Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,917,373	C→T	M1M (ATG→ATA) †	atpD ←	ATP synthase F1 complex subunit beta

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,917,373	0	C	T	100.0%	312.9 / NA	91	M1M (ATG→ATA) †	atpD	ATP synthase F1 complex subunit beta
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (37/54);  total (37/54)

GCTGAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGC  >  NC_000913/3917243‑3917499                                                                                                                                   |                                                                                                                               gctgAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAAt                                                                                                                       <  2:1198759/140‑1 (MQ=255)    gAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCct                                                                                                                    >  1:313625/1‑140 (MQ=255)      aCTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCctct                                                                                                                  <  1:595729/140‑1 (MQ=255)      aCTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCctct                                                                                                                  <  1:1572370/140‑1 (MQ=255)      aCTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCctct                                                                                                                  <  1:113522/140‑1 (MQ=255)      aCTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCctct                                                                                                                  <  2:239375/140‑1 (MQ=255)         tCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACg                                                                                                               >  1:254747/1‑140 (MQ=255)            aGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGaaa                                                                                                            >  2:905682/1‑140 (MQ=255)               aCCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATaa                                                                                                         <  1:1116941/140‑1 (MQ=255)               aCCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATaa                                                                                                         <  2:170756/140‑1 (MQ=255)                ccAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAAc                                                                                                        <  1:1154123/140‑1 (MQ=255)                ccAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAAc                                                                                                        <  2:313625/140‑1 (MQ=255)                 cAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATc                                                                                                                      >  2:139719/1‑125 (MQ=255)                 cAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATc                                                                                                                      <  1:139719/125‑1 (MQ=255)                   gACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTg                                                                                                     >  1:1151682/1‑140 (MQ=255)                        tCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTaa                                                                                                >  1:636934/1‑140 (MQ=255)                                aTTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCgcggc                                                                                        >  1:317521/1‑140 (MQ=255)                                    tGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGcc                                                                                    >  1:519683/1‑140 (MQ=255)                                      cACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGcccc                                                                                  <  1:1520498/140‑1 (MQ=255)                                            aaGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGAGTACCTGGACAATCTTTCCAGTAGCTATCTTAAAGCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGAc                                                                            <  1:1383888/140‑1 (MQ=255)                                                 cATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGAtct                                                                       >  1:359320/1‑140 (MQ=255)                                                   tCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCg                                                                     >  1:985920/1‑140 (MQ=255)                                                   tCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCg                                                                     >  1:611859/1‑140 (MQ=255)                                                   tCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCg                                                                     >  1:768594/1‑140 (MQ=255)                                                   tCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCg                                                                     >  2:149897/1‑140 (MQ=255)                                                   tCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCg                                                                     >  1:1376033/1‑140 (MQ=255)                                                    cGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCgg                                                                    >  2:828020/1‑140 (MQ=255)                                                     gTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGt                                                                   <  1:221841/140‑1 (MQ=255)                                                     gTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGt                                                                   <  1:262243/140‑1 (MQ=255)                                                      tACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTg                                                                  <  2:85830/140‑1 (MQ=255)                                                        cacGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAg                                                                <  2:926495/140‑1 (MQ=255)                                                        cacGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAg                                                                <  2:1376033/140‑1 (MQ=255)                                                        cacGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAg                                                                <  2:749828/140‑1 (MQ=255)                                                           gcgctGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             >  1:227230/1‑140 (MQ=255)                                                           gcgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTTTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             <  2:254747/140‑1 (MQ=255)                                                           gcgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             <  1:1229943/140‑1 (MQ=255)                                                           gcgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             >  1:399880/1‑140 (MQ=255)                                                           gcgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             <  2:125151/140‑1 (MQ=255)                                                           gcgcgGTACGGCATCCTGAGGGAATTAGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             >  2:1117367/1‑140 (MQ=255)                                                            cgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCgaga                                                                             <  2:109486/123‑1 (MQ=255)                                                            cgcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCgaga                                                                             >  1:109486/1‑123 (MQ=255)                                                             gcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCt                                                           <  2:768594/140‑1 (MQ=255)                                                             gcgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCt                                                           <  1:905682/140‑1 (MQ=255)                                                              cgGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTg                                                          >  1:232649/1‑140 (MQ=255)                                                               ggTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGa                                                         >  2:1013380/1‑140 (MQ=255)                                                                gTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCt                                                           <  2:240570/137‑1 (MQ=255)                                                                gTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCt                                                           >  1:240570/1‑137 (MQ=255)                                                                gTACGGCATCCTGAGGGAATTAGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAg                                                        <  1:1117367/140‑1 (MQ=255)                                                                     gCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATg                                                   >  2:1582866/1‑140 (MQ=255)                                                                         ccTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             <  2:286718/126‑1 (MQ=255)                                                                         ccTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTc                                                             >  1:286718/1‑126 (MQ=255)                                                                         ccTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTgg                                               >  1:1503120/1‑140 (MQ=255)                                                                           tGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGcc                                             >  1:797580/1‑140 (MQ=255)                                                                           tGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGcc                                             >  1:210129/1‑140 (MQ=255)                                                                             aGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTg                                           >  1:931615/1‑140 (MQ=255)                                                                               ggAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGAc                                         <  2:227230/140‑1 (MQ=255)                                                                                gAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACg                                        <  2:611859/140‑1 (MQ=255)                                                                                  aTTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAg                                      <  1:949488/140‑1 (MQ=255)                                                                                   ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAg                                      >  2:1131516/1‑139 (MQ=255)                                                                                   ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAg                                      >  2:1389423/1‑139 (MQ=255)                                                                                   ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAg                                      <  1:1131516/139‑1 (MQ=255)                                                                                   ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAg                                      <  1:1389423/139‑1 (MQ=255)                                                                                   ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGc                                     >  2:113941/1‑140 (MQ=255)                                                                                   ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGc                                     >  2:422946/1‑140 (MQ=255)                                                                                    tCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                    <  1:1183033/140‑1 (MQ=255)                                                                                    tCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                    <  2:519683/140‑1 (MQ=255)                                                                                    tCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                    <  2:985920/140‑1 (MQ=255)                                                                                    tCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                    <  1:828020/140‑1 (MQ=255)                                                                                    tCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                    <  2:1503120/140‑1 (MQ=255)                                                                                      gACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                  <  1:220816/140‑1 (MQ=255)                                                                                        cGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgt                                <  2:399880/140‑1 (MQ=255)                                                                                        cGTCAACTACGGCCCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAACCCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgt                                <  2:797580/140‑1 (MQ=255)                                                                                         gTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt                               <  2:1151682/140‑1 (MQ=255)                                                                                          tCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgttg                              <  2:636934/140‑1 (MQ=255)                                                                                           cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt                             <  2:317521/140‑1 (MQ=255)                                                                                            aaCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                            >  2:1462454/1‑140 (MQ=255)                                                                                             aCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtat                           <  1:113941/140‑1 (MQ=255)                                                                                                    cgcCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttg                                 >  1:1512565/1‑127 (MQ=255)                                                                                                    cgcCGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttg                                 <  2:1512565/127‑1 (MQ=255)                                                                                                      ccGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                  <  2:210129/140‑1 (MQ=255)                                                                                                       cGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                 <  2:232649/140‑1 (MQ=255)                                                                                                       cGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                 <  1:1069532/140‑1 (MQ=255)                                                                                                       cGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                 <  1:422946/140‑1 (MQ=255)                                                                                                       cGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                 <  1:1582866/140‑1 (MQ=255)                                                                                                       cGATTACCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                 <  2:359320/140‑1 (MQ=255)                                                                                                            aCCTGGACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctct            <  2:1550224/140‑1 (MQ=255)                                                                                                                ggACAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTaa        <  1:1462454/140‑1 (MQ=255)                                                                                                                   cAATCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa     >  1:1131298/1‑140 (MQ=255)                                                                                                                      tCTTTCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGc  >  1:1113220/1‑140 (MQ=255)                                                                                                                        tttCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAg                <  2:515809/124‑1 (MQ=255)                                                                                                                        tttCCAGTAGCTATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAg                >  1:515809/1‑124 (MQ=255)                                                                                                                                   |                                                                                                                               GCTGAACTTCCAGCACCAGACGCTCATTACCATTTTGCACCTCAAGAGCATCGTACACGCGCGGTACGGCATCCTGAGGGAATTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGC  >  NC_000913/3917243‑3917499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑