| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,622,811 | A→G | intergenic (+70/+6) | mgtS → / ← mgrR | small protein MgtS/small regulatory RNA MgrR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,622,811 | 0 | A | G | 100.0% | 28.5 / NA | 9 | intergenic (+70/+6) | mgtS/mgrR | small protein MgtS/small regulatory RNA MgrR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/0); total (9/0) | |||||||||||
TACTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTGTGTTTTGCTTTTACGCTAACAGGCATTTTCCTGCACTGATAACGAATCGTTGACACAGTAGCATCAGTTTTC > NC_000913/1622677‑1622938 | tACTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGGAGGCg > 2:1601971/1‑140 (MQ=255) tattttCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGGCGGCGAAAAAAAACCGCCAg > 1:2072793/1‑140 (MQ=255) aCTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGGCGGCGAAAAAAAACCGCCAGTAAACCGGCGGGGAAAGGTTTGCTGGGTAGATTTTTGGTTTTCtt > 2:2113033/1‑140 (MQ=255) ccccTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGGCGGCGAAAAAAAACCGCCCGTAAACCGGCGGGGGATGGTTTCATGGGTAGATTTGTGTTTTTCTTTTTCGCTAACAGGCCTTTTTCTGCACCGATAACg > 2:1955580/1‑140 (MQ=255) gTTACGGTGGTGTACGGGGGGTTTGTTTTTTGGGGCGGAAAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTGTGTTTTGCTTTTACGCTAACAGGCATTTTCCTGCACTGATAACGAATCGt < 2:2271703/140‑1 (MQ=255) tgtgTACAAGGGGCCTGATTTTTATGGCGGCGAAAAAAAAACGCCAGTAAACCGGCGGGGAAAGGTTGCATGGGTAGGTTTGTGTTTTGCTTTTTAGCTAAAAGGGATTTTTCTGCACCGATAACGAAACGTTTGCACAg > 2:1873967/1‑140 (MQ=255) gaggCCTGATTTTTATGGCGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAAAGCTTGGATGGAAAGAATTGTGTTTTTCTTTTACGCTAACAGGCATTTTCCTTCACTGGTAACGAAACGTTGGAACAGGAGCATCAg > 2:2103236/3‑140 (MQ=255) ggCCTGATTTTTATGGCGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAAAGCTTGCATGGGTAGAATTTTGTTTTTCTTTTTCGCCAACAGGCATTTTTCCGCACCGATAACGAAACGTTTACACAGGAGGATCAggt > 2:1820481/1‑138 (MQ=255) ggCCTGATTTTTATGGCGGCGAAAAAAAACCGCCAGTAAACCGGCGGGGAAAGGTTTCATGGGTAGATTTTTGTTTTTCTTTTTCGCTAACAAGCATTTTTCTGCACTGATAACGAATCGTTGACACAGTAGCATCAGtt > 2:1752333/1‑140 (MQ=255) tttttttttAGGGCGGAAAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTGTGTTTTGCTTTTACGCTAACAGGCATTTTCCTGCACTGATAACGAATCGTTGACACAGTAGCATCAGTTTtc < 2:2072793/136‑1 (MQ=255) cTGATTTTTATGGCGGCGAAAAAAAACCGCCAGTAAACCGGCGGGGAATGCTTGCATGGATAGATTTTTGTTTTTCTTTTTCGCCAACAGGCAATTTTCTGAACTGATAAAGAAACGTTTACACAGTAGCATCAGgtttt > 2:1575498/1‑139 (MQ=255) | TACTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAATGAACGGAGATAATCCCTCACCTAACCGGCCCCTTGTTACAGTTGTGTACAAGGGGCCTGATTTTTATGACGGCGAAAAAAAACCGCCAGTAAACCGGCGGTGAATGCTTGCATGGATAGATTTGTGTTTTGCTTTTACGCTAACAGGCATTTTCCTGCACTGATAACGAATCGTTGACACAGTAGCATCAGTTTTC > NC_000913/1622677‑1622938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |