Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,039,3750AG68.5% 131.4 / 162.8 203noncoding (1857/2905 nt)rrlA23S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base A (28/36);  new base G (57/82);  total (85/118)
Fisher's exact test for biased strand distribution p-value = 7.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 212 total aligned reads displayed.

CTCGTGGAGCTGAAATCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCGTAATGATGGCCAGGCTGTCT  >  NC_000913/4039249‑4039514
                                                                                                                              |                                                                                                                                           
      gAGCTGAAATCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCg                                                                                                                          <  2:1880253/140‑1 (MQ=37)
           gAAATCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGct                                                                                                                     >  2:2045265/1‑140 (MQ=40)
            aaaTCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGctc                                                                                                                    >  2:2129266/1‑140 (MQ=40)
                 aGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGAt                                                                                                               >  1:1757173/1‑140 (MQ=40)
                      aaGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAg                                                                                                          <  1:2028308/140‑1 (MQ=40)
                                 tggctgCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAAc                                                                                               >  1:1608026/1‑140 (MQ=40)
                                  ggctgCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAAcg                                                                                              >  1:2122444/1‑140 (MQ=40)
                                   gctgCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAAcgg                                                                                             <  1:2168393/140‑1 (MQ=40)
                                   gctgCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAAcgg                                                                                             >  2:1892846/1‑140 (MQ=40)
                                       cAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCGGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACggcggc                                                                                         <  2:2091811/140‑1 (MQ=255)
                                        aaCTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGcc                                                                                        <  2:2117354/140‑1 (MQ=40)
                                         aCTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCg                                                                                       <  1:1782131/140‑1 (MQ=40)
                                          cTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGt                                                                                      <  1:2157575/140‑1 (MQ=40)
                                               tattaAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAGACGGCGGCCGTAACta                                                                                 >  2:2118960/1‑140 (MQ=255)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAATGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:1335431/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  1:2305340/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:1175784/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  1:547011/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  1:191132/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              >  1:795587/2‑140 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:1040144/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:86787/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:2161343/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:259396/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:315558/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:355725/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:904434/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:757403/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:572873/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  1:1226583/139‑1 (MQ=2)
                                                  caaaaaCACAGGTCTGTGCGAAGCAGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  1:1505958/139‑1 (MQ=2)
                                                   aaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAAc                                                                             <  2:1207132/140‑1 (MQ=2)
                                                   aaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAAc                                                                             <  2:771877/140‑1 (MQ=2)
                                                   aaaaaCACAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAAc                                                                             <  1:650288/140‑1 (MQ=2)
                                                       acacAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGTGCTGACGCCTGCCCGGTGCTGTAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTc                                                                         >  1:608003/1‑140 (MQ=2)
                                                       acacAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  2:1504707/135‑1 (MQ=2)
                                                       acacAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              >  1:38182/1‑135 (MQ=2)
                                                       acacAGGTCTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGATGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATaa                                                                              <  1:1462468/135‑1 (MQ=2)
                                                         acaggtcTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCt                                                                       <  2:186080/134‑1 (MQ=2)
                                                          caggtcTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTa                                                                      <  1:884774/135‑1 (MQ=2)
                                                            ggtcTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAAc                                                                                   <  2:1216667/122‑1 (MQ=2)
                                                            ggtcTGTGCGAAGCCGTAAGGCGAAGTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAAc                                                                             <  2:710225/128‑1 (MQ=2)
                                                               cTGTGCAAACACGAAAGTGGTCGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGGAAACGGCGGCCGTAACTATAACGGTCCTAAGGTa                                                                 >  1:1584780/1‑140 (MQ=255)
                                                                  tgCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCg                                                              >  1:1840953/1‑140 (MQ=40)
                                                                  tgCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGCTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGACCTAAGGTAGCg                                                              >  1:2270141/1‑140 (MQ=255)
                                                                   gCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGa                                                             >  2:1942991/1‑140 (MQ=40)
                                                                       acacGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAAtt                                                         >  1:1721025/1‑140 (MQ=40)
                                                                          cGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCt                                                      <  1:1625957/140‑1 (MQ=40)
                                                                            aaaGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTg                                                    >  1:2012409/1‑140 (MQ=40)
                                                                             aaGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGt                                                   <  2:1811591/140‑1 (MQ=40)
                                                                             aaGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGt                                                   <  1:2206500/140‑1 (MQ=40)
                                                                              aggcgaagTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTc                                                  >  1:1051078/8‑140 (MQ=2)
                                                                              aggcgaagTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTc                                                  >  1:1194955/8‑140 (MQ=2)
                                                                                  gaagTATACGGGCTGACGCCTGCCTGGTGCTGGAAGGTTAAGGGGAGCGGTTAGTGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGt                                              <  1:1364813/137‑1 (MQ=2)
                                                                                  gaagTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGt                                              <  2:2190997/137‑1 (MQ=2)
                                                                                  gaagTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGt                                              <  1:986803/137‑1 (MQ=2)
                                                                                  gaagTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTACTTGTCAGGt                                              <  2:1519101/137‑1 (MQ=2)
                                                                                   aagTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGt                                              <  2:1113304/137‑1 (MQ=2)
                                                                                   aagTATACGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTa                                             >  2:1450625/3‑140 (MQ=2)
                                                                                       ataCGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGtt                                         >  2:1925484/1‑140 (MQ=40)
                                                                                         acgggctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGt                                              <  2:411720/127‑1 (MQ=2)
                                                                                         acgggctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTct                                       >  2:1048485/7‑139 (MQ=2)
                                                                                          cgggctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCACAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTctg                                      >  1:492784/6‑138 (MQ=2)
                                                                                          cGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCg                                      <  2:1799575/140‑1 (MQ=40)
                                                                                           gggctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGa                                     <  2:644731/136‑1 (MQ=2)
                                                                                             gctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGAcc                                   >  2:128990/3‑140 (MQ=2)
                                                                                             gctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGAcc                                   >  1:1407004/3‑140 (MQ=2)
                                                                                             gctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGAcc                                   <  1:337601/138‑1 (MQ=2)
                                                                                              ctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTctga                                     <  2:1123798/136‑4 (MQ=2)
                                                                                              ctgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGa                                     >  1:1123798/2‑137 (MQ=2)
                                                                                               tgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGAcccg                                 <  2:1091069/140‑3 (MQ=2)
                                                                                               tgACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGAcccg                                 <  2:1801021/140‑3 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTTAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  2:1087763/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGAcc                                   >  1:1006883/1‑137 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGAcc                                   <  2:1006883/137‑1 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  1:1335936/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  2:1067762/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  2:1274062/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  2:737343/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  1:123924/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  2:494232/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  1:358576/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  1:894635/1‑140 (MQ=2)
                                                                                                gACGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGc                                >  1:1483088/1‑140 (MQ=2)
                                                                                                 aCGCCTGCCCGGTGCCGGAAGTCTAATTGATGGGGTTAGCCGCAAGGCGAAGCCCTTGATCGAAGCCCCGGTAAGCGGCGGCCGTAACTATAACGATCCTTAGGTAGCGAAATTCCTTGTCGGTATAGTTCCGatccgct                               >  2:2310370/1‑134 (MQ=14)
                                                                                                 aCGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCa                               >  1:1793538/1‑140 (MQ=40)
                                                                                                  cGCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGCAc                              <  1:1246400/140‑1 (MQ=2)
                                                                                                   gCCTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGTCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGCACg                             <  2:1999310/140‑1 (MQ=2)
                                                                                                    ccTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGCACGa                            <  2:1630136/140‑1 (MQ=2)
                                                                                                     cTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGCACGaa                           >  1:862917/1‑140 (MQ=2)
                                                                                                     cTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGCACGaa                           <  2:810663/140‑1 (MQ=2)
                                                                                                     cTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGCACGaa                           <  1:1092688/140‑1 (MQ=2)
                                                                                                     cTGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTATGACCCGCACGaa                           <  2:824440/140‑1 (MQ=2)
                                                                                                     cTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGaa                           <  2:2267229/140‑1 (MQ=40)
                                                                                                      tGCCCGGTGCTGGAAGGTTAAGGGGAGCGGTTAGGGGTAACCCGAAGCTGTGAACCGAAGCCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCAGGTAAATTCTGACCCGCACGAAt                          <  2:1742508/140‑1 (MQ=2)
                                                                                                          cGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCg                      <  1:1845371/140‑1 (MQ=40)
                                                                                                          cGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCg                      <  1:1925484/140‑1 (MQ=40)
                                                                                                                        tAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCGTAATGATGGCCAgg        <  1:1892846/140‑1 (MQ=40)
                                                                                                                              aTGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCGTAATGATGGCCAGGCTGtct  <  2:1608026/140‑1 (MQ=40)
                                                                                                                              aTGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCGTAATGATGGCCAGGCTGtct  <  1:1947330/140‑1 (MQ=40)
                                                                                                                              |                                                                                                                                           
CTCGTGGAGCTGAAATCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATGGGGTTAGCCGCAAGGCGAAGCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGCGTAATGATGGCCAGGCTGTCT  >  NC_000913/4039249‑4039514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑