BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2030707 =	108 (0.940)	4 (0.040)	4/260	8.3	3.8%	coding (212/471 nt)	vsr	DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway
*	?	NC_000913	= 2030703	100 (0.930)	4 (0.040)	4/260	8.3	3.8%	coding (216/471 nt)	vsr	DNA mismatch endonuclease of the very short patch (VSP) mismatch repair pathway
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

ACTCCCAGACAATCAATACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAGGCGC  >  NC_000913/2030570‑2030841

aCTCCCAGACAATCAATACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGtgatga                                                                                                                                      >  1:1715808/1‑140 (MQ=255)

 cTCCCAGACAATCAATACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGtgatgat                                                                                                                                     >  2:1732591/1‑140 (MQ=255)

 cTCCCAGACAATCAATACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCCCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGtgatgat                                                                                                                                     >  2:194685/1‑140 (MQ=255)

       gACAATCAATACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGcc                                                                                                                               <  2:1079565/140‑1 (MQ=255)

       gACAATCAATACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGcc                                                                                                                               >  1:1438945/1‑140 (MQ=255)

           atcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGaa                                                                                                                           <  1:1059405/140‑1 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGtgatga                                                                                                                                      >  1:1178052/1‑128 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGtgatga                                                                                                                                      <  2:1178052/128‑1 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAag                                                                                                                          >  1:413857/1‑140 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAag                                                                                                                          >  2:1145385/1‑140 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAag                                                                                                                          >  2:1496999/1‑140 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAag                                                                                                                          >  2:1602246/1‑140 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAag                                                                                                                          >  2:1938501/1‑140 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAag                                                                                                                          >  2:36042/1‑140 (MQ=255)

            tcaatACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAag                                                                                                                          >  1:1063842/1‑140 (MQ=255)

               atACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAagcag                                                                                                                       <  1:1732591/140‑1 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTTGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  2:292946/140‑1 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGcc                                                                                                                     >  1:1270395/1‑139 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGcc                                                                                                                     <  2:1270395/139‑1 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  2:1715808/140‑1 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  2:1397759/140‑1 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  2:1085319/140‑1 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    >  2:691543/1‑140 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    >  1:828323/1‑140 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  2:1063842/140‑1 (MQ=255)

                  cgcgCCAGCCGAGTTCCTGCAAGCGACTGATATCCCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  1:194685/140‑1 (MQ=255)

                    cgcCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATg                                                                                                                  >  2:1831775/1‑140 (MQ=255)

                       cAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  1:991544/135‑1 (MQ=255)

                        aGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAG‑‑‑TGATGATGCCAGAAGCAGCCATGGGt                                                                                                               <  2:178700/136‑1 (MQ=255)

                          ccGAGTTCCTGCAAGCGACTGATATCGCGGCGACCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGcc                                                                                                                     >  2:823270/1‑131 (MQ=255)

                             aGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAatat                                                                                                         >  1:1761697/1‑140 (MQ=255)

                               ttCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCa                                                                                                       >  1:310177/1‑140 (MQ=255)

                               ttCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGACACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    <  2:331347/127‑1 (MQ=255)

                               ttCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGACACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCa                                                                                                                    >  1:331347/1‑127 (MQ=255)

                                   tGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCa                                                                                                   >  1:1443702/1‑140 (MQ=255)

                                    gCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAg                                                                                                  <  1:988684/140‑1 (MQ=255)

                                    gCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAg                                                                                                  <  2:1761697/140‑1 (MQ=255)

                                       aGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGa                                                                                               <  2:1443702/140‑1 (MQ=255)

                                               atatCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCa                                                                                                       >  1:1554902/1‑124 (MQ=255)

                                               atatCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATtcatc                                                                                       <  1:1602246/140‑1 (MQ=255)

                                                      ggcgATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTC‑TCAACGACaa                                                                               >  2:718476/1‑140 (MQ=255)

                                                          aTCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAAt                                                                            >  1:1590334/1‑140 (MQ=255)

                                                           tCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATc                                                                           >  1:390484/1‑140 (MQ=255)

                                                                cTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGAc                                                                      >  2:1683583/1‑140 (MQ=255)

                                                                     cATTTTTACCTATCTTCTCCAGCCAGAACTCTGTTCGAGTCGCAGGCACTTTAAACAGATAGCAG‑‑‑TGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGc                                                              >  1:480627/1‑140 (MQ=255)

                                                                       tttttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCggg                                                               <  2:886847/140‑1 (MQ=255)

                                                                        ttttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTC‑TCAACGACAAAATCCGGACGTCCGGGCa                                                             <  1:718476/140‑1 (MQ=255)

                                                                         tttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCa                                                             >  2:1943526/1‑140 (MQ=255)

                                                                          ttACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAg                                                            >  2:1416597/1‑140 (MQ=255)

                                                                             ccTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACATATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACt                                                         >  2:784789/1‑140 (MQ=255)

                                                                             ccTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACt                                                         >  1:869320/1‑140 (MQ=255)

                                                                             ccTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACt                                                         >  1:1868774/1‑140 (MQ=255)

                                                                                aTCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCa                                                             >  2:488548/1‑133 (MQ=255)

                                                                                aTCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCa                                                             <  1:488548/133‑1 (MQ=255)

                                                                                  cttctCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGt                                                    >  2:1287378/1‑140 (MQ=255)

                                                                                      tcCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTg                                                >  2:1425720/1‑140 (MQ=255)

                                                                                       ccagccagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGa                                               >  2:630997/1‑140 (MQ=255)

                                                                                        cagccagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGaa                                              >  1:1779845/1‑140 (MQ=255)

                                                                                        cagccagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGaa                                              <  2:413857/140‑1 (MQ=255)

                                                                                        cagccagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGaa                                              <  2:1590334/140‑1 (MQ=255)

                                                                                        cagccagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGaa                                              >  1:500356/1‑140 (MQ=255)

                                                                                           ccagAACTCTGTTCGAGTCGCAGGCACTTTAAACAGATAGCAG‑‑‑TGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGaa                                        <  2:480627/140‑1 (MQ=255)

                                                                                           ccagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAAcgc                                           >  1:1884213/1‑140 (MQ=255)

                                                                                           ccagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAAcgc                                           >  1:1602270/1‑140 (MQ=255)

                                                                                            cagAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAAcgcg                                          <  1:1943526/140‑1 (MQ=255)

                                                                                             agAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGa                                         >  2:1348455/1‑140 (MQ=255)

                                                                                               aaCTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGaaa                                       >  2:215846/1‑140 (MQ=255)

                                                                                                 cTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATg                                     <  2:1438945/140‑1 (MQ=255)

                                                                                                    ggTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCa                                  >  2:370124/1‑140 (MQ=255)

                                                                                                          aGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTTAACGCGAAATGCCAGGCCCt                            <  2:310177/140‑1 (MQ=255)

                                                                                                          aGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGc                                    >  2:639529/1‑132 (MQ=255)

                                                                                                          aGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGc                                    <  1:639529/132‑1 (MQ=255)

                                                                                                          aGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCt                            <  1:1287378/140‑1 (MQ=255)

                                                                                                          aGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCt                            >  2:328101/1‑140 (MQ=255)

                                                                                                           gTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTg                           >  2:1260410/1‑140 (MQ=255)

                                                                                                            tCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGc                          <  1:1683583/140‑1 (MQ=255)

                                                                                                             cGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGcc                         <  1:920684/140‑1 (MQ=255)

                                                                                                             cGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGcc                         <  2:1602270/140‑1 (MQ=255)

                                                                                                              gCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGccc                        <  1:328101/140‑1 (MQ=255)

                                                                                                              gCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGccc                        >  1:109730/1‑140 (MQ=255)

                                                                                                              gCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGccc                        <  1:1831775/140‑1 (MQ=255)

                                                                                                               cAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCg                       <  1:1348455/140‑1 (MQ=255)

                                                                                                               cAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCg                       <  2:828323/140‑1 (MQ=255)

                                                                                                                aGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCgg                      >  1:388946/1‑140 (MQ=255)

                                                                                                                aGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCgg                      >  2:1694756/1‑140 (MQ=255)

                                                                                                                    aCTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTaa                  >  1:1195540/1‑140 (MQ=255)

                                                                                                                     cTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAAc                 >  2:1643553/1‑140 (MQ=255)

                                                                                                                        tAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGa              <  1:370124/140‑1 (MQ=255)

                                                                                                                               aTAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGa       >  1:319378/1‑140 (MQ=255)

                                                                                                                                tAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAg      >  2:877385/1‑140 (MQ=255)

                                                                                                                                tAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAg      >  2:1104425/1‑140 (MQ=255)

                                                                                                                                tAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAg      >  1:317938/1‑140 (MQ=255)

                                                                                                                                tAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAg      >  1:385267/1‑140 (MQ=255)

                                                                                                                                tAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGCTAACAGACTGGCGAg      >  1:1274428/1‑140 (MQ=255)

                                                                                                                                 aGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAgg     <  1:440762/140‑1 (MQ=255)

                                                                                                                                 aGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAgg     <  1:1877624/140‑1 (MQ=255)

                                                                                                                                 aGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAgg     <  1:1260410/140‑1 (MQ=255)

                                                                                                                                 aGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAgg     <  1:1171350/140‑1 (MQ=255)

                                                                                                                                 aGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAgg     <  1:1145385/140‑1 (MQ=255)

                                                                                                                                    aGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAGgcgc  <  2:109730/140‑1 (MQ=255)

ACTCCCAGACAATCAATACGCGCCAGCCGAGTTCCTGCAAGCGACTGATATCGCGGCGATCGCGCTCAACATTTTTACCTATCTTCTCCAGCCAGAACTCGGTTCGAGTCGCAGGCACTTTAAACAGATAGCAGTGATGATGATGCCAGAAGCAGCCATGGGTAAATATCACGCAGCGATATTCATCAACGACAAAATCCGGACGTCCGGGCAGACTGGCGTCCTGAACGCGAAATGCCAGGCCCTGCCCGGTTAACAGACTGGCGAGGCGC  >  NC_000913/2030570‑2030841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.