New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2526714 =	44 (0.770)	3 (0.060)	3/256	5.6	5.8%	coding (143/927 nt)	yfeR	putative LysR‑type DNA‑binding transcriptional regulator YfeR
	?	NC_000913	= 3144052	57 (1.080)					coding (113/1179 nt)	hybB	hydrogenase 2 membrane subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTCCGCTCAGTTGTTGCCCCATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAAT  >  NC_000913/2526576‑2526849                                                                                                                                           |                                                                                                                                        tttCCGCTCAGTTGTTGCCCCATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCg                                                                                                                                        <  2:545181/140‑1 (MQ=255) tttCCGCTCAGTTGTTGCCCCATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCg                                                                                                                                        <  2:837089/140‑1 (MQ=255)  ttCCGCTCAGTTGTTGCCCCATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGa                                                                                                                                       >  1:328458/1‑140 (MQ=255)   tCCGCTCAGTTGTTGCCCCATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGaa                                                                                                                                      <  1:783248/140‑1 (MQ=255)           gttgttGCCCCATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTa                                                                                                                              <  2:328458/140‑1 (MQ=255)                    ccATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTcc                                                                                                                     <  2:595347/140‑1 (MQ=255)                    ccATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTcc                                                                                                                     <  1:524846/140‑1 (MQ=255)                      aTACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCAGCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACTCCAGTATGATTTTCCAg                                                                                                                   <  2:561952/140‑1 (MQ=255)                      aTACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAg                                                                                                                   <  2:611418/140‑1 (MQ=255)                      aTACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAg                                                                                                                   <  2:722845/140‑1 (MQ=255)                         cGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTCCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTc                                                                                                                <  1:473568/140‑1 (MQ=255)                          gCCCGGTATCGCGCAACGTGCTATTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTcc                                                                                                               >  2:328724/1‑140 (MQ=255)                                tATCGCGCAACGTGCTGTTCAGTTCATTCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTcaca                                                                                                         <  1:914340/140‑1 (MQ=255)                                    gcgcAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAATCCCTTCACACtgt                                                                                                     <  2:866403/140‑1 (MQ=255)                                     cgcAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTca                                                                                                           <  1:655388/133‑1 (MQ=255)                                     cgcAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTca                                                                                                           <  2:839200/133‑1 (MQ=255)                                     cgcAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTca                                                                                                           >  1:839200/1‑133 (MQ=255)                                     cgcAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTca                                                                                                           >  2:655388/1‑133 (MQ=255)                                              cTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGc                                                                                           >  2:866045/1‑140 (MQ=255)                                               tGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGcc                                                                                          <  2:927733/140‑1 (MQ=255)                                                 ttcagttcaTCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGa                                                                                        <  1:866045/140‑1 (MQ=255)                                                      ttcaTCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGAc                                                                                                  <  2:752817/125‑1 (MQ=255)                                                      ttcaTCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGAc                                                                                                  >  1:752817/1‑125 (MQ=255)                                                      ttcaTCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGc                                                                                   >  2:213645/1‑140 (MQ=255)                                                      ttcaTCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGc                                                                                   >  2:323695/1‑140 (MQ=255)                                                         aTCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCa                                                                                >  2:523869/1‑140 (MQ=255)                                                           ccAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAgg                                                                              >  2:151471/1‑140 (MQ=255)                                                                agTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGAt                                                                         <  2:967386/140‑1 (MQ=255)                                                                            cGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGc                                                             <  1:284839/140‑1 (MQ=255)                                                                                aaGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGc                                                             >  2:205703/1‑136 (MQ=255)                                                                                aaGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGc                                                             <  1:205703/136‑1 (MQ=255)                                                                                                tGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCt                                         >  2:886824/1‑140 (MQ=255)                                                                                                       gTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTAc                                  >  1:607963/1‑140 (MQ=255)                                                                                                               cacTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGa                          >  2:932521/1‑140 (MQ=255)                                                                                                                 cTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGaaa                        >  1:903221/1‑140 (MQ=255)                                                                                                                    cACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAAcc                     >  1:94109/1‑140 (MQ=255)                                                                                                                      cgcgTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGaa                         <  2:765192/134‑1 (MQ=255)                                                                                                                      cgcgTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGaa                         >  1:765192/1‑134 (MQ=255)                                                                                                                         gTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATGCGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTaa                <  1:323695/140‑1 (MQ=255)                                                                                                                         gTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTaa                <  1:151471/140‑1 (MQ=255)                                                                                                                            gTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTg             >  2:165899/1‑140 (MQ=255)                                                                                                                                 gTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTa        <  1:523869/140‑1 (MQ=255)                                                                                                                                       cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGaat  >  1:9518/1‑140 (MQ=255)                                                                                                                                       cagGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGaat  >  1:461669/1‑140 (MQ=255)                                                                                                                                           |                                                                                                                                        TTTCCGCTCAGTTGTTGCCCCATACGCCCGGTATCGCGCAACGTGCTGTTCAGTTCATCCAGCAGTCGCTCAAGACGCAAAGCCAGCTGCTGCCCTGCATCTGTAAGCACCACTTCACGCGTGGTTCTGTCCAGCAGGCGAACACCAGTATGATTTTCCAGTTCCTTCACACTGTGACTCACTGCCGACTGGCTCAGGCCGATACGCTCTCCTGCACGACTAAAACTTTTCTCCTGCGCTACTGTGACGAAAACCTTTAATTGTTTTAAAGAAT  >  NC_000913/2526576‑2526849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.