
                                                                              agccttaatcaaggttttggttttcaaatagttcagagctgagcccgccaaccgcactatgGCACTATGGCACTATGGCCCTATGGCACTATGGCCCTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGata                                                             >  1:1563507‑M1/62‑140 (MQ=255)
                                                                              agccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGata                                                             >  2:180571‑M1/62‑140 (MQ=255)
                                                                               gccttaatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGa                                                               <  1:1004858‑M1/77‑1 (MQ=255)
                                                                                 ggCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTTAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacact                                                          <  2:1599477‑M2/140‑75 (MQ=255)
                                                                                  gCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacactt                                                         <  2:1366189‑M2/140‑76 (MQ=255)
                                                                                   taatcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATtata                                                        >  2:966449‑M1/57‑140 (MQ=255)
                                                                                   cacaGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttg                                                        <  2:883044‑M2/140‑77 (MQ=255)
                                                                                    acaGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatagcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttga                                                       >  1:1256159‑M2/1‑63 (MQ=255)
                                                                                     atcaaggttttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATaaa                                                      <  1:1124618‑M1/86‑1 (MQ=255)
                                                                                        ccTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcattatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatatt                                                   <  1:860937‑M2/140‑82 (MQ=255)
                                                                                              ttggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTg                                             <  2:162329‑M1/95‑1 (MQ=255)
                                                                                                ggttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCa                                           >  1:1121427‑M1/44‑140 (MQ=255)
                                                                                                 gttttcaaatagttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCAc                                          >  1:1638638‑M1/43‑140 (MQ=255)
                                                                                                  ggttttggttttCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacaca                                         >  1:772337‑M2/1‑49 (MQ=255)
                                                                                                  ggttttggttttCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacaca                                         <  1:1711492‑M2/140‑92 (MQ=255)
                                                                                                    ttcaaatagttcagagctgagaccgccacccgcactatgGCCCTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCa                                       >  1:176285‑M1/40‑140 (MQ=255)
                                                                                                         gttttCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacacagttgcac                                  >  2:898933‑M2/1‑42 (MQ=255)
                                                                                                           agttcagagctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCACCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTc                                >  2:1380784‑M1/33‑140 (MQ=255)
                                                                                                                    ctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCtggttggt                       >  2:48949‑M1/24‑140 (MQ=255)
                                                                                                                    ctgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCtggttggt                       >  1:1016331‑M1/24‑140 (MQ=255)
                                                                                                                     tgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCTGGTTGGTa                      <  1:989528‑M1/118‑1 (MQ=255)
                                                                                                                     tgagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCTGGTTGGTa                      >  1:324613‑M1/23‑140 (MQ=255)
                                                                                                                      gagaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCTGGTTGGTAg                     >  2:1711492‑M1/22‑140 (MQ=255)
                                                                                                                       cAGAGCTGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacacagttgcacgcattatttcctgg                    >  1:336082‑M2/1‑28 (MQ=255)
                                                                                                                       agaccgccaaccgcactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCTGGTTGGTAgg                    <  2:81255‑M1/120‑1 (MQ=255)
                                                                                                                             tGAGACCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacacagttgcacgcattatttcctggttggta              <  2:1031036‑M2/140‑119 (MQ=255)
                                                                                                                               agaCCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacacagttgcacgcattatttcctggttggtagg            <  2:216042‑M2/140‑121 (MQ=255)
                                                                                                                               agaCCGCCAACCGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacacagttgcacgcattatttcctggttggtagg            <  1:929681‑M2/140‑121 (MQ=255)
                                                                                                                                    cactatgGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCTGGTTGGTAGGGTCATATCTCGAt       >  1:1031036‑M1/8‑140 (MQ=255)
                                                                                                                                         ccGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacacagttgcacgcgttatttcctggctggtagggccatatcac  <  2:1154055‑M2/140‑131 (MQ=255)
                                                                                                                                         ccGCACTATGgcactatggcactatggcactatggcactatggcactatggcactatggcaccgccagcgattgtaatcacacttgatattataaaacacagttgcacgcattatttcctggttggtagggtcatatctc  >  1:448999‑M2/1‑10 (MQ=255)
                                                                                                                                           |                                                                                                                                         
AGCTTTTCAGGATTCCACAAATATTGTAACCCTGACGTCTAATTTGGTTATATAACATACTGCCCCAACTAACGTAAGGTAGGCACAGCCTTAATCAAGGTTTTGGTTTTCAAATAGTTCAGAGCTGAGACCGCCAACCGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACTATGGCACCGCCAGCGATTGTAATCACACTTGATATTATAAAACACAGTTGCACGCATTATTTCCTGGTTGGTAGGGTCATATCTCGATGCTCT  >  NC_000913/2765273‑2765549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.