Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,206,435	0	C	T	36.5%	76.5 / 45.2	63	intergenic (‑179/‑28)	ttdR/ttdA	DNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (0/40);  new base T (23/0);  total (23/40)
Fisher's exact test for biased strand distribution p-value = 1.06e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

AACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGA  >  NC_000913/3206300‑3206566                                                                                                                                         |                                                                                                                                     aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGa                                                                                                                                  <  1:462033/140‑1 (MQ=255)   cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACa                                                                                                                                <  2:927363/140‑1 (MQ=255)   cATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACa                                                                                                                                <  2:1741226/140‑1 (MQ=255)             cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTTCGACAaaaaa‑aaaaa                                                                                                                     >  1:67204/1‑140 (MQ=255)             cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGAcaaaaac‑aaaaa                                                                                                                     >  2:1451805/1‑140 (MQ=255)             cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAaaaaa‑aaaaa                                                                                                                     >  1:310218/1‑140 (MQ=255)             cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAaaaaa‑aaaaa                                                                                                                     >  2:549117/1‑140 (MQ=255)             cccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTAACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGACGAATTTTCCCAG‑CAAATAG‑aaaaa                                                                                                                     >  1:1413740/1‑140 (MQ=255)                tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTg                                                                                                                  <  1:65737/140‑1 (MQ=255)                tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTg                                                                                                                  <  1:157181/140‑1 (MQ=255)                  ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTTCGACAAAAAA‑AAAAAATggg                                                                                                                >  1:1110673/1‑139 (MQ=255)                  ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGGAGTTTGTGGCGGCCGAATTTTTCACGTCAAA‑AC‑aaaaaaacgg                                                                                                                >  2:196471/1‑135 (MQ=255)                   tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAg                                                                                                               <  2:1676821/140‑1 (MQ=255)                   tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAg                                                                                                               <  1:1345764/140‑1 (MQ=255)                   tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAg                                                                                                               <  2:97694/140‑1 (MQ=255)                       gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAC‑AAAAAATGGAGTTgt                                                                                                           >  2:1345764/1‑139 (MQ=255)                       gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGc                                                                                                           <  2:153258/140‑1 (MQ=255)                       gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑AGAACTTTTTCACCAAAAAAC‑AAAAAATGGAGTTGc                                                                                                           >  1:796841/1‑140 (MQ=255)                           aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCatg                                                                                                       <  2:292468/140‑1 (MQ=255)                                tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAg                                                                                                  <  1:690686/140‑1 (MQ=255)                                tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAg                                                                                                  <  1:531016/140‑1 (MQ=255)                                  attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCCGACAAAAAA‑AAAAAAAGGAGTTGCCATGATGAggg                                                                                                >  1:652468/1‑138 (MQ=255)                                  attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAC‑AAAAAAAGGAGGTGCCATGATGAggg                                                                                                >  1:1111649/1‑138 (MQ=255)                                  attcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTTTCTGAAAAAAAC‑AAAAAATCGGGGTGCCATGATGAGCg                                                                                                >  1:700684/1‑140 (MQ=255)                                      ttATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAACCTGGAGTTGCCATGATGAGCGAAAg                                                                                            <  1:553924/140‑1 (MQ=255)                                         ttttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAATAC‑AAAAAATGGAGTTGCCATGATGAGCgaaagaaa                                                                                         >  1:949734/1‑140 (MQ=255)                                          tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGtaat                                                                                        <  1:932929/140‑1 (MQ=255)                                            tCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGtaataa                                                                                      <  2:1137773/140‑1 (MQ=255)                                             cgcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAA‑AAAAAATGGAGGTGCCCTGATGAGCGGAAGgaataaa                                                                                     >  1:219889/1‑139 (MQ=255)                                              gcgTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAC‑AAAAAAATGAGTTGCCCTGATGAGGGAAAGAAAAAAga                                                                                    >  1:1483612/1‑139 (MQ=255)                                                 ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                 <  1:1240972/140‑1 (MQ=255)                                                 ttGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAAc                                                                                 <  2:442698/140‑1 (MQ=255)                                                    aTTCACGAACTGTTAATTACATATTCACTGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                              <  1:549117/140‑1 (MQ=255)                                                    aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGTGAAAGTAATAAGCAACAgg                                                                              <  1:1732583/140‑1 (MQ=255)                                                    aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                              <  2:865842/140‑1 (MQ=255)                                                    aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                              <  1:282811/140‑1 (MQ=255)                                                     ttCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGc                                                                             <  2:696870/140‑1 (MQ=255)                                                              tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGGATTTTTTCAGACAAAAAA‑AAAAAATGGAGTTGCCATGATTAGCGAAAATAATAAACAAAAGGCAGTGAaaaa                                                                    >  1:1625344/1‑140 (MQ=255)                                                              tGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCCGACAAATAC‑AAAAAATGGAGTTGCCATGATGAGCGAAAGTAATAAACAACAGGCAGTGAATaa                                                                    >  1:195314/1‑140 (MQ=255)                                                               gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAg                                                                   <  1:196471/140‑1 (MQ=255)                                                               gTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAg                                                                   <  2:870880/140‑1 (MQ=255)                                                                ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCACACAAAAAA‑AAAAAAAGGAGGTTCCATGATGAGCGGAAGTAATAAAAAAAAAGCAGTGAaaaaag                                                                  >  1:1734837/1‑138 (MQ=255)                                                                ttAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTTTCAGAAAAAAAA‑AAAAAAAGGAGTTGCCATTATGAGCGGAAGAAAAAAAAAAAAAGCAGTGAATaaaa                                                                  >  2:844168/1‑138 (MQ=255)                                                                 tAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGtt                                                                 <  1:743888/140‑1 (MQ=255)                                                                  agacagatatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTg                                                                <  1:505830/134‑1 (MQ=255)                                                                    ttACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGGAATTTTTCAAACAAAAACAAAAAAATGGGGTGGCC‑TGATTAGGGAAAAAAAAAAAAAACAAGCAGTGAAAAAAATGAc                                                              >  2:471176/1‑140 (MQ=255)                                                                        atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAC‑AAAAAATGGAGATGGCATGATGGGCGAAAGGAATAAACAACAAGCAGGGAATAAATTGAAagag                                                          >  2:308399/1‑140 (MQ=255)                                                                         tatTCACGGTGGCAAAAAATATAAAACCCCATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAgaga                                                         <  1:362310/140‑1 (MQ=255)                                                                          atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTTTCAAACAAAAAC‑AAAAAAAGGGGGTGCCCTGATGAGGGAAAGTAAAAAACAAAAAGCAGTGAAAAAAATGACAgagaa                                                        >  2:1074146/1‑139 (MQ=255)                                                                            tCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGAAGTTTGTGGCGG‑TGAATTTTTTTAAACAAAAAA‑AAAAAATGGGGTTGCCATGATGGGGGAAAGAAAAAAAAAAAAGGAAGGGAAAAAATTGAAAAAAATTg                                                      >  2:362310/1‑140 (MQ=255)                                                                             cACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAC‑AAAAAATGGAGTTGGCATGATGAGCGGAAGTAATAAACAACAGGCAATGAAAAAAATGACAGAGATTGt                                                     >  2:1061734/1‑140 (MQ=255)                                                                              aCGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAAATTTTTTAGACAAAAAA‑AAAAAAAGGAGGTGTCATGATGAGCGAAAGGAAAAAAAAAAAAGCAGGGGATAAATTGACAGAGAATGtt                                                    >  2:1292020/1‑139 (MQ=255)                                                                                ggTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAAACAAAAAA‑AAAAACAGGAGTTTGCATGATGAGCGAAAGGAATAAACAAAAAGCAGTGAATAAATTGACAGAGATTGTCGc                                                  >  2:1464804/1‑140 (MQ=255)                                                                                 gTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCt                                                 <  1:624472/140‑1 (MQ=255)                                                                                  tGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAC‑AAAAAAAGGAGTTGGCATGATGAGGGAAAGGAATAAACAAAAAGCAGGGAATAAGTTGACAGAGATTGTCGCTa                                                >  2:1148264/1‑140 (MQ=255)                                                                                   ggCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAA‑AAAAAATGGAGGTGGCATGATGAGCGAAAGTAAAAAAAAAAAAGCAGTGAATAAAATGACAGAGAGTGTctgtct                                               >  2:505830/1‑135 (MQ=255)                                                                                    gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTCAGACAAAAAA‑AAAAAATGGAGTTGGCATGATGAGCGAAAGGAAAAAAAAAAAAGCAGAGAAAAAGATGACAGAGAATGTCGCTaaa                                              >  2:498135/1‑139 (MQ=255)                                                                                       aaaaaaATAAAACCACTTTTTTAGTGGTAGTTTGTGGCGG‑TAAATTTTTCCAGAAAAATAC‑AAAAACGGGAGTTGCCATAATGACCAAAAGTAACAAACAACAGCCAGTGAAAAATTTGACAGAGATTGCCGCTAACttt                                           <  2:1734837/140‑1 (MQ=255)                                                                                              taAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTTTCAACAAAAAC‑AAAAAAATGAGTTGGCATGATGAGGGGAAAGAAAAAACAAAAAGGAGTGAATAAGATGACAGAGAATGTTGCTAAATTTACCGCCa                                    >  2:1091117/1‑140 (MQ=255)                                                                                              aaaaaCCACTTTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGAAAAATAA‑AAAACCGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGATGACAGAGATTGTCGCTAACTTTACCGCCa                                    <  2:1375747/139‑1 (MQ=255)                                                                                              aaaaaCCACATTTTTAGTGGTAGTTTGTGGCGG‑TAAATTTTTCCAGACAAATAC‑AAAAACGGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCa                                    <  2:450232/139‑1 (MQ=255)                                                                                                     acaTTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTc                             <  2:1120592/140‑1 (MQ=255)                                                                                                      caTTTTTAGTGGTAGTTTGTGGCGG‑GGAAATTTTTCAGACAAAAAA‑AAAAAATGGGGTTGGCATGATTAGGGGAAAGAAAAAGCAAAAAGGAGGGAATAAATTGACAGAGATTGTTGCTAACTTTACCGCCCTGAttttt                            >  2:1570515/1‑138 (MQ=255)                                                                                                        tttttAGTGGTAGTTTGTGGCGG‑TGAATTTTTTTAAACAAAAAA‑AAAAAATTGAGGTGGCATTATGGGCGAAAAGAATAAACAAAAAGCAGGGAATAAAATTAAAAAGATTTTCGCTAACTTTACCCCCACGAATTTTAc                          >  2:198102/1‑140 (MQ=255)                                                                                                          tttAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGAAAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTAccc                        <  1:1570515/140‑1 (MQ=255)                                                                                                            tAGTGGTAGTTTGTGGCGG‑TGAATTTTTCAAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGa                      <  2:1540217/140‑1 (MQ=255)                                                                                                              gTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                    <  1:1292020/140‑1 (MQ=255)                                                                                                              gTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAA‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGTTAACTTTACCGCCATGATTTCTACCCGAAt                    <  1:1450716/140‑1 (MQ=255)                                                                                                              gTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGAAAAATAA‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                    <  1:650504/140‑1 (MQ=255)                                                                                                                 gTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGcc                 <  1:198102/140‑1 (MQ=255)                                                                                                                 gTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGcc                 <  1:498135/140‑1 (MQ=255)                                                                                                                    gTTTGTGGCGG‑TGAATTTTTCCAAAAAAATAA‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtga              <  1:1588543/140‑1 (MQ=255)                                                                                                                      ttGTGGCGG‑TGATTTTTTCCAGAAAAATAA‑AAAAACTGGAGTTGCCATGATGAGCAAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGTTTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg            <  2:1111649/140‑1 (MQ=255)                                                                                                                        gtgGCGG‑TGAATTTTTCCAGACAAATAA‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGAc          <  1:1148264/140‑1 (MQ=255)                                                                                                                                 aaaTTTTCCCAGACAAAAAC‑AAAAACTGGAGTTGCCATGATGGGGAAAAGAAAAAAGCAACAGGAAGTGAAAAAGTAGAGAGAGATTGTCGTTATTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa  <  2:1639507/139‑1 (MQ=255)                                                                                                                                         |                                                                                                                                     AACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGG‑TGAATTTTTCCAGACAAATAC‑AAAAACTGGAGTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGA  >  NC_000913/3206300‑3206566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑