New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 781143	52 (1.280)	11 (0.300) +TAAACACTTTTTAAC	7/246	2.4	28.2%	noncoding (76/76 nt)	valZ	tRNA‑Val
	?	NC_000913	2947605 =	11 (0.270)					intergenic (+32/‑2)	metW/metV	tRNA‑Met/tRNA‑Met

ACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTA‑AAAGC‑AGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGC  >  NC_000913/2947496‑2947737                                                                                                                |                                                                                                                                     aCGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTA‑AAAGC‑AGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCtcgtc                                                                                                        >  1:2265964/1‑140 (MQ=255)    cgGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTA‑AAAGC‑AGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCggg                                                                                                     >  1:1666741/1‑140 (MQ=255)       ggTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAATTTGATGCAGAA‑AAAGC‑AGTACTGTGACGCGGTGACGAGCCGCCCGGTAGCCCGTCGGGCTc                                                                                                  >  2:1594676/1‑140 (MQ=11)         tGGAGCAGCCTGGTAGCGCGTCCGGCTCATAACCCGAAGGGCGTCGGTTCAACTGCGGCAGCCGCGTACAAGCAACATGG‑‑GGAGTATAAAGCGCGTCCGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCAt                                                                                                <  2:1594649/140‑1 (MQ=0)           gAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAATTTGACGCAATA‑GAAGC‑AGTACTTATACGCGGGGGGGAGTAGCCTGGAAGCTCGTCGGGCTCATaa                                                                                              >  2:2275757/1‑140 (MQ=11)                       aggattagctcagctgggagagcatctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCAt                                                                                                <  2:799533‑M2/39‑1 (MQ=255)                       aggattagctcagctgggagagcatctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCAt                                                                                                >  1:799533‑M2/90‑128 (MQ=255)                          attagctcagctgggagagcatctgccttacaagcagagggtcggcggttcgatcccgtaatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAaggccgca                                                                                 >  2:673237‑M2/87‑138 (MQ=255)                           cgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAACTTGACCAAGGA‑AAAGG‑ATTACGGTGACCCGGGGTGGCGCAGCCAAGTAGCTCGTCGGGCTCATAACCCAAAGGCCGCCggc                                                                              >  2:2025009/1‑139 (MQ=14)                            tagctcagctgggagagcatctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAacccgaaggccgcagg                                                                               <  2:142339‑M2/56‑8 (MQ=255)                             agctcagctgggagagcatctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCcgaaggccgcaggt                                                                              >  2:805497‑M2/84‑135 (MQ=255)                                   gctgggagagcatctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTcaaaa                                                                        >  1:738575‑M2/78‑139 (MQ=255)                                    ctgggagagcatctgccttacaagcagagggtcggcggttcgatcccctcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGGAGCTCGTCCGGCTCATAACCCGAAGGCCGCAGGTTCAAATc                                                                       >  2:1194465‑M2/77‑140 (MQ=255)                                      tAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTA‑AAGGC‑AGTACGGTGACGCGGGGTGGCGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGc                                                                   >  1:1682307/1‑140 (MQ=255)                                       ggagagcatctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAatcctg                                                                    >  1:879399‑M2/74‑138 (MQ=255)                                               tctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCTAAGGCCGCAGGTTCAAATCCTGCCCCCGCa                                                            <  2:161490‑M2/75‑1 (MQ=255)                                               tctgccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCa                                                            >  2:157002‑M2/66‑140 (MQ=255)                                                  gccttacaagcagagggtcggcggttcgatcccgtcatcctccaccataaacactttttaacGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCAAcc                                                         >  1:1189704‑M2/63‑140 (MQ=255)                                                          cAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTA‑AAAGC‑AGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGaa                                               <  1:1594676/140‑1 (MQ=255)                                                           aaaTCCGGCCCCCGCAACCAATCAAATTTGATGAAGTA‑AAAGC‑AGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAac                                              <  1:2275757/140‑1 (MQ=255)                                                              tCCGGCCCCCGCAACCAATCAAATTTGATGAAGAA‑AAGGC‑AGTACGGGGACCCGGGGTGGAACAGCCAGGCGCCTCGCCGGGCCCTTAACCCAAAGGCCTCCGGCTCAAATCCGCCCCCCCCAACCAATTCTTGAACAcc                                           >  2:2075533/1‑140 (MQ=9)                                                                                                         gTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAgc  >  2:2292239/1‑140 (MQ=255)                                                                                                                |                                                                                                                                     ACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTA‑AAAGC‑AGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTGTTTCTGGTCTCCCATAAAAAAGC  >  NC_000913/2947496‑2947737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.