Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,926,366	0	A	C	23.3%	169.6 / 10.1	73	G30G (GGT→GGG)	mioC	flavoprotein MioC
Reads supporting (aligned to +/- strand):  ref base A (42/14);  new base C (0/17);  total (42/31)
Fisher's exact test for biased strand distribution p-value = 1.50e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAA  >  NC_000913/3926227‑3926498                                                                                                                                             |                                                                                                                                      tCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTaaaa                                                                                                                                       >  2:380249/1‑140 (MQ=255)     ttCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCg                                                                                                                                  <  1:1092046/140‑1 (MQ=255)       ccTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAC‑CCCGcc                                                                                                                                <  2:433037/140‑1 (MQ=255)             aTGCTTCATAGAAAGGAGAAAGGTTGCCCGAAATATCTCCGGCACCGGGGGTGGGGCTGATAACCAGCCAGACCCCTGAGGCAGGAAAATCTTCTAACAGCGG‑ACCGGGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTcc                                                                                                                          <  2:885278/140‑1 (MQ=255)              tGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCa                                                                                                                         <  2:564256/140‑1 (MQ=255)                cTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGc                                                                                                                       >  1:409809/1‑140 (MQ=255)                    aTAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCtttt                                                                                                                   <  2:557110/140‑1 (MQ=255)                      agaaaggagaaagtTTTCCCGGATTACCCCGGGCGGGGTGGGTGGAGCGGTAAACCAGCGAGATCCCGGAGGCAGTTAAATCTT‑TAAAAGGGGCACGGGGACGCTTTTCGGTGTAAAAA‑CCCGCCTCTTCCAGCTTTTCa                                                                                                                 <  2:486494/140‑1 (MQ=255)                         aaggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAAAAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGcc                                                                                                              <  1:819493/140‑1 (MQ=255)                          aggagaaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCa                                                                                                             >  2:81558/1‑140 (MQ=255)                               aaaggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGgtgt                                                                                                        >  1:1057098/1‑140 (MQ=255)                                aaggTTGCCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGtt                                                                                                       <  2:75524/140‑1 (MQ=255)                                 aggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTc                                                                                                      <  2:994959/140‑1 (MQ=255)                                  ggTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCt                                                                                                     <  2:1057098/140‑1 (MQ=255)                                      gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                 >  2:602842/1‑140 (MQ=255)                                      gTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTa                                                                                                 >  2:1182655/1‑140 (MQ=255)                                       tCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTAc                                                                                                >  2:728289/1‑140 (MQ=255)                                       cccGGAATATCTCCGGCACCGTGGGTGGAGCTGATACCCAGCAAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑CCCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTAc                                                                                                <  1:1040161/139‑1 (MQ=255)                                            aaTATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATAtt                                                                                           >  1:593315/1‑140 (MQ=255)                                             atatCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAg                                                                                                            >  1:668853/1‑122 (MQ=255)                                             atatCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAg                                                                                                            <  2:668853/122‑1 (MQ=255)                                              tatCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCg                                                                                         >  2:767771/1‑140 (MQ=255)                                              tatCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCg                                                                                         >  2:767010/1‑140 (MQ=255)                                                 ctcCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCa                                                                                      >  1:225422/1‑140 (MQ=255)                                                  cccGGCCCGGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑CCCGGGCGGCGTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAc                                                                                     <  2:409809/139‑1 (MQ=255)                                                   ccGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAcc                                                                                    >  2:831216/1‑140 (MQ=255)                                                    cGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccg                                                                                   >  1:676342/1‑140 (MQ=255)                                                      gCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCAccgcc                                                                                 >  1:419927/1‑140 (MQ=255)                                                        aCCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGa                                                                               <  1:130592/140‑1 (MQ=255)                                                            tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAgggg                                                                           >  2:329097/1‑139 (MQ=255)                                                            tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAgggg                                                                           >  1:1214448/1‑139 (MQ=255)                                                            tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                           >  1:979545/1‑140 (MQ=255)                                                            tgggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGt                                                                           >  2:701366/1‑140 (MQ=255)                                                              ggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGtgc                                                                         >  1:872272/1‑140 (MQ=255)                                                              ggtggAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGtgc                                                                         >  1:393457/1‑140 (MQ=255)                                                                  gAGCTGAAAACCAGCCAGACCCCTGGGGCAGGTAAATCTTCAAACAGCGG‑CCGGGGCAGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGcc                                                                     <  2:88067/140‑1 (MQ=255)                                                                   ggCTGATACCCAGCCAGACCCCTGGGGAGGGTAAATCTTCTAACAGCGG‑CCGGTGCGGCGTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCg                                                                    <  2:177327/139‑1 (MQ=255)                                                                    gCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGc                                                                   >  1:26152/1‑140 (MQ=255)                                                                        aTACCCAGCCAGACCCCTGAGGCAGGAAAATCTTCTAACAGCGG‑CCGGGGCAGCTTTTCGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                               <  2:953817/140‑1 (MQ=255)                                                                        aTAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                               >  1:771793/1‑140 (MQ=255)                                                                        aTAACCAGCCAGATCCCTGAGGCAGGAAAATCTTCAAACAGCGG‑CCCGTGAAGGTTTTCGGGGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGAt                                                               <  2:706605/140‑1 (MQ=255)                                                                         aacccagccagACCCTTGAGGCAGGAAAATTTTCTACCAGCGG‑CCGGTGCGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATa                                                              <  2:225422/137‑1 (MQ=255)                                                                         aacccagccaaATCCCGGGGGCAGTTAATTTTTCTAACGGCGG‑CCCGTGAAGCTTTCCGGGGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATa                                                              <  2:979545/137‑1 (MQ=255)                                                                          acccacccagTCCCGTGAGGCAGTAAATTTTTAAAACAGCGG‑ACGGTGCGGCGTTTGGGTGAAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATaa                                                             <  2:419927/138‑1 (MQ=255)                                                                               gccagATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTg                                                        >  1:953817/1‑140 (MQ=255)                                                                                   gaccccGGAGGCGGGTAAATTTTCTAACAGGGG‑CCGGGGCGGCTTTTGGGTGGAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGatat                                                    <  2:872272/137‑1 (MQ=255)                                                                                    aTCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATc                                                   >  2:479212/1‑140 (MQ=255)                                                                                    aTCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATc                                                   >  1:377304/1‑140 (MQ=255)                                                                                              cAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAAc                                         >  1:1188856/1‑140 (MQ=255)                                                                                              cAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAAc                                         >  1:316252/1‑140 (MQ=255)                                                                                                ggTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                       >  2:314425/1‑140 (MQ=255)                                                                                                ggTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCg                                       >  1:125630/1‑140 (MQ=255)                                                                                                 gaaattcttcaACCAGCGG‑CCGGTGAAGGTTTTCGGTGATAAAG‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTTTTCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                      <  2:875873/135‑1 (MQ=255)                                                                                                 gTAAATCTTCTAACAGCGG‑CCCGTGCAGCGTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                      <  1:730269/140‑1 (MQ=255)                                                                                                 gTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                      >  1:353152/1‑140 (MQ=255)                                                                                                 gTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                      >  1:360697/1‑140 (MQ=255)                                                                                                 gTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                      >  2:724721/1‑140 (MQ=255)                                                                                                    attctcttAACGGCGA‑CCCGTGCGGC‑TTTCGGGTGTAAAACCCCGCCTCTTCCAGCTTTTCACCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCAc                                   <  2:417153/133‑1 (MQ=255)                                                                                                         tctAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGCGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTtta                              >  1:875873/1‑140 (MQ=255)                                                                                                           tAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                      >  2:1175285/1‑130 (MQ=255)                                                                                                           tAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGc                                      <  1:1175285/130‑1 (MQ=255)                                                                                                           tAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTttatt                            >  2:1179317/1‑140 (MQ=255)                                                                                                               aGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAaga                        >  2:509371/1‑140 (MQ=255)                                                                                                                  gg‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                     >  2:719064/1‑140 (MQ=255)                                                                                                                  gg‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                     >  1:520725/1‑140 (MQ=255)                                                                                                                  gg‑ACCGTGCAGCGTTTCGGTGGAAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTg                     <  1:831216/140‑1 (MQ=255)                                                                                                                     ccggTGCAGCTTTTCGGTGGTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGGGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                   <  1:565180/137‑1 (MQ=255)                                                                                                                     cccGTGCAGCTTTTGGGTGTTAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGc                   <  1:440329/139‑1 (MQ=255)                                                                                                                        gTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTa                >  1:16895/1‑140 (MQ=255)                                                                                                                             gCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTa           <  1:701366/140‑1 (MQ=255)                                                                                                                             gCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTa           >  1:1128899/1‑140 (MQ=255)                                                                                                                              tttttGGGTGTAAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc          <  2:771793/138‑1 (MQ=255)                                                                                                                              cGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTAc          >  1:210992/1‑140 (MQ=255)                                                                                                                                   cGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCtgt     >  2:473803/1‑140 (MQ=255)                                                                                                                                     gtggtAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGa   <  1:1179317/140‑1 (MQ=255)                                                                                                                                     gtggtAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGa   <  1:509371/140‑1 (MQ=255)                                                                                                                                     gtggaAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGa   <  2:26152/140‑1 (MQ=255)                                                                                                                                      tggtAAAC‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGaa  <  1:767010/140‑1 (MQ=255)                                                                                                                                             |                                                                                                                                      TCTGTTCCTGCAATGCTTCATAGAAAGGAGAAAGGTTGTCCGGAATATCTCCGGCACCGTGGGTGGAGCTGATAACCAGCCAGATCCCTGAGGCAGGTAAATCTTCTAACAGCGG‑ACCGTGCAGCGTTTCGGTGGTAAAA‑CCCGCCTCTTCCAGCTTTTCAGCCAGGTGTTCTGCTACATATTCGGCACCGCCGAGGGTGCTGCCGCTGATAAGAGTGATATCTGCCATAAACCGCCACCTTTATTAAGAGTGGCGTATTGTACGCTGTGAA  >  NC_000913/3926227‑3926498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑