New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	187918 =	54 (0.740)	4 (0.060)	4/252	6.7	7.7%	coding (733/2673 nt)	glnD	PII uridylyltransferase/uridylyl removing enzyme
	?	NC_000913	188143 =	47 (0.710)					coding (508/2673 nt)	glnD	PII uridylyltransferase/uridylyl removing enzyme
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGGCGAAAGTTGAAGAACAGAACCAGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/188067‑187918 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaacatcgcCAATTAATAAGCGGGATTCGATTAAATTGGTGGCGACGGTTAAATCCGATAACCCTTCCAGCATGCACTCTTCAAGCGTGCGCACGCTATGACCGACTTCCAGCTTTACATCCCAGAGCAGCGTTAACAGCTCGCCCAC  >  NC_000913/188143‑188281                                                                                                                                                                                                                                                                                                   CGGCGAAAGTTGAAGAACAGAACCAGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGC                                                                                                                                                       <  2:723888/140‑1    CGAAAGTTGAAGAACAGAACCAGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCA                                                                                                                                                    >  1:582286/1‑140    CGAAAGTTGAAGAACAGAACCAGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTAGCGCA                                                                                                                                                    >  1:1033272/1‑140                         AGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGCCAATTAATAAGCGG                                                                                                                               >  2:1215959/1‑140                          GCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGCCAATTAATAAGCGGG                                                                                                                              >  2:502854/1‑140                                       TACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGCCAATTAATAAGCGGGATTCGATTAAATT                                                                                                                 <  1:1215959/140‑1                                                           CCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGCCAATTAATAAGCGGGATTCGATTAAATTGGTGGCGACGGTTAAATCCG                                                                                             <  1:502854/140‑1                                                                                                                                            CGCAACATCGCCAATTAATAAGCGGGATTCGATTAAATTGGTGGCGACGGTTAAATCCGATAACCCTTCCAGCATGCACTCTTCAAGCGTGCGCACGCTATGACCGACTTCCAGCTTTACATCCCAGAGCAGCGTTAACA            >  2:897228/1‑140                                                                                                                                                    CGCCAATTAATAAGCGGGATTCGATTAAATTGGTGGCGACGGTTAAATCCGATAACCCTTCCAGCATGCACTCTTCAAGCGTGCGCACGCTATGACCGACTTCCAGCTTTACATCCCAGAGCAGCGTTAACAGCTCGCCC    >  1:1023759/1‑140                                                                                                                                                      CCAATTAATAAGCGGGATTCGATTAAATTGGTGGCGACGGTTAAATCCGATAACCCTTCCAGCATGCACTCTTCAAGCGTGCGCACGCTATGACCGACTTCCAGCTTTACATCCCAGAGCAGCGTTAACAGCTCGCCCAC  >  1:27997/1‑140                                                                                                                                                                                                                                                                                                   CGGCGAAAGTTGAAGAACAGAACCAGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/188067‑187918 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaacatcgcCAATTAATAAGCGGGATTCGATTAAATTGGTGGCGACGGTTAAATCCGATAACCCTTCCAGCATGCACTCTTCAAGCGTGCGCACGCTATGACCGACTTCCAGCTTTACATCCCAGAGCAGCGTTAACAGCTCGCCCAC  >  NC_000913/188143‑188281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.