Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,503,153 C→T P272S (CCG→TCG)  frlC → fructoselysine 3‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,503,1530CT98.8% 291.0 / NA 83P272S (CCG→TCG) frlCfructoselysine 3‑epimerase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (47/35);  minor base G (1/0);  total (48/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCATACAGC  >  NC_000913/3503017‑3503287
                                                                                                                                        |                                                                                                                                      
gCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCgg                                                                                                                                     <  2:1040866/140‑1 (MQ=255)
     tGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGAt                                                                                                                                <  1:846812/140‑1 (MQ=255)
       cGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCg                                                                                                                                      >  1:256007/1‑132 (MQ=255)
       cGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATga                                                                                                                              >  2:1236401/1‑140 (MQ=255)
        gggAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATgag                                                                                                                             <  1:100062/140‑1 (MQ=255)
        gggAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATgag                                                                                                                             <  2:840297/140‑1 (MQ=255)
                aTGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGAt                                                                                                                                <  1:239996/129‑1 (MQ=255)
                aTGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGAt                                                                                                                                >  2:239996/1‑129 (MQ=255)
                  gcgcGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAAc                                                                                                                   <  1:1084945/140‑1 (MQ=255)
                          ttattGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATgag                                                                                                                             <  1:181037/122‑1 (MQ=255)
                          ttattGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATgag                                                                                                                             >  2:181037/1‑122 (MQ=255)
                                  cGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGc                                                                                                   >  2:104821/1‑140 (MQ=255)
                                  cGGGGCTATGAGGGTTACTGTACGGTGGAGCTGATGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGc                                                                                                   >  2:973195/1‑140 (MQ=255)
                                    gggCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGa                                                                                                 >  2:739422/1‑140 (MQ=255)
                                    gggCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGa                                                                                                 >  2:617740/1‑140 (MQ=255)
                                     ggCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTg                                                                                                               <  1:904550/125‑1 (MQ=255)
                                     ggCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTg                                                                                                               >  2:904550/1‑125 (MQ=255)
                                               gTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCg                                                                                      >  1:110247/1‑140 (MQ=255)
                                               gTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCg                                                                                      >  1:480251/1‑140 (MQ=255)
                                                  aCTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGata                                                                                   >  2:242576/1‑140 (MQ=255)
                                                  aCTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGata                                                                                   >  2:475112/1‑140 (MQ=255)
                                                   cTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGatat                                                                                  <  2:374464/140‑1 (MQ=255)
                                                        cGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                                                             >  2:682105/1‑140 (MQ=255)
                                                        cGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                                                             <  2:110247/140‑1 (MQ=255)
                                                        cGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                                                             >  1:859369/1‑140 (MQ=255)
                                                        cGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                                                             <  1:242576/140‑1 (MQ=255)
                                                           tGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACt                                                                                            <  2:359867/122‑1 (MQ=255)
                                                           tGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACt                                                                                            >  1:359867/1‑122 (MQ=255)
                                                             gAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCaa                                                                        <  1:1236401/140‑1 (MQ=255)
                                                              aGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAAc                                                                       >  1:675109/1‑140 (MQ=255)
                                                              aGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAAc                                                                       <  2:917297/140‑1 (MQ=255)
                                                              aGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGGCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAAc                                                                       >  2:493337/1‑140 (MQ=255)
                                                                cTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTg                                                                     >  2:835000/1‑140 (MQ=255)
                                                                cTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTg                                                                     >  1:299454/1‑140 (MQ=255)
                                                                cTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTg                                                                     >  1:149866/1‑140 (MQ=255)
                                                                   gTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAAt                                                                  >  2:461668/1‑140 (MQ=255)
                                                                    tGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATa                                                                 <  2:149866/140‑1 (MQ=255)
                                                                     gACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATaa                                                                >  2:19195/1‑140 (MQ=255)
                                                                          tGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGt                                                           >  2:376146/1‑140 (MQ=255)
                                                                          tGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGt                                                           >  1:893866/1‑140 (MQ=255)
                                                                              tatGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTc                                                       <  2:480251/140‑1 (MQ=255)
                                                                              tatGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTc                                                       <  2:675109/140‑1 (MQ=255)
                                                                                  aaCGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGc                                                   >  1:290449/1‑140 (MQ=255)
                                                                                    cGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCgg                                                 >  1:180979/1‑140 (MQ=255)
                                                                                    cGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCgg                                                 >  2:821912/1‑140 (MQ=255)
                                                                                    cGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCgg                                                 <  2:180979/140‑1 (MQ=255)
                                                                                    cGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTCCTGGCgg                                                 >  1:973976/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  2:502264/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  1:1043653/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  1:1082804/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  2:540023/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  1:381118/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  1:488275/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  2:129057/1‑140 (MQ=255)
                                                                                      aGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa                                               >  2:1093877/1‑140 (MQ=255)
                                                                                        cccAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAAt                                             >  1:69941/1‑140 (MQ=255)
                                                                                          cAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGc                                           <  2:1126384/140‑1 (MQ=255)
                                                                                           aGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCg                                          <  1:973195/140‑1 (MQ=255)
                                                                                            gACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCgg                                         >  1:904633/1‑140 (MQ=255)
                                                                                             aCTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGt                                        <  2:1082804/140‑1 (MQ=255)
                                                                                                  aTGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAtg                                   >  1:1185103/1‑140 (MQ=255)
                                                                                                  aTGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAtg                                   <  2:1185103/140‑1 (MQ=255)
                                                                                                     cccGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTgg                                <  1:739422/140‑1 (MQ=255)
                                                                                                     cccGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTgg                                >  1:417461/1‑140 (MQ=255)
                                                                                                      ccGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGc                               >  1:1096476/1‑140 (MQ=255)
                                                                                                       cGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCg                              <  2:290449/140‑1 (MQ=255)
                                                                                                       cGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCg                              <  1:1093877/140‑1 (MQ=255)
                                                                                                        gCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCgg                             >  2:74337/1‑140 (MQ=255)
                                                                                                         ccAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGt                                        >  1:1018564/1‑128 (MQ=255)
                                                                                                         ccAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGt                                        <  2:1018564/128‑1 (MQ=255)
                                                                                                         ccAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAtg                                   <  2:396988/133‑1 (MQ=255)
                                                                                                         ccAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAtg                                   <  2:391848/133‑1 (MQ=255)
                                                                                                         ccAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAtg                                   >  1:396988/1‑133 (MQ=255)
                                                                                                         ccAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAtg                                   >  1:391848/1‑133 (MQ=255)
                                                                                                         ccAGGCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGgt                            >  1:153610/1‑140 (MQ=255)
                                                                                                            ggCGCTGGAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTCCTGGCGGTAATGCGGTCAATGTGGCGGTGTa                         <  2:973976/140‑1 (MQ=255)
                                                                                                                   gAACGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACt                  <  2:467203/140‑1 (MQ=255)
                                                                                                                     aCGCTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCg                <  1:74337/140‑1 (MQ=255)
                                                                                                                        cTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCg                <  2:679970/137‑1 (MQ=255)
                                                                                                                        cTTTCGCGCGCTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCg                >  1:679970/1‑137 (MQ=255)
                                                                                                                             gcgcgcTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCa        <  2:417461/140‑1 (MQ=255)
                                                                                                                                cgcTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCATAc     <  1:527880/140‑1 (MQ=255)
                                                                                                                                cgcTGCTGTCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCATAc     <  2:904633/140‑1 (MQ=255)
                                                                                                                                   tgctgtCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCATACAGc  >  2:1186618/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                      
GCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCATACAGC  >  NC_000913/3503017‑3503287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: