| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,117,560 | G→C | A518G (GCC→GGC) | yghJ ← | putative lipoprotein YghJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,117,560 | 0 | G | C | 98.8% | 316.0 / ‑3.7 | 82 | A518G (GCC→GGC) | yghJ | putative lipoprotein YghJ |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (34/47); total (34/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.76e-01 | |||||||||||
CCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGTTGGTGGAGTC > NC_000913/3117426‑3117693 | ccATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGt > 1:1271971/1‑140 (MQ=255) cAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGttttt > 1:294827/1‑140 (MQ=255) tGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCg < 2:848443/140‑1 (MQ=255) cccTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGaa > 2:992421/1‑140 (MQ=255) cccTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGaa > 2:1551141/1‑140 (MQ=255) cccTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGaa > 2:1289166/1‑140 (MQ=255) cccTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGaa > 1:926132/1‑140 (MQ=255) cccTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGaa > 1:1276706/1‑140 (MQ=255) ccTCACCGACTTGCCCCAACGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAg > 1:170304/1‑140 (MQ=255) cTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGTGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAgg < 2:1023992/140‑1 (MQ=255) cTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAgg < 1:1051082/140‑1 (MQ=255) cccGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGgcca < 1:243834/139‑1 (MQ=255) aCCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGgcca < 2:1271971/140‑1 (MQ=255) aCCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGgcca < 1:127122/140‑1 (MQ=255) ccGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGgccag < 1:1325219/140‑1 (MQ=255) cTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCTGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGccagccag > 2:543557/1‑140 (MQ=255) cTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGccagccag < 1:729942/140‑1 (MQ=255) cTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGccagccag > 2:1316807/1‑140 (MQ=255) cTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGccagccag < 1:1576234/140‑1 (MQ=255) ttGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAgg < 1:1300453/131‑1 (MQ=255) ttGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAgg > 2:1300453/1‑131 (MQ=255) cccAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGtt > 2:207996/1‑140 (MQ=255) cAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGtttt < 1:1614600/140‑1 (MQ=255) aaTAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCAt < 2:1342573/140‑1 (MQ=255) aaCGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcg < 1:1289166/140‑1 (MQ=255) aaCGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcg < 1:1551141/140‑1 (MQ=255) cGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgcg < 2:1276706/140‑1 (MQ=255) cGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTAcgcg < 2:550706/140‑1 (MQ=255) aGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCGAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCAt < 2:540190/140‑1 (MQ=255) aGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCAt < 2:170304/140‑1 (MQ=255) aGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCAt < 2:439426/140‑1 (MQ=255) gTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCa < 1:1316807/140‑1 (MQ=255) gTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCa > 1:1416182/1‑140 (MQ=255) gCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGaa > 1:284213/1‑140 (MQ=255) gCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGaa > 2:569614/1‑140 (MQ=255) cGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAg > 1:367601/1‑140 (MQ=255) ggTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAgg < 1:695808/140‑1 (MQ=255) tATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGcc > 1:495367/1‑140 (MQ=255) aTCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGcct < 2:284213/140‑2 (MQ=255) cgcgcgTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCcgcg > 1:397474/1‑140 (MQ=255) gcgcgTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGAGAAGGCCGCGt > 2:1413748/1‑140 (MQ=255) cgTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTgg > 1:412664/1‑140 (MQ=255) cgTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTgg < 2:294827/140‑1 (MQ=255) tAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGgag < 1:612142/140‑1 (MQ=255) cGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGata > 1:791413/1‑140 (MQ=255) ttttCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATAtt > 1:666032/1‑140 (MQ=255) tctggCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTcac < 1:543557/137‑1 (MQ=255) tCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTcac < 1:1248688/140‑1 (MQ=255) cTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCg > 1:1075258/1‑140 (MQ=255) cTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCg > 1:53478/1‑140 (MQ=255) gagaAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACcg < 2:926132/140‑1 (MQ=255) gagaAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACcg < 1:1012589/140‑1 (MQ=255) gagaAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACcg < 1:1142052/140‑1 (MQ=255) agaAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACcgc < 2:1433415/140‑1 (MQ=255) gaAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCGCCGCCTGACcgcg < 2:843356/140‑1 (MQ=255) gaAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACcgcg < 2:1416182/140‑1 (MQ=255) gaAGGCGCTTCCATAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACcgcg < 1:267309/140‑1 (MQ=255) gTAATGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGt < 2:791413/140‑1 (MQ=255) aaTGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGtgc < 2:53478/140‑1 (MQ=255) aaTGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGtgc < 2:374452/140‑1 (MQ=255) aaTGTACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGtgc < 2:964033/140‑1 (MQ=255) aTGTACGCCAACTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGtgct > 2:1293488/1‑140 (MQ=255) tACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGcc > 1:137878/1‑140 (MQ=255) tACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGcc > 2:1581419/1‑140 (MQ=255) tACGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGAGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGcc < 1:1413748/140‑1 (MQ=255) aCGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCa < 1:569614/140‑1 (MQ=255) cGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGtgct < 2:487651/135‑1 (MQ=255) cGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGtgct > 1:487651/1‑135 (MQ=255) cGCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCAt > 2:1427480/1‑140 (MQ=255) gCCAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATa < 2:682567/140‑1 (MQ=255) cAGCTCGTTTTTATCCCAGCCGTGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGCCCGCGCGCATTACCCGTGCTGCCATAGa > 1:824206/1‑140 (MQ=255) cAGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGa > 1:1101719/1‑140 (MQ=255) aGCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCAACACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGaa < 1:207996/140‑1 (MQ=255) gCTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAg < 1:1427480/140‑1 (MQ=255) cTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGt > 2:1263415/1‑140 (MQ=255) cTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGt > 1:1512602/1‑140 (MQ=255) cTCGTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGt > 1:802445/1‑140 (MQ=255) gTTTTTATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGTtgg < 1:1263415/140‑1 (MQ=255) ttttATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGTtggtg < 2:495367/140‑1 (MQ=255) ttttATCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGTtggtg < 2:802445/140‑1 (MQ=255) tATCCCCGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTGACCACCGCCTGACCGCGCGCATTCCCCGTGCTGCCATAGAAGTTGGTGGAg < 1:1593329/140‑1 (MQ=255) tCCCAGCCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGTTGGTGGAGTc > 2:1334427/1‑140 (MQ=255) cAGCCGCGTTTTTCGCCGAAGGCCAACCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGTAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGTTGGTGGAGTc < 2:162595/137‑1 (MQ=255) | CCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACGCCAGCTCGTTTTTATCCCAGGCGCGTTTTTCGCCGAAGGCCAGCCAGTAGTTTTTATCATTACGCGCCATCAGAATCGGGAAGGCCGCGTTGGAGATATTCACCACCGCCTGACCGCGCGCATTACCCGTGCTGCCATAGAAGTTGGTGGAGTC > NC_000913/3117426‑3117693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |