| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,568,504 | 0 | T | G | 25.6% | 153.9 / 11.7 | 82 | T6P (ACC→CCC) | mdtM | multidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter |
| Reads supporting (aligned to +/- strand): ref base T (16/45); new base G (21/0); total (37/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATC > NC_000913/4568371‑4568640 | gCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaa > 2:1145624/1‑140 (MQ=255) aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTg < 2:1072747/140‑1 (MQ=255) aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGaaaaaaaagag > 1:855694/1‑136 (MQ=255) gACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCa < 1:568645/140‑1 (MQ=255) aCATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaaaag > 1:1251291/1‑132 (MQ=255) aCATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACg < 2:1251291/134‑1 (MQ=255) cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATa < 1:596137/140‑1 (MQ=255) cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATa > 2:410031/1‑140 (MQ=255) tCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATaac < 2:1119102/140‑1 (MQ=255) cGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATaaca < 2:848615/140‑1 (MQ=255) aaaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑Tc < 2:1148000/140‑1 (MQ=255) aaaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACATGGCATAACAaaaaacac > 2:169507/1‑138 (MQ=255) aaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑Tcc < 1:122851/140‑1 (MQ=255) tACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCg < 1:410031/140‑1 (MQ=255) ccACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGga < 1:314933/140‑1 (MQ=255) cacaTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGga‑g > 1:280043/1‑140 (MQ=255) tAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGGATAACAAAAAAA‑ACCTTGTCCCGA‑GAAccc > 2:963574/1‑140 (MQ=255) aTGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCa < 1:429318/140‑1 (MQ=255) tGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCaa < 2:1045435/140‑1 (MQ=255) tGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGGAAAACAAACAAA‑ACCCTGTCCCGG‑CAAcccccc > 2:429318/1‑138 (MQ=255) cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACggg > 1:734097/1‑140 (MQ=255) cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGGGGCATAAAAAAAAAC‑TCCTTGTCCCGA‑GAACCCCAACggg > 2:361303/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAAAAAAAAAC‑TCCTTGTCCGGA‑GAAACCCCACgggg > 2:872115/1‑140 (MQ=255) ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAC‑TACCTTTCCGGA‑GAACCCCCACgggg > 2:1204332/1‑140 (MQ=255) cAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGa < 2:632789/140‑1 (MQ=255) cAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGa < 1:809620/140‑1 (MQ=255) ggCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAACACCCTTTCCCGGG‑AAACCCCACCGGGGaa > 2:1079620/1‑140 (MQ=255) gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGAGGCATAAAAAACAAC‑TCCTCGTCCCGACGAACCCAAAGAGGGaaa > 2:388896/1‑140 (MQ=255) gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAACAAACAAC‑TCCTTTTTCGGG‑GGACCCCAACGGGGgaaa > 2:616658/1‑140 (MQ=255) gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAACAAAAAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGaaaa > 1:140089/1‑140 (MQ=255) tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACg < 1:1145624/140‑1 (MQ=255) tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACg < 1:635877/140‑1 (MQ=255) tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACg < 2:280043/140‑1 (MQ=255) gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGaa > 1:389383/1‑140 (MQ=255) gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGCATAACAAAAAAA‑TCCTTGTCCGGA‑GAACCCCAACGGGGGAAAAGaa > 1:1170799/1‑140 (MQ=255) gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAC‑TCCTTTTCCGGG‑GAACCCCCACGGGGGAAAAGaa > 2:696694/1‑140 (MQ=255) gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAACAGGCATAACAAAAAAC‑TCCTTGTCCGGA‑GAAGCCCCAAGGGGAAAAAGaa > 2:373074/1‑140 (MQ=255) gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAGGGCATAACAAAAAAC‑TCCCTTTCCGGG‑GAACCCCCACGGGGGAAACGaa > 2:635877/1‑140 (MQ=255) aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGaaa < 2:1069278/140‑1 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAAAAAAAAAC‑ACCTTTTTCGGA‑GAAACCCCACGGGGGAAAAGaaaattaa > 2:1304561/1‑135 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGGATAAAAAAAAAC‑TCCTTGTCCGGA‑GAACCCCCACGGGGGAAAAGAAAATCaa > 2:585419/1‑140 (MQ=255) aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAGGGGATAAAAAACAAA‑TCCCTGTCCGGG‑GGAACCCAACGGGGGAAACCaaaattaa > 2:543021/1‑135 (MQ=255) gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATAcc < 2:1096192/140‑1 (MQ=255) tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGGGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCCAACGGGAAAACGAAAATCAAAAccc > 2:1169188/1‑139 (MQ=255) tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAATGGCATAAAAAAAAAC‑TCCTTGTCCGGA‑GAACCCCCAAGGGGGAAAAGAAAATTAAAAccc > 2:1045108/1‑139 (MQ=255) cGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGt < 1:543021/140‑1 (MQ=255) aCAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCg < 1:1333839/140‑1 (MQ=255) aGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAAt > 1:707445/1‑131 (MQ=255) aGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAAt < 2:707445/131‑1 (MQ=255) aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGCATAACAAACAAC‑TCCTTTTCCGGA‑GAACCCCCACGGGGAAAAAGAAAATCAATACCGTCGGGaa > 1:710782/1‑140 (MQ=255) cGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATCCCGTCGGTAATGa < 1:1247007/140‑1 (MQ=255) cGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAAAAAAAAAA‑TCCTTGTCCGGG‑GAACCCCCACGGGGGAAAAGAAAATCAAAAACGTCGGGAATGa > 2:899773/1‑140 (MQ=255) cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg < 1:1251440/140‑1 (MQ=255) cagcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACg < 1:581657/140‑1 (MQ=255) aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg < 1:696694/140‑1 (MQ=255) aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg < 1:26972/140‑1 (MQ=255) aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg < 1:616658/140‑1 (MQ=255) aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGAGGCATAACAAAAAAA‑TCCTTTTCCGGA‑GGACCCCAACAGGGAAAAAAAAATTCAAAACCGTCGGtgatgagaaaaag > 2:1251440/1‑133 (MQ=255) aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAACAGGCAAAAAAAACAAC‑TCCCTCTTCCGA‑GAACCCCAACAGGGGAAACGAAAATTAAAACCGTCCGGAATGACGaaaag > 2:581657/1‑138 (MQ=255) tCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAg < 1:362389/140‑1 (MQ=255) cATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAAGGGGATAACAAAAAAC‑TCCCTGTCCCGG‑GAACCCCCACCGGGGAAACAAAAATCCATAACCCCGGCAATGAAGAAAGGCAgg > 2:74370/1‑140 (MQ=255) aTACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGt < 1:169507/140‑1 (MQ=255) aTACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGt < 1:899773/140‑1 (MQ=255) aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga < 1:373074/140‑1 (MQ=255) tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAggg > 1:783424/1‑140 (MQ=255) tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGCGGCATAAAAAAAAAC‑TCCTTTTCCGGA‑GAACCCCAACGGGGGAAACGAAAATCAATACCCTCGGGAATGACGAAAAGCAGGGGAGAAggg > 2:976505/1‑140 (MQ=255) tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAACAAC‑TCCTTTTCCGGA‑GAACCCCAACGGGGGAAACGAAATTCAATACCGTCGGGAATGACGAAAGGCAGGTGAGAAggg > 1:46646/1‑140 (MQ=255) cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAAc < 2:734097/140‑1 (MQ=255) cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAAC‑TCCTTGTTCGGA‑GAACCCCAACGGGGGAAACGAAAATAAAAAACCCCGGTGATGACGAAAGGGAAGTGAGAAGGGCaaa > 2:1232481/1‑139 (MQ=255) ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga < 1:976505/140‑1 (MQ=255) ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga < 1:388896/140‑1 (MQ=255) ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga < 1:722786/140‑1 (MQ=255) cATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACgag < 2:1308060/140‑1 (MQ=255) aTCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGGATAAAAAACAAC‑TCCTTTTCCGGG‑GAAACCCCACGGGGGAAAAGAAAATCAATAACGTCGGGAATGACGAAAAGCAGGGGGGAAGGGGAACgaga > 2:470361/1‑140 (MQ=255) aTCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAAA‑TCCTTGTCCGGA‑GAACCCCAACGGGGGAAAAGAAAATCAATACCGTCGGGAATGACGAAAAGCAGGGGAGAAGGGCAACgaga > 2:524096/1‑140 (MQ=255) aTCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAC‑TCCTTGTCCGGA‑GAACCCCCACGGGGGAAAAGAAAATCAAAACCGTCGGGAATGACGAAAAGCAGGGGGGAAAGGGAACgaga > 2:38469/1‑140 (MQ=255) ggAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGc < 1:872115/140‑1 (MQ=255) aaaaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCaa < 2:389383/140‑1 (MQ=255) aaCAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAC‑TCCTTGTCCGGA‑GAAACCCAACGGGGGAAACGAAAATCAATAACGTCGGGAATGACG‑AAGGCAGGGGAGAAGGGGAACGAGACTGCAAAAGt > 2:1011410/1‑140 (MQ=255) cAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTa < 1:1304561/140‑1 (MQ=255) gCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACt < 2:1170799/140‑1 (MQ=255) gCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGATGAGAAGGGCAACGAGACTGCAAATGTACt < 2:855694/140‑1 (MQ=255) gcATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCa < 1:1079620/140‑1 (MQ=255) tGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAAACCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGt > 1:161194/1‑140 (MQ=255) gggTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATc < 2:783424/140‑1 (MQ=255) gggTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATc < 1:1232481/140‑1 (MQ=255) | GCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAAC‑TCCTTGTCCGGA‑GAACCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAATC > NC_000913/4568371‑4568640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |