| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3653230 | NA (NA) | 96 (0.840) | 50/276 | 0.8 | 89.7% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 3766089 | 11 (0.100) | coding (3907/4134 nt) | rhsA | rhs element protein RhsA | |||||
Only 100 of 265 total aligned reads displayed.
GCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATTGT > NC_000913/3765950‑3766229 | tatatagtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGa > 1:1209629‑M2/137‑140 (MQ=255) cAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGgg > 1:1476829‑M2/1‑138 (MQ=255) ttCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaag < 2:1621518‑M2/140‑6 (MQ=255) ttCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaag < 1:606238‑M2/140‑6 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATaa > 1:295300‑M2/132‑140 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATaa > 1:1163311‑M2/132‑140 (MQ=255) agtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATaa > 1:763680‑M2/132‑140 (MQ=255) gtcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAAc < 2:1504069‑M2/10‑1 (MQ=255) tcgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGat < 2:293983‑M2/5‑1 (MQ=255) cgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAAc < 1:1520947‑M2/10‑1 (MQ=255) cgtaacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACaa > 1:348444‑M2/129‑140 (MQ=255) tGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcg < 1:131775‑M2/140‑11 (MQ=255) tGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcg < 1:1016283‑M2/140‑11 (MQ=255) taacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATg > 1:569150‑M2/127‑140 (MQ=255) taacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATg > 2:397467‑M2/127‑140 (MQ=255) taacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATg > 1:640499‑M2/127‑140 (MQ=255) aacagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGa > 2:48832‑M2/126‑140 (MQ=255) acagccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGAt > 1:1333741‑M2/125‑140 (MQ=255) ccAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaaca > 2:1016283‑M2/1‑126 (MQ=255) aaaaGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaag > 2:317585‑M2/1‑124 (MQ=255) ccatttttttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCt > 1:1392659‑M2/121‑140 (MQ=255) gCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccc > 1:1798132‑M2/1‑120 (MQ=255) ttcttcagaaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTgg < 1:469693‑M2/28‑1 (MQ=255) gCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgata > 2:1539120‑M2/1‑115 (MQ=255) aaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTg > 2:1316684‑M2/105‑140 (MQ=255) aaggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTg > 1:1882703‑M2/105‑140 (MQ=255) ggaatttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCa < 2:1599372‑M2/38‑1 (MQ=255) atttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaatcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGac < 2:1422509‑M2/41‑1 (MQ=255) atttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGac < 1:1180939‑M2/41‑1 (MQ=255) atttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGac < 2:196034‑M2/41‑1 (MQ=255) atttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGac < 1:738614‑M2/41‑1 (MQ=255) ttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatgaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac < 2:1339734‑M2/43‑1 (MQ=255) ttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac < 2:763680‑M2/43‑1 (MQ=255) ttttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac < 2:434834‑M2/43‑1 (MQ=255) tttaaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAcaca < 2:1392659‑M2/44‑1 (MQ=255) taaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac > 1:354063‑M2/95‑137 (MQ=255) taaaccggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGacac < 2:354063‑M2/43‑1 (MQ=255) aTGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 1:1621518‑M2/1‑93 (MQ=255) ggcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAAc > 2:593153‑M2/89‑140 (MQ=255) gcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACt < 1:197052‑M2/53‑1 (MQ=255) gcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACt > 1:828444‑M2/88‑140 (MQ=255) gcttgttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACt > 1:1043429‑M2/88‑140 (MQ=255) gttgcagaaatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATc < 2:640499‑M2/57‑1 (MQ=255) gCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 2:1116190‑M2/1‑82 (MQ=255) tGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 1:488799‑M2/1‑78 (MQ=255) aatgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAAt < 2:717788‑M2/65‑1 (MQ=255) tgcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGACAATGa > 1:1270749‑M2/74‑140 (MQ=255) gcctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGAc > 2:1684926‑M2/73‑140 (MQ=255) cctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACa > 2:530465‑M2/72‑140 (MQ=255) cctgatcaagacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACa > 2:113914‑M2/72‑140 (MQ=255) tggtggAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 1:1694195‑M2/1‑70 (MQ=255) gtggAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga > 1:879971‑M2/1‑68 (MQ=255) gacaaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATg < 1:1072879‑M2/78‑1 (MQ=255) gAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 1:1408323‑M2/1‑65 (MQ=255) caaatgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAc < 1:593153‑M2/80‑1 (MQ=255) atgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGa > 2:1366617‑M2/58‑140 (MQ=255) atgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGa > 1:96937‑M2/58‑140 (MQ=255) atgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGa > 1:815155‑M2/58‑140 (MQ=255) atgtcgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGa > 1:907724‑M2/58‑140 (MQ=255) cgccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCt > 1:627389‑M2/54‑140 (MQ=255) gccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACataat < 2:95103‑M2/73‑1 (MQ=255) gccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTg > 1:1590438‑M2/53‑140 (MQ=255) gccattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTg > 2:1649416‑M2/53‑140 (MQ=255) cattttcatcaaagcgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGa < 2:853719‑M2/90‑1 (MQ=255) caAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc < 2:338815‑M2/140‑92 (MQ=255) caAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 2:1931995‑M2/1‑49 (MQ=255) cgcgtagcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGaaaaaa < 1:397467‑M2/104‑1 (MQ=255) cgcgtagcaatgttgcctttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAAc > 1:430364‑M2/36‑140 (MQ=255) tctctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 2:548786‑M2/140‑107 (MQ=255) tctctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 2:900138‑M2/140‑107 (MQ=255) tctctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 2:1802408‑M2/140‑107 (MQ=255) agcaatgttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGa < 1:1126001‑M2/109‑1 (MQ=255) ctctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc < 1:695378‑M2/140‑108 (MQ=255) tctAATATTGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca < 2:1872126‑M2/140‑109 (MQ=255) gttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAtg < 1:1848311‑M2/115‑1 (MQ=255) gttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAtg < 2:1027447‑M2/115‑1 (MQ=255) ttgccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGAtgt > 2:636762‑M2/25‑140 (MQ=255) gccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGa < 2:81266‑M2/118‑1 (MQ=255) tGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc < 1:1930255‑M2/140‑117 (MQ=255) tGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 1:1295047‑M2/1‑24 (MQ=255) tGAATAATCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 2:1295047‑M2/122‑99 (MQ=255) ccttttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGa > 1:1762203‑M2/22‑130 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg < 1:1864037‑M2/140‑119 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg < 2:1761479‑M2/140‑119 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg < 2:881038‑M2/140‑119 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccg < 2:1730928‑M2/140‑119 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag > 2:439493‑M2/1‑22 (MQ=255) aataatCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag < 1:439493‑M2/135‑114 (MQ=255) tttttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTa < 1:1561150‑M2/122‑1 (MQ=255) ttttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACtt < 2:1209629‑M2/125‑1 (MQ=255) tCCGGGACTAGCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga < 2:21710‑M2/140‑124 (MQ=255) ttcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCa < 2:1163311‑M2/127‑1 (MQ=255) tcgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAg < 1:1649416‑M2/128‑1 (MQ=255) cgccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAgg < 2:1270749‑M2/129‑1 (MQ=255) ccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGTaa < 2:1234079‑M2/131‑1 (MQ=255) ccatttactTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGaa < 1:542941‑M2/131‑1 (MQ=255) gCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 1:375852‑M2/140‑134 (MQ=255) gCATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 2:201334‑M2/140‑134 (MQ=255) gATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTa > 2:1853788/1‑132 (MQ=255) gATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAattga < 1:845660/137‑1 (MQ=255) | GCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATTGT > NC_000913/3765950‑3766229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |