Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
JC JC | NC_000913 | 2,129,478 | IS1 (–) +9 bp | coding (165‑173/747 nt) | wcaE ← | putative colanic acid biosynthesis glycosyl transferase |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1978503 = | NA (NA) | 55 (0.810) | 35/276 | 0.8 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
? | NC_000913 | = 2129486 | 0 (0.000) | coding (165/747 nt) | wcaE | putative colanic acid biosynthesis glycosyl transferase | |||||
* | ? | NC_000913 | = 1979270 | NA (NA) | 61 (0.890) | 47/276 | 0.3 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
? | NC_000913 | 2129478 = | 0 (0.000) | coding (173/747 nt) | wcaE | putative colanic acid biosynthesis glycosyl transferase |
ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979135‑1979270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTTGACTATCCCTTCGA > NC_000913/2129478‑2129613 ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGA < 1:558871/140‑1 TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGAT > 2:966068/1‑140 CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCA > 1:957070/1‑140 CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTG < 2:1041730/140‑1 GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAG > 2:238936/1‑140 GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAG < 1:966068/140‑1 GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGAT < 1:238936/140‑1 TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATAC > 2:287971/1‑140 CCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCC < 1:569693/140‑1 CGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCG > 2:130907/1‑140 TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCAGTC > 1:1110023/1‑140 GTAGCTTAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTT > 1:808217/1‑140 GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTT > 2:104506/1‑140 GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGA > 2:1077313/1‑140 CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAA < 1:855623/140‑1 CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAA < 1:511459/140‑1 AACAGGAGGGACAGCTGATAGAAACAGAGGCGACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATGGAGATTTTCCAGATACTCACGGGTGCCGTCTTTGAAACCG < 2:563354/140‑1 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCG > 1:315016/1‑140 AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCG < 2:808217/140‑1 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCAT < 2:284608/140‑1 GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCAT < 1:233187/140‑1 GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACA < 2:360038/140‑1 ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAA > 1:331416/1‑140 CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAAC < 1:338860/140‑1 GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAA > 1:54223/1‑140 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAAT < 2:1082690/140‑1 GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCC > 2:560136/1‑140 GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGACACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCACCATCGACAACAATCC > 2:184689/1‑140 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATT > 2:547260/1‑140 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCATTGGAACCGCCATCGACAA > 2:3443/1‑131 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCATTGGAACCGCCATCGACAA < 1:3443/131‑1 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTC > 1:1098653/1‑140 GAAACAGAAGCCACTGGAGCACCTCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTC < 1:1077313/140‑1 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAG > 2:347762/1‑140 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAG > 1:904980/1‑140 CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAG > 1:860894/1‑140 AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGA < 1:347411/140‑1 TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTT > 1:345293/1‑140 AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCA < 1:547260/140‑1 CCTCAAAAACACCATCATACACTAAATAAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTG > 2:79929/1‑140 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCG < 1:287971/140‑1 ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGC > 2:936417/1‑140 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCG > 1:165324/1‑140 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCG > 2:1045922/1‑140 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCG > 1:279003/1‑140 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCA > 2:1089953/1‑140 TCATACACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCA > 2:476632/1‑140 ACTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGG < 2:441472/140‑1 CTAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGC < 1:105393/140‑1 TAAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCA > 2:648675/1‑140 AAATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCAT < 2:904980/140‑1 AATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATG > 2:262435/1‑140 AATCAGTAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATG > 2:558294/1‑140 TAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTT > 2:273617/1‑140 TAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCAT < 1:69309/133‑1 TAAGTTGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCAT > 2:69309/1‑133 TGGCAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTTGACTA < 1:1045922/140‑1 CAGCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTTGACTATCC > 1:203867/1‑140 GCATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAACCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTTGACTATCCCT > 1:193290/1‑140 CATCACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTTGACTATCCCTT < 2:315016/140‑1 CACCAAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTTGACTATCCCTTCGA > 2:355710/1‑140 ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1979135‑1979270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGATACCATTGAGATTTTCCAGATACTCACGGGTGCCGTCGTTGGAACCGCCATCGACAACAATCCATTCGAAGCTGATATCTTCCACCTGCGCCAGATGCGCCAGCGAGGCATGTGTTTTGACTATCCCTTCGA > NC_000913/2129478‑2129613 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |