Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,188,417	A→G	intergenic (‑3/+13)	yehA ← / ← yehB	putative fimbrial adhesin YehA/putative fimbrial usher protein YehB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,188,417	0	A	G	100.0%	300.3 / NA	77	intergenic (‑3/+13)	yehA/yehB	putative fimbrial adhesin YehA/putative fimbrial usher protein YehB
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (40/37);  total (40/37)

TTGTGTTTGAGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGAACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCATTGGTGCGAATAAA  >  NC_000913/2188283‑2188552                                                                                                                                       |                                                                                                                                        ttGTGTTTGAGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGaccac                                                                                                                                    <  1:537997/140‑1 (MQ=255) ttGTGTTTGAGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGaccac                                                                                                                                    <  1:322493/140‑1 (MQ=255) ttGTGTTTGAGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGaccac                                                                                                                                    <  1:236625/140‑1 (MQ=255)    tgtTTGAGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTg                                                                                                                                 >  2:97922/1‑140 (MQ=255)    tgtTTGAGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTg                                                                                                                                 <  1:120066/140‑1 (MQ=255)          aGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTAtt                                                                                                                           >  1:745614/1‑140 (MQ=255)              aGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTg                                                                                                                       >  1:70266/1‑140 (MQ=255)                tGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGc                                                                                                                     <  2:1115839/140‑1 (MQ=255)                tGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGc                                                                                                                     >  2:1139075/1‑140 (MQ=255)                tGCAAAAT‑CCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGaccac                                                                                                                                    <  1:428756/124‑1 (MQ=255)                tGCAAAAT‑CCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGaccac                                                                                                                                    >  2:428756/1‑124 (MQ=255)                    aaaTCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAat                                                                                                                 <  1:1068419/140‑1 (MQ=255)                    aaaTCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAat                                                                                                                 >  2:43873/1‑140 (MQ=255)                      aTCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAatat                                                                                                               <  2:84912/140‑1 (MQ=255)                          cccTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAAtt                                                                                                           >  2:765382/1‑140 (MQ=255)                               aacaacCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTAc                                                                                                      <  1:97922/140‑1 (MQ=255)                                      aaGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTtcatc                                                                                               <  2:745614/140‑1 (MQ=255)                                         ttGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAAt                                                                                            <  2:70266/140‑1 (MQ=255)                                         ttGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAAt                                                                                            <  2:617010/140‑1 (MQ=255)                                         ttGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAAt                                                                                            <  2:355077/140‑1 (MQ=255)                                            tgCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTtca                                                                                                 <  1:310616/132‑1 (MQ=255)                                            tgCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTtca                                                                                                 >  2:310616/1‑132 (MQ=255)                                            tgCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAAtctc                                                                                         >  1:642379/1‑140 (MQ=255)                                              cTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCtt                                                                                       >  1:531969/1‑140 (MQ=255)                                              cTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCtt                                                                                       >  1:696142/1‑140 (MQ=255)                                                gAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTa                                                                                     <  2:1072527/140‑1 (MQ=255)                                                  aCAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTAcc                                                                                   <  2:564262/140‑1 (MQ=255)                                                   cAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATctct                                                                                        >  1:1065331/1‑134 (MQ=255)                                                   cAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATctct                                                                                        <  2:1065331/134‑1 (MQ=255)                                                      aTAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTTACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAg                                                                               >  1:659824/1‑140 (MQ=255)                                                      aTAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAg                                                                               >  2:1000438/1‑140 (MQ=255)                                                        aaCTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGt                                                                             >  1:615536/1‑140 (MQ=255)                                                          cTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTTACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGa                                                                           <  2:659824/140‑1 (MQ=255)                                                          cTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGa                                                                           <  2:303449/140‑1 (MQ=255)                                                          cTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGa                                                                           <  2:531969/140‑1 (MQ=255)                                                          cTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGa                                                                           <  2:696142/140‑1 (MQ=255)                                                          acagcTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAAAAACATTATGCGAATTTCTATAGAACCAGAAGACAATTAATGGCAAATATAAGTTCTACTTTCATCAATCTCGTTACCGAAGGTGa                                                                           <  2:1125645/136‑1 (MQ=255)                                                           tCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGAt                                                                          >  1:1001581/1‑140 (MQ=255)                                                           tCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGAt                                                                          >  2:854826/1‑140 (MQ=255)                                                                      tGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGaaa                                                               >  2:960546/1‑140 (MQ=255)                                                                       gCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAg                                                              >  2:225673/1‑140 (MQ=255)                                                                       gCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAg                                                              <  2:586512/140‑1 (MQ=255)                                                                       gCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAg                                                              >  1:162040/1‑140 (MQ=255)                                                                         cGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTc                                                            >  1:678880/1‑140 (MQ=255)                                                                         cGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTc                                                            >  1:591267/1‑140 (MQ=255)                                                                          gCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTcc                                                           <  2:591267/140‑1 (MQ=255)                                                                           cATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCt                                                          <  2:877710/140‑1 (MQ=255)                                                                             tAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCttg                                                        <  2:615536/140‑1 (MQ=255)                                                                             tAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCttg                                                        <  2:36659/140‑1 (MQ=255)                                                                             tAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTACATGAAAGTCCttg                                                        >  2:867920/1‑140 (MQ=255)                                                                                  cacaGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCt                                                   >  1:439899/1‑140 (MQ=255)                                                                                        cATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCaa                                             >  2:522917/1‑140 (MQ=255)                                                                                          tAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAAtt                                           >  2:559459/1‑140 (MQ=255)                                                                                            aCCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGc                                         <  2:28586/140‑1 (MQ=255)                                                                                             ccATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGcc                                        <  1:43873/140‑1 (MQ=255)                                                                                                 catcatTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACAt                                    >  2:523850/1‑140 (MQ=255)                                                                                                 catcatTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACAt                                    >  1:185686/1‑140 (MQ=255)                                                                                                   tcatTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTa                                  >  2:283897/1‑140 (MQ=255)                                                                                                    catTAATATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTaa                                 <  1:995689/140‑1 (MQ=255)                                                                                                        aaTATAAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGa                             >  1:277238/1‑140 (MQ=255)                                                                                                           ataAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATgg                          >  1:509315/1‑140 (MQ=255)                                                                                                           ataAATAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATgg                          <  2:179250/140‑1 (MQ=255)                                                                                                              aaTAGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCgg                       <  1:705256/140‑1 (MQ=255)                                                                                                                 aGCATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTAc                    >  1:1024999/1‑140 (MQ=255)                                                                                                                   cATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGTTGGCGGTACtt                  >  2:743103/1‑140 (MQ=255)                                                                                                                   cATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATgg                          >  2:702775/1‑132 (MQ=255)                                                                                                                   cATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATgg                          <  1:702775/132‑1 (MQ=255)                                                                                                                   cATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCgg                       >  2:655202/1‑135 (MQ=255)                                                                                                                   cATTATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCgg                       <  1:655202/135‑1 (MQ=255)                                                                                                                     ttATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCa                >  1:314188/1‑140 (MQ=255)                                                                                                                     ttATGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCa                <  1:565431/140‑1 (MQ=255)                                                                                                                        tGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTAc                    <  2:648881/133‑1 (MQ=255)                                                                                                                        tGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTAc                    >  1:648881/1‑133 (MQ=255)                                                                                                                        tGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCATTg             >  2:527278/1‑140 (MQ=255)                                                                                                                        tGCGAATTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCATTg             >  1:212830/1‑140 (MQ=255)                                                                                                                            aaTTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCATTGGTGc         <  2:212830/140‑1 (MQ=255)                                                                                                                             aTTTCCATAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCATTGGTGCg        >  1:107432/1‑140 (MQ=255)                                                                                                                                   aTAGGACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCATTGGTGCGaataaa  <  2:162040/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                        TTGTGTTTGAGTAAGTGCAAAATCCCCCTGAACAACCAAGTTGTGCTGAACAGATAACTCACTATAACATGCCGCATAGCTCACAGGCATAACCATCATCATTAATATAAATAGCATTATGCGAATTTCCATAGAACCACCTGACTATTACTGGCAAATATAATTTCTACTTTCATCAATCTCTTTACCGAAGGTGATTGTGCATGAAAGTCCTTGTTGCTTATCAATTGCCACATTAACCGATGGCGGTACTTCATTGGTGCGAATAAA  >  NC_000913/2188283‑2188552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑