Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,628,649	0	A	C	25.0%	109.7 / 12.3	56	intergenic (+102/+206)	nadR/ettA	DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR/energy‑dependent translational throttle protein EttA
Reads supporting (aligned to +/- strand):  ref base A (34/8);  new base C (0/14);  total (34/22)
Fisher's exact test for biased strand distribution p-value = 5.51e-08
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA  >  NC_000913/4628510‑4628788                                                                                                                                             |                                                                                                                                            tGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGaaaaaa                                                                                                                                             >  1:260979/1‑140 (MQ=255) tGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGaaaaaa                                                                                                                                             >  2:1433895/1‑140 (MQ=255)      cTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGc                                                                                                                                        <  2:1293798/140‑1 (MQ=255)      cTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGc                                                                                                                                        <  2:388136/140‑1 (MQ=255)      cTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGc                                                                                                                                        <  2:260979/140‑1 (MQ=255)          tGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACgg                                                                                                                                    >  1:623198/1‑140 (MQ=255)            cGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGt                                                                                                                                  <  1:1076756/140‑1 (MQ=255)                agaTGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGAcc                                                                                                                              <  2:832473/140‑1 (MQ=255)                   tgatgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGc                                                                                                                           >  2:13675/1‑140 (MQ=255)                     aggggggAGAAAAAATAACCGTGATGAAACTGCTCAAAGGGGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTATCGAGATTAAACAAGGTTTGAAAAACCCTGCACGGGTGACCCGCCa                                                                                                                         <  2:225224/138‑1 (MQ=255)                         gggAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGaa                                                                                                                     >  2:454317/1‑140 (MQ=255)                             gCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTg                                                                                                                 >  1:629159/1‑140 (MQ=255)                              cAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACATCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGCGACCCGCCACGAAATTGa                                                                                                                >  1:389860/1‑140 (MQ=255)                               agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAg                                                                                                               <  1:13675/140‑1 (MQ=255)                               agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTATCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAg                                                                                                               >  1:225224/1‑140 (MQ=255)                                     aaCCGTGATAAAACTGCTCAAAGGCGAGGTATAAAA‑TGATTTTTTTTAATGATTTAAAACCCTCTCGGGAAGGGGCTGTCGAGATAAAACAAGTTTTAAAAAACCCTGCCCGGGTGACCCGCCACGAAATTGAGGATGCt                                                                                                         <  2:623198/140‑1 (MQ=255)                                         gTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAAATTAAACAAGGTTTAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAgg                                                                                                     <  2:165363/140‑1 (MQ=255)                                         gTGATGAAACTGCTAAAAGGCGAGGTATAAAA‑TGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAAAAAGTTTTGAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAgg                                                                                                     <  2:1368660/140‑1 (MQ=255)                                         gTGATAAACCTGCTAAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGTTTTAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAgg                                                                                                     <  2:926353/140‑1 (MQ=255)                                           gatgaAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAACCCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGa                                                                                                             <  1:920390/130‑1 (MQ=255)                                           gatgaAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGa                                                                                                             >  2:920390/1‑130 (MQ=255)                                           gatgaAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt                                                                                                   >  1:1368660/1‑140 (MQ=255)                                           gatgaAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt                                                                                                   >  1:335127/1‑140 (MQ=255)                                           gatgaAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt                                                                                                   >  2:1160777/1‑140 (MQ=255)                                           gatgaAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt                                                                                                   >  1:842167/1‑140 (MQ=255)                                             tgaAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtgt                                                                                                 >  1:893885/1‑140 (MQ=255)                                                  cTGTTCAAAGGCG‑GTGATAAAACTGATTTTTTGTGATGGTTTAAACGCCTCTGCGGAGGTGGCTGGGGAGATTAACCAGGTTGTAAAAAACCCGGCACGGGGGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAg                                                                                            <  2:1210306/140‑1 (MQ=255)                                                  cTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAg                                                                                            >  2:1234014/1‑140 (MQ=255)                                                     cTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtgttg                                                                                               <  1:394597/134‑1 (MQ=255)                                                     cTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtgttg                                                                                               >  2:394597/1‑134 (MQ=255)                                                     cTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc                                                                                         >  1:1399462/1‑140 (MQ=255)                                                     cTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc                                                                                         >  1:165363/1‑140 (MQ=255)                                                     ataacaGGCGAAGTATAGAA‑TGCGTTTTTTTGATGAGTTGAAAACCTCTCTGGCAGAGACTGTCGCGCTTAAACAAGGTTTGAAAAAACCTGCACGGGCGACCCGCCACGAAATTCAGGATTCTAAGGCTGTTGAAGAcc                                                                                         >  2:1255937/6‑140 (MQ=255)                                                      tCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCg                                                                                        >  1:860728/1‑140 (MQ=255)                                                      tCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCg                                                                                        >  1:841113/1‑140 (MQ=255)                                                            gCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACg                                                                                  <  1:454317/140‑1 (MQ=255)                                                            gCGAGGTAAAAAA‑TGAGTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGGGGCTGTCGAGATTAAACAAGGTTTAAAAAACCCTGCCCGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACg                                                                                  <  2:335127/140‑1 (MQ=255)                                                             cGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACgg                                                                                 >  1:64163/1‑140 (MQ=255)                                                                        a‑TGATTTTTTTTGATGAGTTAAAACCCTCTCTGGAAGGGGCTGTGGAGATAAAAAAAGGTTTAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAcgccg                                                                      <  2:842167/140‑1 (MQ=255)                                                                          tGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCAcgccgc                                                                     >  1:727754/1‑140 (MQ=255)                                                                           gAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCa                                                                    >  1:829906/1‑140 (MQ=255)                                                                            attttttttGATGAGTTGAAACCCTCTCGGGAAGAGGCTGTCGAAATAAAACAAGGTTTAAAAAACCCTGCCGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt                                                                   <  2:629159/138‑1 (MQ=255)                                                                            aGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt                                                                   >  1:984651/1‑140 (MQ=255)                                                                             gTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATc                                                                  >  2:535252/1‑140 (MQ=255)                                                                                    aaacaggTTAAAACCCTCTCGGAAAGAGGCTGGCGAGATAAAAAAAGGTTTAAAAAACCCTGCGGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt                                                           <  2:412684/134‑1 (MQ=255)                                                                                         aGTTAAAACCCTCTCGGAAAGAGGCTGTCGAGATAAAACAAGGTTTAAAAAACCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTg                                                      <  2:841113/140‑1 (MQ=255)                                                                                            taaaacCCTCTCTGGAAGGGGCTGTCGAGATAAAACAAGTTTAAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTc                                                   <  2:1593830/138‑1 (MQ=255)                                                                                                     ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAAtctgtct                                          >  1:412684/1‑134 (MQ=255)                                                                                                     ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa                                          >  1:1088857/1‑140 (MQ=255)                                                                                                       ggggaggaGGCTGTGGAGATAAAACAGGTTTTAAAAAACCCTGCAGGGGGGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATg                                        <  2:1226145/138‑1 (MQ=37)                                                                                                               ggCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCtt                                >  1:836683/1‑140 (MQ=255)                                                                                                                gCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa                               >  2:831832/1‑140 (MQ=255)                                                                                                                gCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa                               >  1:1226145/1‑140 (MQ=255)                                                                                                                gCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa                               >  1:1522629/1‑140 (MQ=255)                                                                                                                 ttGTCGAGATAAAACAAGGTTTAAAAAACCCTGCGGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc                              <  1:520162/139‑1 (MQ=38)                                                                                                                 cTGTGGAGATAAAACAAGTTTAAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc                              <  2:860728/140‑1 (MQ=38)                                                                                                                  tGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAcc                             >  1:862601/1‑140 (MQ=255)                                                                                                                      gagaTAAAAAAAGTTTAAAAAAACCCGGCGGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt                         <  2:727754/140‑1 (MQ=37)                                                                                                                           aaaaCAGGGTTAAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt                    <  2:20875/139‑1 (MQ=37)                                                                                                                            aaaCAAGTTTTAAAAAACCCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATc                   <  1:1033889/140‑1 (MQ=255)                                                                                                                              aCAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAg                 >  2:1080062/1‑140 (MQ=255)                                                                                                                                  ggTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt             >  1:62591/1‑140 (MQ=255)                                                                                                                                   ttttAAAAAACCCTGCCGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa            <  2:829906/139‑1 (MQ=255)                                                                                                                                   gTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa            >  2:71865/1‑140 (MQ=255)                                                                                                                                   gTTTAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa            <  1:1160777/140‑1 (MQ=255)                                                                                                                                       gAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGt        >  2:852635/1‑140 (MQ=255)                                                                                                                                             aCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa  <  1:1080062/140‑1 (MQ=255)                                                                                                                                             aCCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa  <  1:71865/140‑1 (MQ=255)                                                                                                                                             |                                                                                                                                            TGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAA‑TGAGTTTTTTTGATGAGTTGAAAACCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAACCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA  >  NC_000913/4628510‑4628788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑