Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,641,041	C→A	intergenic (‑456/+298)	essQ ← / ← cspB	Qin prophage; putative S lysis protein/Qin prophage; cold shock‑like protein CspB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,641,041	0	C	A	100.0%	233.2 / NA	67	intergenic (‑456/+298)	essQ/cspB	Qin prophage; putative S lysis protein/Qin prophage; cold shock‑like protein CspB
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (42/25);  total (42/25)

CAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAG  >  NC_000913/1640904‑1641177                                                                                                                                          |                                                                                                                                         cAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAacc                                                                                                                                        <  2:587714/140‑1 (MQ=255)   aaaaGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGc                                                                                                                                      <  2:1201197/140‑1 (MQ=255)        gTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAg                                                                                                                                 <  1:358326/140‑1 (MQ=255)         tGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGc                                                                                                                                <  2:1087818/140‑1 (MQ=255)         tGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGc                                                                                                                                >  2:2129026/1‑140 (MQ=255)           cccTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCgg                                                                                                                              >  1:1798345/1‑140 (MQ=255)                      tGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATtg                                                                                                                   <  1:1106529/140‑1 (MQ=255)                             aTTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCt                                                                                                            >  2:2027653/1‑140 (MQ=255)                             aTTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCt                                                                                                            >  2:1168664/1‑140 (MQ=255)                                  aacaaAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTtg                                                                                                       <  1:2027653/140‑1 (MQ=255)                                  aacaaAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTtg                                                                                                       >  1:1639015/1‑140 (MQ=255)                                  aacaaAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTtg                                                                                                       <  2:1281738/140‑1 (MQ=255)                                   acaaAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTtgt                                                                                                      <  1:1134026/140‑1 (MQ=255)                                       aGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCTCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGa                                                                                                  >  1:519187/1‑140 (MQ=255)                                       aGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGa                                                                                                  >  1:1075522/1‑140 (MQ=255)                                                   aaaTCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCa                                                                                              <  1:1051716/132‑1 (MQ=255)                                                   aaaTCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCa                                                                                              >  2:1051716/1‑132 (MQ=255)                                                   aaaTCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTa                                                                                      >  2:379844/1‑140 (MQ=255)                                                   aaaTCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTa                                                                                      <  2:1639015/140‑1 (MQ=255)                                                   aaaTCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTa                                                                                      <  2:1502116/140‑1 (MQ=255)                                                                gTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGtttt                                                                         >  2:1448877/1‑140 (MQ=255)                                                                 tAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtg                                                                        >  2:896663/1‑140 (MQ=255)                                                                 tAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtg                                                                        >  2:2103429/1‑140 (MQ=255)                                                                 tAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtg                                                                        >  2:1994175/1‑140 (MQ=255)                                                                        attgattTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtgccatgcc                                                                 <  1:2095589/140‑1 (MQ=255)                                                                        attgattTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtgccatgcc                                                                 >  2:566085/1‑140 (MQ=255)                                                                        attgattTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtgccatgcc                                                                 >  1:1305392/1‑140 (MQ=255)                                                                        attgattTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtgccatgcc                                                                 <  1:1339114/140‑1 (MQ=255)                                                                        attgattTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTtgccatgcc                                                                 >  1:184275/1‑140 (MQ=255)                                                                           gattTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCcagc                                                              >  2:992147/1‑140 (MQ=255)                                                                                     gTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTc                                                    <  1:986892/140‑1 (MQ=255)                                                                                            gTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTa                                             >  1:418570/1‑140 (MQ=255)                                                                                                           taataaTATATTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATgcag                              <  2:1075522/140‑1 (MQ=255)                                                                                                                   tatTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTg                      <  2:184275/140‑1 (MQ=255)                                                                                                                   tatTTAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTg                      <  2:1798345/140‑1 (MQ=255)                                                                                                                       tAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATgcag                              <  2:479771/128‑1 (MQ=255)                                                                                                                       tAAAGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATgcag                              >  1:479771/1‑128 (MQ=255)                                                                                                                        aaaGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACtt                 <  1:2129026/140‑1 (MQ=255)                                                                                                                        aaaGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACtt                 <  1:2103429/140‑1 (MQ=255)                                                                                                                        aaaGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACtt                 >  2:1804189/1‑140 (MQ=255)                                                                                                                        aaaGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACtt                 >  2:1677501/1‑140 (MQ=255)                                                                                                                          aGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTca               >  2:34565/1‑140 (MQ=255)                                                                                                                          aGCAGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTca               >  2:689055/1‑140 (MQ=255)                                                                                                                             aGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCa                    >  1:1139893/1‑132 (MQ=255)                                                                                                                             aGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCa                    <  2:1139893/132‑1 (MQ=255)                                                                                                                             aGATAATAAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTcacca            >  1:56243/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAAc                         >  1:735644/1‑125 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAAc                         <  2:735644/125‑1 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTca               >  2:1871476/1‑135 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTca               <  1:1871476/135‑1 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  2:619969/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  2:605613/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  2:6454/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  1:1126940/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  1:1883473/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  1:763529/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          <  1:896663/140‑1 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  2:2036062/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  1:1278872/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  1:609386/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  2:1048279/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  2:1658899/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  2:1655594/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  1:485418/1‑140 (MQ=255)                                                                                                                               ataataAAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACcaca          >  1:1419788/1‑140 (MQ=255)                                                                                                                                   taaAAAAACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGG‑GTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGt     >  2:184645/1‑140 (MQ=255)                                                                                                                                    aaaaaaACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGt     <  1:566085/140‑1 (MQ=255)                                                                                                                                      aaaaACCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGG‑GTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAg  <  1:184645/140‑1 (MQ=255)                                                                                                                                       aaaaCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAg  <  1:1804189/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                         CAAAAAGGTGCCCTTTTGATCTGCCCTCATTGCAACAAAGTATTCCAGACAAATCTTAAAGCTGTAGCCTGATTGATTTTATTAGTAACAAGTATTTTTTATATTTTAATAATATATTTAAAGCAGATAATAAAAAACCCGCCTGAGCGGGTTTGAGATTGTGGTGCTTTTTGTGGGAGTCATCCACTTACGCACTTTGTTTTGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAG  >  NC_000913/1640904‑1641177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑