Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	393,796	A→G	pseudogene (827/1449 nt)	yaiT →	putative autotransporter YaiT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	393,796	0	A	G	100.0%	316.6 / NA	82	pseudogene (827/1449 nt)	yaiT	putative autotransporter YaiT
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (40/42);  total (40/42)

TGGTAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGACATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGCAACC  >  NC_000913/393659‑393932                                                                                                                                          |                                                                                                                                         tggtAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCa                                                                                                                                        >  2:956229/1‑140 (MQ=255)   gtAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTACAGGCTTCGCTAAAGGTGGCatg                                                                                                                                      <  2:1111211/140‑1 (MQ=255)    tAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCatga                                                                                                                                     <  2:1215975/140‑1 (MQ=255)           aaCGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCg                                                                                                                              >  2:310020/1‑140 (MQ=255)                cGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTg                                                                                                                         >  2:88721/1‑140 (MQ=255)                cGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTg                                                                                                                         >  2:870457/1‑140 (MQ=255)                cGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTg                                                                                                                         >  1:244062/1‑140 (MQ=255)                  aCAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGt                                                                                                                       >  1:712352/1‑140 (MQ=255)                      cGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAgg                                                                                                                   <  1:901897/140‑1 (MQ=255)                      cGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAgg                                                                                                                   <  2:1276535/140‑1 (MQ=255)                      cGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAgg                                                                                                                   <  2:244062/140‑1 (MQ=255)                      cGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAgg                                                                                                                   <  2:416047/140‑1 (MQ=255)                        gCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAgg                                                                                                                   <  1:953845/138‑1 (MQ=255)                        gCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAgg                                                                                                                   >  2:953845/1‑138 (MQ=255)                         cACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTgg                                                                                                                >  1:1237537/1‑140 (MQ=255)                          aCCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGa                                                                                                               >  1:826660/1‑140 (MQ=255)                              tCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCaa                                                                                                           >  1:92026/1‑140 (MQ=255)                              tCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCaa                                                                                                           <  1:956229/140‑1 (MQ=255)                              tCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCaa                                                                                                           >  2:17298/1‑140 (MQ=255)                               cAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCTTGAATGACCGTTCTGGTCAGGTGGATCAAg                                                                                                          <  2:826660/140‑1 (MQ=255)                                   tATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGCGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGCGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAg                                                                                                      >  2:1163461/1‑140 (MQ=255)                                       aTCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAg                                                                                                  >  2:439846/1‑140 (MQ=255)                                        tCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGa                                                                                                 >  2:6469/1‑140 (MQ=255)                                        tCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGa                                                                                                 <  2:1237537/140‑1 (MQ=255)                                        tCAGGATGTTAACGGCATCATGGTCGGTGTTGATACAAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGa                                                                                                 <  2:260106/140‑1 (MQ=255)                                          aGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACt                                                                                               >  2:373961/1‑140 (MQ=255)                                          aGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACt                                                                                               >  1:437836/1‑140 (MQ=255)                                          aGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACt                                                                                               >  1:412833/1‑140 (MQ=255)                                            gATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGc                                                                                             >  2:1088597/1‑140 (MQ=255)                                             aggagaaCGGAAACATGGCAGGGGTCGATCCCAAAATCGACGGTAACAAAGTTAAGTGGATAGATGGTGCGGCGGGAGGCTAAGATAAAGGTGAAATGAATGATCGTTCTGGTCAGGTGGATCACGACAGCCAGAATgac                                                                                            <  2:1063254/135‑3 (MQ=255)                                             aTGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGcc                                                                                            <  2:712352/140‑1 (MQ=255)                                             aTGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGcc                                                                                            >  2:364189/1‑140 (MQ=255)                                             aTGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGcc                                                                                            <  1:1163461/140‑1 (MQ=255)                                              tGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCt                                                                                           <  1:310020/140‑1 (MQ=255)                                              tGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCt                                                                                           <  2:1265901/140‑1 (MQ=255)                                               gTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTa                                                                                          >  2:556905/1‑140 (MQ=255)                                                ttAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTAc                                                                                         <  1:556905/140‑1 (MQ=255)                                                 tAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACa                                                                                        >  2:521501/1‑140 (MQ=255)                                                 tAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCACTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTAc                                                                                         >  1:262660/1‑139 (MQ=255)                                                 tAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCACTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTAc                                                                                         <  2:262660/139‑1 (MQ=255)                                                    cGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCt                                                                                     >  1:19662/1‑140 (MQ=255)                                                     ggCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTa                                                                                    <  1:17298/140‑1 (MQ=255)                                                     ggCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTa                                                                                    <  1:6469/140‑1 (MQ=255)                                                      gCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTAc                                                                                   >  1:913159/1‑140 (MQ=255)                                                      gCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTAc                                                                                   >  2:611577/1‑140 (MQ=255)                                                      gCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTAc                                                                                   >  1:168993/1‑140 (MQ=255)                                                      gCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTAc                                                                                   >  1:761486/1‑140 (MQ=255)                                                       catcatGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTAct                                                                                  >  1:21322/1‑140 (MQ=255)                                                          catGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACtctt                                                                               <  2:650115/140‑1 (MQ=255)                                                          catGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACtctt                                                                               >  1:265865/1‑140 (MQ=255)                                                          catGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACtctt                                                                               <  1:870457/140‑1 (MQ=255)                                                                cGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTc                                                                         <  2:19662/140‑1 (MQ=255)                                                                cGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTc                                                                         <  2:913159/140‑1 (MQ=255)                                                                      tGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTcg                                                                   <  2:265865/140‑1 (MQ=255)                                                                      tGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTcg                                                                   <  1:1200349/140‑1 (MQ=255)                                                                        aTACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTcgcg                                                                 >  1:764570/1‑140 (MQ=255)                                                                        aTACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTcgcg                                                                 >  1:237002/1‑140 (MQ=255)                                                                          aCCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGaa                                                               <  1:576067/140‑1 (MQ=255)                                                                           ccAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGaac                                                              <  2:764570/140‑1 (MQ=255)                                                                               aaTTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACg                                                          >  2:75516/1‑140 (MQ=255)                                                                                  tGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCt                                                       <  1:373961/140‑1 (MQ=255)                                                                                    aCGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCttt                                                     >  1:402965/1‑140 (MQ=255)                                                                                      ggTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTttgt                                                   <  2:237002/140‑1 (MQ=255)                                                                                       gTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTttgtt                                                  <  1:870066/140‑1 (MQ=255)                                                                                           caacGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATg                                              <  1:364189/140‑1 (MQ=255)                                                                                                cTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTttg                                                    <  1:329080/129‑1 (MQ=255)                                                                                                cTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTttg                                                    >  2:329080/1‑129 (MQ=255)                                                                                                cTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGc                                         <  1:75516/140‑1 (MQ=255)                                                                                                cTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGc                                         <  2:168993/140‑1 (MQ=255)                                                                                                   aGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTg                                      >  2:51046/1‑140 (MQ=255)                                                                                                     tGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAg                                    <  2:437836/140‑1 (MQ=255)                                                                                                      ggATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGc                                   >  1:70410/1‑140 (MQ=255)                                                                                                        aTCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCt                                  <  2:853955/139‑1 (MQ=255)                                                                                                        aTCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCt                                  >  1:853955/1‑139 (MQ=255)                                                                                                            tcgGTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTActct                             <  1:88721/140‑1 (MQ=255)                                                                                                               gTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCAc                          >  2:18497/1‑140 (MQ=255)                                                                                                               gTGCGGCTGCAGGCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCAc                          >  2:1155974/1‑140 (MQ=255)                                                                                                                           gCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGAc              <  2:21322/140‑1 (MQ=255)                                                                                                                           gCTTCGCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGAc              <  1:51046/140‑1 (MQ=255)                                                                                                                                gCTAAAGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTc         >  2:980903/1‑140 (MQ=255)                                                                                                                                   aaaGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGc      <  1:980903/140‑1 (MQ=255)                                                                                                                                    aaGGTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGCa     <  1:1088597/140‑1 (MQ=255)                                                                                                                                       gTGGCATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGCAAcc  <  2:402965/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                         TGGTAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGACATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGCAACC  >  NC_000913/393659‑393932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑