BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3232447	99 (0.860)	5 (0.040)	3/270	9.1	4.9%	coding (783/2019 nt)	fadH	2,4‑dienoyl‑CoA reductase
*	?	NC_000913	3232453 =	98 (0.870)	5 (0.040)	3/270	9.1	4.9%	coding (789/2019 nt)	fadH	2,4‑dienoyl‑CoA reductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 104 total aligned reads displayed.

ACTGTCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGATAT  >  NC_000913/3232309‑3232584

aCTGTCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGccc                                                                                                                                          >  1:1116171/1‑139 (MQ=255)

aCTGTCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCa                                                                                                                                          >  1:354684/1‑140 (MQ=255)

aCTGTCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCa                                                                                                                                          >  1:834898/1‑140 (MQ=255)

    tCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCCTTGGCTGGCATGAAGCACGTATTCCGACCATTTCCCCGcc                                                                                                                                      >  2:1209488/1‑140 (MQ=255)

    tCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCCCGcc                                                                                                                                      >  1:657701/1‑140 (MQ=255)

            cGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCcgc                                                                                                                              <  1:1045112/140‑1 (MQ=255)

              aCCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGCCC‑ATTATCAACACCCGCATTGGCTGGCATGAAACACGTATTCCGACCATTGCCACCCCCCTGCcgcgc                                                                                                                            >  2:1507264/1‑140 (MQ=255)

              aCCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTTGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGGGCcgcgc                                                                                                                            >  1:1532669/1‑140 (MQ=255)

              aCCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCcgcgc                                                                                                                            <  1:1315128/140‑1 (MQ=255)

              aCCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGGATTCCGACCATTTCCACGCCCGTGCcgcgc                                                                                                                            >  1:1923989/1‑140 (MQ=255)

               ccTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCcgcgcg                                                                                                                           <  1:1209488/140‑1 (MQ=255)

                cTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCgcgg                                                                                                                          <  2:354684/140‑1 (MQ=255)

                cTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCgcgg                                                                                                                          <  1:543721/140‑1 (MQ=255)

                   gTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGGCC‑CATATCAACACCGGGATTTGCTGGCATGAAGCACGGATTTCGCCCATTGCCCCCCCCCTGGCCCGCGgcgc                                                                                                                       >  2:741030/1‑140 (MQ=255)

                   gTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGgcgc                                                                                                                       <  1:1467990/140‑1 (MQ=255)

                    tCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCTCGTGCCGCGCGGCGCa                                                                                                                      <  1:1810276/140‑1 (MQ=255)

                      gAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCAtt                                                                                                                    <  1:548084/140‑1 (MQ=255)

                         gACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCcgcgcg                                                                                                                           <  2:1907676/130‑1 (MQ=255)

                         gACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCcgcgcg                                                                                                                           >  1:1907676/1‑130 (MQ=255)

                         gACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCcgcgc                                                                                                                            >  2:833368/1‑129 (MQ=255)

                         gACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCcgcgc                                                                                                                            <  1:833368/129‑1 (MQ=255)

                                 gACTTTTACCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCCTTGGCTGGGATGAAGCACGTATTCCGACCATTTCCACCCCCCTGCCGCCCGGCGCATTTAGCTggggcc                                                                                                         >  2:204644/1‑137 (MQ=255)

                                     tttGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCAcgcg                                                                                                     <  1:129449/140‑1 (MQ=255)

                                       tGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCa                                                                                                   <  1:599644/140‑1 (MQ=255)

                                        gCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCaa                                                                                                  <  2:834898/140‑1 (MQ=255)

                                           gAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCCGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACt                                                                                               >  2:1216486/1‑140 (MQ=255)

                                             aaCGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGa                                                                                             <  2:817166/140‑1 (MQ=255)

                                                         ggCGCAGGCCATTGAAGCGGCGGGCGCGACCAATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGtc                                                                                  >  2:653018/1‑140 (MQ=255)

                                                          gcgcAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGtctc                                                                                >  2:55998/1‑140 (MQ=255)

                                                               ggCCATTGAAGCGGCGGGCGCGCCC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGGATTCCGACCATTGCCACGCCCCTGCCGCGCCGCGCATTTAGCTGGGGCACCCGCAAACTGAAAGGCCACGGCTcgccgc                                                                           >  2:1375884/1‑140 (MQ=255)

                                                                gCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGcc                                                                          >  2:1120460/1‑140 (MQ=255)

                                                                gCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGcc                                                                          >  1:1213157/1‑140 (MQ=255)

                                                                gCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAACACGCATTCCCACCCTTGCCCCCCCCCTGCCGCCCGGCGCATTTAGCTGGGTCACGCCCAAACTGCAAAGCCACGCCCCgccgcc                                                                          >  2:724277/1‑140 (MQ=255)

                                                                 ccATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCg                                                                         <  1:1110074/140‑1 (MQ=255)

                                                                 ccATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCg                                                                         <  2:1656853/140‑1 (MQ=255)

                                                                    ttGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCg                                                                               >  1:1676421/1‑131 (MQ=255)

                                                                    ttGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCg                                                                               <  2:1676421/131‑1 (MQ=255)

                                                                      gAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGt                                                                    <  2:703971/140‑1 (MQ=255)

                                                                      gAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGt                                                                    <  1:1575549/140‑1 (MQ=255)

                                                                      gAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGt                                                                    <  1:1375884/140‑1 (MQ=255)

                                                                          cggcggGCCCGGCC‑ATTATCAACACCCGCATTTGCTGGCATGAAGCACGTATTCCGACCATTGCCCCCCCCGTGCCGCGCCGCGCATTTTGCTTGGTCACCCGCAAAATGAAAGGCCACCTCTCGCTGCCGCTGGTAacc                                                                >  2:1575549/1‑140 (MQ=255)

                                                                           ggcgggcgCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGGATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAacca                                                               >  2:1058789/1‑140 (MQ=255)

                                                                            gcgggcgCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAaccac                                                              >  2:1824656/1‑140 (MQ=255)

                                                                                gcgcGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAAc                                                          <  2:690741/140‑1 (MQ=255)

                                                                                gcgcGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAAc                                                          <  2:657701/140‑1 (MQ=255)

                                                                                 cgcgACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGt                                                                    <  2:1207057/129‑1 (MQ=255)

                                                                                 cgcgACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGt                                                                    >  1:1207057/1‑129 (MQ=255)

                                                                                     aCC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGAt                                                     <  2:1820148/140‑1 (MQ=255)

                                                                                         aTTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTaa                                                  <  1:1661723/140‑1 (MQ=255)

                                                                                         aTTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTaa                                                  <  1:321554/140‑1 (MQ=255)

                                                                                          ttATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAAc                                                 <  1:724277/140‑1 (MQ=255)

                                                                                          ttATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAAc                                                 <  1:1120460/140‑1 (MQ=255)

                                                                                            aTCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGa                                               >  2:893577/1‑140 (MQ=255)

                                                                                               aaCACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATcc                                            >  1:395992/1‑140 (MQ=255)

                                                                                                 cacCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGc                                          >  2:1013100/1‑140 (MQ=255)

                                                                                                 cacCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATT‑‑‑‑‑GCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGAt                                                     <  1:1124007/124‑1 (MQ=255)

                                                                                                 cacCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATT‑‑‑‑‑GCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGAt                                                     >  2:1124007/1‑124 (MQ=255)

                                                                                                  acCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCa                                         >  1:895576/1‑140 (MQ=255)

                                                                                                   ccGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAg                                        >  1:437396/1‑140 (MQ=255)

                                                                                                   ccGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAg                                        >  2:940100/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  2:1096553/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  1:1841643/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  1:628160/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  2:1507705/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  1:1139570/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  1:336429/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  1:1792937/1‑140 (MQ=255)

                                                                                                    cGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAgg                                       >  2:1134749/1‑140 (MQ=255)

                                                                                                      gCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGtt                                     >  1:947908/1‑140 (MQ=255)

                                                                                                      gCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGtt                                     >  2:835759/1‑140 (MQ=255)

                                                                                                      gCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGtt                                     <  1:1480275/140‑1 (MQ=255)

                                                                                                        aTTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGc                                   <  2:1213157/140‑1 (MQ=255)

                                                                                                        aTTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGc                                   <  1:835759/140‑1 (MQ=255)

                                                                                                           ggctggcATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTACCCACCAACCGGATTAACGTGCCGCAGGTTGCcgt                                <  2:437396/140‑2 (MQ=255)

                                                                                                           ggctggcATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCcga                                <  1:1507264/140‑1 (MQ=255)

                                                                                                           ggctggcATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCcga                                <  1:1840365/140‑1 (MQ=255)

                                                                                                           ggctggcATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCcga                                <  2:895576/140‑1 (MQ=255)

                                                                                                             ctggcATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCcgacg                              <  1:653018/140‑1 (MQ=255)

                                                                                                                 cATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGatat                          >  2:623804/1‑140 (MQ=255)

                                                                                                                 cATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGatat                          >  1:1489001/1‑140 (MQ=255)

                                                                                                                      aGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATtctct                     >  1:1864791/1‑140 (MQ=255)

                                                                                                                          cGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTcgcg                 >  2:746599/1‑140 (MQ=255)

                                                                                                                          cGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTcgcg                 >  1:1140572/1‑140 (MQ=255)

                                                                                                                              ttCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCgcggc             >  1:1001276/1‑140 (MQ=255)

                                                                                                                                ccGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGa           >  1:540969/1‑140 (MQ=255)

                                                                                                                                ccGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGa           <  2:1792937/140‑1 (MQ=255)

                                                                                                                                   aCCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACTATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGc        >  1:1525768/1‑140 (MQ=255)

                                                                                                                                   aCCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGc        >  2:1877886/1‑140 (MQ=255)

                                                                                                                                   aCCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGc        <  1:659765/140‑1 (MQ=255)

                                                                                                                                   aCCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGc        <  1:1877886/140‑1 (MQ=255)

                                                                                                                                       ttGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGat    <  1:893577/140‑1 (MQ=255)

                                                                                                                                       ttGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGat    >  1:1144318/1‑140 (MQ=255)

                                                                                                                                       ttGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGat    <  2:1140572/140‑1 (MQ=255)

                                                                                                                                       ttGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGat    <  1:623804/140‑1 (MQ=255)

                                                                                                                                       ttGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGat    <  1:1058789/140‑1 (MQ=255)

                                                                                                                                       ttGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGat    <  2:1139570/140‑1 (MQ=255)

                                                                                                                                       ttGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGat    <  1:720126/140‑1 (MQ=255)

                                                                                                                                        tGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGc        >  2:965549/1‑135 (MQ=255)

                                                                                                                                        tGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGc        <  1:965549/135‑1 (MQ=255)

                                                                                                                                         gCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGatat  >  1:572745/1‑140 (MQ=255)

ACTGTCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACC‑ATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGATAT  >  NC_000913/3232309‑3232584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.