Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,619,382	C→T	P88L (CCG→CTG)	marR →	DNA‑binding transcriptional repressor MarR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,619,382	0	C	T	100.0%	337.1 / NA	95	P88L (CCG→CTG)	marR	DNA‑binding transcriptional repressor MarR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (50/45);  total (50/45)

TAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCA  >  NC_000913/1619248‑1619518                                                                                                                                       |                                                                                                                                         tAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAAcc                                                                                                                                     <  2:381032/140‑1 (MQ=255)        ctctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGa                                                                                                                              >  2:686373/1‑140 (MQ=255)        ctctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGa                                                                                                                              >  1:1398958/1‑140 (MQ=255)         tctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGAc                                                                                                                             >  1:877526/1‑140 (MQ=255)         tctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGAc                                                                                                                             >  2:1074382/1‑140 (MQ=255)         tctgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGAc                                                                                                                             >  2:866222/1‑140 (MQ=255)           tgctctATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACaa                                                                                                                           <  1:1108082/140‑1 (MQ=255)                tATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGcgcg                                                                                                                      <  1:282582/140‑1 (MQ=255)                  tCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTTGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCgcggc                                                                                                                    >  2:288239/1‑140 (MQ=255)                  tCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCgcggc                                                                                                                    >  1:872427/1‑140 (MQ=255)                    cGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGt                                                                                                                  <  1:866222/140‑1 (MQ=255)                    cGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGt                                                                                                                  <  2:1166300/140‑1 (MQ=255)                    cGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGt                                                                                                                  <  1:1241730/140‑1 (MQ=255)                    cGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGt                                                                                                                  <  1:540546/140‑1 (MQ=255)                     gCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTa                                                                                                                 >  1:750846/1‑140 (MQ=255)                       tGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACt                                                                                                               >  1:243956/1‑140 (MQ=255)                        gcgcGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTg                                                                                                              >  2:641533/1‑140 (MQ=255)                         cgcgGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTgg                                                                                                             <  2:243956/140‑1 (MQ=255)                         cgcgGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTgg                                                                                                             <  1:459447/140‑1 (MQ=255)                            ggcgTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTaa                                                                                                          >  1:626624/1‑140 (MQ=255)                               gtgtATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAAc                                                                                                       <  1:609576/140‑1 (MQ=255)                                          cGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggc                                                                                            >  1:913886/1‑140 (MQ=255)                                            gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                          >  2:1039387/1‑140 (MQ=255)                                            gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                          >  2:725606/1‑140 (MQ=255)                                            gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                          >  1:313370/1‑140 (MQ=255)                                            gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                          <  2:872427/140‑1 (MQ=255)                                            gTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACcggcgg                                                                                          >  2:1399543/1‑140 (MQ=255)                                             ttGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCggcggc                                                                                         <  2:1480126/140‑1 (MQ=255)                                              tGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcgtcg                                                                                        <  1:1074382/140‑1 (MQ=255)                                              tGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcg                                                                                        <  2:877526/140‑1 (MQ=255)                                               gAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcgc                                                                                       <  1:1346174/140‑1 (MQ=255)                                                  cTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc                                                                                    <  2:626624/140‑1 (MQ=255)                                                  cTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc                                                                                    <  2:1587954/140‑1 (MQ=255)                                                  cTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc                                                                                    <  1:531989/140‑1 (MQ=255)                                                  cTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc                                                                                    <  2:435516/140‑1 (MQ=255)                                                     aaaaaGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAat                                                                                 <  2:913886/140‑1 (MQ=255)                                                       aaaGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAatat                                                                               <  2:1011916/140‑1 (MQ=255)                                                             aTTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGa                                                                           <  1:1109432/138‑1 (MQ=255)                                                             aTTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGa                                                                           >  2:1109432/1‑138 (MQ=255)                                                              ttGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACa                                                                        <  2:1398958/140‑1 (MQ=255)                                                              ttGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACa                                                                        <  1:1399543/140‑1 (MQ=255)                                                               tGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACaa                                                                       >  1:827911/1‑140 (MQ=255)                                                               tGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACaa                                                                       >  1:1494679/1‑140 (MQ=255)                                                               tGTCGGTCGACCTAGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCCGCAATATGTGAACaa                                                                       >  1:1339329/1‑140 (MQ=255)                                                                gtcggtcgACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAAt                                                                      <  1:1091619/140‑1 (MQ=255)                                                                  cggtcgACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGc                                                                    <  2:750846/140‑1 (MQ=255)                                                                     tcgACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCAt                                                                 >  2:843349/1‑140 (MQ=255)                                                                             ggAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCCGCAATATGTGAACAATGCCATCAATTAGt                                                         <  2:1339329/140‑1 (MQ=255)                                                                              gAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGtt                                                        <  2:930090/140‑1 (MQ=255)                                                                                   cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGcc                                                                   <  1:1143853/124‑1 (MQ=255)                                                                                   cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGcc                                                                   >  2:1143853/1‑124 (MQ=255)                                                                                   cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGcc                                                    >  1:1098805/1‑139 (MQ=255)                                                                                   cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGcc                                                    <  2:1098805/139‑1 (MQ=255)                                                                                   cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCa                                                   >  1:8501/1‑140 (MQ=255)                                                                                   cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCa                                                   >  1:248202/1‑140 (MQ=255)                                                                                   cTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCa                                                   >  2:33982/1‑140 (MQ=255)                                                                                    tGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAg                                                  <  2:827911/140‑1 (MQ=255)                                                                                      aCCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTggtc                                                    <  2:806766/136‑3 (MQ=255)                                                                                      aCCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTggtc                                                    >  1:806766/1‑134 (MQ=255)                                                                                      aCCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGa                                                >  1:91762/1‑140 (MQ=255)                                                                                      aCCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGa                                                >  1:72121/1‑140 (MQ=255)                                                                                       cccGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGAc                                               >  1:272075/1‑140 (MQ=255)                                                                                        ccGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGAcc                                              >  2:638750/1‑140 (MQ=255)                                                                                        ccGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGAcc                                              >  2:527412/1‑140 (MQ=255)                                                                                         cGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCt                                             <  2:1141432/140‑1 (MQ=255)                                                                                          gTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTg                                            <  1:33982/140‑1 (MQ=255)                                                                                           tATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGc                                           >  1:1084017/1‑140 (MQ=255)                                                                                             tGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCAc                                         <  2:272075/140‑1 (MQ=255)                                                                                                tGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCaa                                      >  2:866589/1‑140 (MQ=255)                                                                                                tGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCaa                                      >  1:14423/1‑140 (MQ=255)                                                                                                    tCGCCTGGTCTGTAAAGGCTGGGTGTAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAAt                                  <  1:68475/140‑1 (MQ=255)                                                                                                    tCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAAt                                  <  1:288239/140‑1 (MQ=255)                                                                                                       ccTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGTCAGGACCTGCACCAAGAATTaa                               >  1:1112114/1‑140 (MQ=255)                                                                                                       ccTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTaa                               >  1:531969/1‑140 (MQ=255)                                                                                                       ccTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTaa                               >  2:1298183/1‑140 (MQ=255)                                                                                                          ggTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACaa                            >  2:640331/1‑140 (MQ=255)                                                                                                           gTCTGTAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACaaa                           <  2:50005/140‑1 (MQ=255)                                                                                                                tAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGTGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAAcc                      >  1:1337623/1‑140 (MQ=255)                                                                                                                tAAAGGCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAAcc                      >  1:511744/1‑140 (MQ=255)                                                                                                                     gCTGGGTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGAcg                 >  2:1390776/1‑140 (MQ=255)                                                                                                                        gggTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGAcggcg              >  2:570222/1‑140 (MQ=255)                                                                                                                          gTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa            >  2:1067747/1‑140 (MQ=255)                                                                                                                          gTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa            >  2:641552/1‑140 (MQ=255)                                                                                                                          gTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa            >  1:1515549/1‑140 (MQ=255)                                                                                                                          gTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa            >  1:168895/1‑140 (MQ=255)                                                                                                                          gTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa            <  1:570222/140‑1 (MQ=255)                                                                                                                          gTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa            >  1:1088677/1‑140 (MQ=255)                                                                                                                          gTGGAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGa            >  2:84498/1‑140 (MQ=255)                                                                                                                             gAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGa         <  1:638750/140‑1 (MQ=255)                                                                                                                             gAAAGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGa         <  1:843349/140‑1 (MQ=255)                                                                                                                               aaGGTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAg       >  1:1622773/1‑140 (MQ=255)                                                                                                                                  gTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTgg    <  2:14423/140‑1 (MQ=255)                                                                                                                                  gTTGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTgg    <  1:1390776/140‑1 (MQ=255)                                                                                                                                   ttGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGc   <  2:1622773/140‑1 (MQ=255)                                                                                                                                    tGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGTCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCa  <  2:1112114/140‑1 (MQ=255)                                                                                                                                    tGCTGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAAGGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCa  <  1:779330/140‑1 (MQ=255)                                                                                                                                       |                                                                                                                                         TAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCA  >  NC_000913/1619248‑1619518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑