| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2521055 = | 32 (0.790) | 11 (0.300) +CTCCATAATGGTGA |
3/248 | 3.8 | 31.2% | noncoding (5/76 nt) | valX | tRNA‑Val |
| ? | NC_000913 | 2729375 = | 22 (0.540) | noncoding (70/76 nt) | gltW | tRNA‑Glu | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TCCCAGCTGAGCTAATCACCCACTTCGGTACTTCACATTTTTACAAGAAATTTAGCTGGCGAGAAAGTGGTGGGTGATGACGGGATCGAACCGCCGACCCCCTCCTTGTAAGGGAGGTGCTCTCCCAGCTGAGCTAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2521193‑2521055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCC > NC_000913/2729375‑2729428 |||||||||||||| TCCCAGCTGAGCTAATCACCCACTTCGGTACTTCACATTTTTACAAGAAATTTAGCTGGCGAGAAAGTGGTGGGTGATGACGGGATCGAACCGCCGACCCCCTCCTTGTAAGGGAGGTGCTCTCCCAGCTGAGCTAATCC > 1:206744/1‑140 tacggtaTGGTGGAGGATGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTC > 2:2059380/8‑140 ggtaTGGTGGAGGATGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCtta < 2:1712054/136‑4 taTGGTGGAGGAAGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCttaac < 1:283214/138‑6 aTGGTGGAGGATGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCttaacc < 1:370281/139‑7 TGGTGGAGGATGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCttaaccc > 1:749662/1‑133 gagGATGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGagg < 2:1320154/121‑4 gagGATGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGG > 1:1320154/4‑124 TGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCtt > 1:599024/1‑123 TGACGGGATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCtt < 2:599024/125‑3 GATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCttaacc < 1:979543/123‑7 GATCGAACCGCCGACCCTCTGCTTGTAAGGCAGATGCTCTCCCAGCTGAGCTAATCCTCCATAATGGTGACCCGTAGGGGATTCGAACCCCTGTTACCTCCGTGAAAGGGAGGTGTCttaacc > 2:979543/1‑117 |||||||||||||| TCCCAGCTGAGCTAATCACCCACTTCGGTACTTCACATTTTTACAAGAAATTTAGCTGGCGAGAAAGTGGTGGGTGATGACGGGATCGAACCGCCGACCCCCTCCTTGTAAGGGAGGTGCTCTCCCAGCTGAGCTAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2521193‑2521055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCC > NC_000913/2729375‑2729428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |