Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	753,114	0	G	T	21.9%	230.0 / 18.1	82	intergenic (‑319/+71)	ybgD/gltA	putative fimbrial protein YbgD/citrate synthase
Reads supporting (aligned to +/- strand):  ref base G (53/11);  new base T (0/18);  total (53/29)
Fisher's exact test for biased strand distribution p-value = 5.91e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCA  >  NC_000913/752977‑753251                                                                                                                                          |                                                                                                                                           aTTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGtt                                                                                                                                          <  1:722411/140‑1 (MQ=255)      cATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑c                                                                                                                                    <  1:62851/140‑1 (MQ=255)             ttATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATaaa                                                                                                                             >  2:277081/1‑140 (MQ=255)                taAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAAt                                                                                                                          >  2:1872445/1‑140 (MQ=255)                   aTGCAACTACCATAAATTTTTTAATTAAAAGTATTGGTTTGCTGATAATTTGAGTTTTTCTTTTTTTTTTAAATATCTATATAGGTTTTTAAATGGTTTTTATTTTTAAATTTTTTTGTGTTTAGG‑AATAAAAAAATCac                                                                                                                       <  2:384467/140‑2 (MQ=255)                     gCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAAcc                                                                                                                     >  1:1456149/1‑140 (MQ=255)                      cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGTTTTTCTATTTTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAAccc                                                                                                                    <  1:1577966/140‑1 (MQ=255)                      cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAAccc                                                                                                                    >  1:1293848/1‑140 (MQ=255)                      cGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAAccc                                                                                                                    >  2:1280980/1‑140 (MQ=255)                       gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCg                                                                                                                   >  1:491608/1‑140 (MQ=255)                       gACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCg                                                                                                                   >  1:410748/1‑140 (MQ=255)                        aCTACCATGAATTTTTTAATTGAAAGTTTTGGGTTGCTGATAATTTGAGCTTTTTTTTTTTTTTTAAATATCTATATAGGTCTTTTAATGGATTTTTTTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGc                                                                                                                  <  1:1276425/140‑1 (MQ=255)                                   ttttttAATTGAAAGTATTGGGTTGCTGATATTTTGAGTTTTTTTATTTTTTTTAAATATCTATATAGGTCTTTTAATGGATTTTTTTTTTAAATTTTTTTGTGTTTAGG‑CATAAAAAAATCACCCCGCCATATGAAcgg                                                                                                       <  2:1009857/139‑1 (MQ=255)                                   ttttttAATTAAAAGTATTGGGTTGTTAATATTTTGGGTTTTTTTTTTTTTTTAAAATATCTATATAGGTCTTTAAATGGTTTTTTTTTTTAAATTTTTTGGTTTTTAGG‑AATAAAAAAATCAACCCGCCATATGAAcgg                                                                                                       <  2:410748/139‑1 (MQ=255)                                      tttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAAcggcgg                                                                                                    >  2:373083/1‑140 (MQ=255)                                      tttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAAcggcgg                                                                                                    >  1:202785/1‑140 (MQ=255)                                       ttAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCggg                                                                                                   >  1:1914114/1‑140 (MQ=255)                                                         ttGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTTCAAAtt                                                                                 >  2:130556/1‑140 (MQ=255)                                                            cTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGc                                                                              >  2:980870/1‑140 (MQ=255)                                                                tAATTTGAGTTTTTTTTTTTTTTTTAAATTTTTATATGGGTCTGTTAATGTATTTTTTTTTTACATTTTTTTGTTTTTAGG‑AATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATc                                                                          <  2:494463/140‑1 (MQ=255)                                                                 attttGAGTTTTTTTTTTTTTTTAAAATTTTTATATAGTTTTTTAAATGGTTTTTTTTTTTAAATTTTTTTGTTTTTAGG‑AATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCa                                                                         <  2:1254700/138‑1 (MQ=255)                                                                      gAGCTGTTCTTTTCTTTTTAAATATCTATATAGGTTTGTTAATGGATTTTTTTTTTACAATTTTTTGTTTTTAGG‑CATATAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCAt                                                                    <  1:1472920/140‑1 (MQ=255)                                                                        gtttttttATTCTTTTTAAATATTTATATAGTTCTTTTAATGGTTTTTTTTTTTAAATTTTTTTGTTTTAAGT‑CATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                  <  2:1456149/133‑1 (MQ=255)                                                                        gCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTa                                                                  <  1:872205/140‑1 (MQ=255)                                                                                   ttttttAAATATTTATATAGGTCTGTTAATGGTTTTTATTTTTACATTTTTTTGTTTTTAGG‑AATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                       <  2:1040107/139‑1 (MQ=255)                                                                                   ttttttAAATATCTATATAGGTTTTTTAATGGATTTTATTTTTACATTTTTTTGTTTTTAGG‑AATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatat                                                       <  2:505457/139‑1 (MQ=255)                                                                                    tttttAAATATTTATATAGTTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATc                                                      <  2:2084/140‑1 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCGTATGAACGGCGGGTTTAAATATTTACAACTTAGCAATCAACCATTAACCCTTGATATTGc                                                    >  2:759688/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTATAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                    >  1:949724/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTGCAAATTAACAAACAACCATTAACGCTTGATATCGc                                                    >  2:367533/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGatctgtc                                                    >  1:1881045/1‑135 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                    >  2:550548/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                    >  2:1152607/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                    >  1:764949/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                    >  2:1638675/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                    >  1:877402/1‑140 (MQ=255)                                                                                      tttAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGc                                                    >  1:1745925/1‑140 (MQ=255)                                                                                         aaaTATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCttt                                                 >  1:827454/1‑140 (MQ=255)                                                                                           atatCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTa                                               >  1:505457/1‑140 (MQ=255)                                                                                                    taGGTCTGTTAATGGATTTTATTTTTAAATTTTTTTGTGTTTAGG‑CATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                      <  1:1080434/140‑1 (MQ=255)                                                                                                    ggggTTTGTAAGTGTATTTTATTTTTACATTTTTTTGT‑TTTAGGCCATATAAAAATCTCCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGt                                      <  2:1293848/138‑1 (MQ=255)                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                   >  1:1057969/1‑140 (MQ=255)                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                   >  1:709923/1‑140 (MQ=255)                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGtttt                                   >  1:579312/1‑140 (MQ=255)                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAATCGCGtttt                                   >  2:1104163/1‑140 (MQ=255)                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTAAAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAAACGCGtttt                                   >  2:543091/1‑140 (MQ=255)                                                                                                       gTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGGTTAAATATTTACAACTTAGCAATCAAACATTAACGCTTGATATCCCTTTTTAAATCGCGtttt                                   >  1:1396007/1‑140 (MQ=255)                                                                                                         ttGTTAATGGTTTTTTTTTTTAAATTTTTTTTTTTTTAGA‑AATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                 <  2:877402/139‑1 (MQ=255)                                                                                                         cTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTc                                 <  1:550548/140‑1 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                >  2:1024323/1‑140 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                >  2:292685/1‑140 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                >  1:1461982/1‑140 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                >  1:1395114/1‑140 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                >  2:767266/1‑140 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                >  2:1122851/1‑140 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCa                                >  1:746283/1‑140 (MQ=255)                                                                                                          tGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTGATATTGCTTTTAAAGTCGCGTTTTTcc                                >  2:1824558/1‑139 (MQ=255)                                                                                                           tttAATGTTTTTTTTTTTTACATTTTTTTGTTTTTAGG‑AATAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                               <  2:827454/139‑1 (MQ=255)                                                                                                           tttAATGTTTTTTTTTTTTAAATTTTTTTGTTTTTAGG‑AATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                               <  2:725254/139‑1 (MQ=255)                                                                                                           tttAATGTATTTTTTTTTTACATTTTTTTGTGTTTAGC‑AATATAAAACTCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                               <  2:491608/139‑1 (MQ=255)                                                                                                           tttAATGGTTTTTTTTTTTACATTTTTTTGTTTTTAGG‑AATAAAAAAAACAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                               <  2:1461982/139‑1 (MQ=255)                                                                                                           tttAATGGATTTTATTTTTACATTTTTTTGTTTTTAGG‑CATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                               <  2:1642876/139‑1 (MQ=255)                                                                                                           gTTATTGTATTTTTTTTTTACATTTTTTTGTTTTTAGG‑CAAAAAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCat                               <  1:1824558/140‑1 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  2:629203/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  1:1486846/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  1:1577172/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  1:1642876/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  1:1054948/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  1:169816/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  2:236600/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  1:725254/1‑140 (MQ=255)                                                                                                            ttAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGGTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCata                              >  2:1362071/1‑140 (MQ=255)                                                                                                              aatgttttttttttttAAATTTTTTTGTTTTTAGG‑AATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                            <  1:373083/134‑1 (MQ=255)                                                                                                              aatgttttttattttTACATTTTTTTTTTTTTAGA‑AATATAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                            <  2:1745925/134‑1 (MQ=255)                                                                                                              aaTGTATTTTATTTTTACAATTTTTTGTTTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                            <  1:400283/140‑1 (MQ=255)                                                                                                              aaTGGATTTTATTTTTAAATTTTTTTGTGTTTAGG‑CATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATc                            <  1:1111970/140‑1 (MQ=255)                                                                                                                 ggATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                         >  2:72076/1‑140 (MQ=255)                                                                                                                 ggATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAAAGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTg                         >  2:276905/1‑140 (MQ=255)                                                                                                                   tttttttttttAAATTTTTTTGTTTTTAGG‑CATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGta                       <  2:709923/139‑1 (MQ=255)                                                                                                                    ttttttttttAAAATTTTTTGTTTTTAGG‑AATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTCCATATCCTGtat                      <  2:1792109/140‑1 (MQ=255)                                                                                                                      ttattttTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                    >  2:146521/1‑140 (MQ=255)                                                                                                                      ttattttTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                    >  2:616243/1‑140 (MQ=255)                                                                                                                      ttattttTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATAc                    >  1:1086001/1‑140 (MQ=255)                                                                                                                              aCAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcg            >  1:1792109/1‑140 (MQ=255)                                                                                                                                atttttttGTTTTTAGG‑AATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg          <  2:1395114/138‑1 (MQ=255)                                                                                                                                aaTTTTTTGTGTTTAGA‑AATAAAAAAACCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGAcgcg          <  2:202785/140‑1 (MQ=255)                                                                                                                                   ttttttTGTTTAGC‑AATATAAAAATCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGAc       <  1:367533/140‑1 (MQ=255)                                                                                                                                       tgttTTTAGG‑AATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc   <  2:147270/140‑1 (MQ=255)                                                                                                                                       tgttTTTAGG‑AATAAAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc   <  2:427070/140‑1 (MQ=255)                                                                                                                                       tgttTTTAGG‑AATAAAAAAACCACCCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGc   <  2:1057969/140‑1 (MQ=255)                                                                                                                                        gtgtTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCa  <  1:767266/140‑1 (MQ=255)                                                                                                                                          |                                                                                                                                           ATTTTCATAGGGTTATAAATGCGACTACCATGAAGTTTTTAATTGAAAGTATTGGGTTGCTGATAATTTGAGCTGTTCTATTCTTTTTAAATATCTATATAGGTCTGTTAATGGATTTTATTTTTACAATTTTTTGTGTTTAGG‑CATATAAAAATCAACCCGCCATATGAACGGCGGGTTAAAATATTTACAACTTAGCAATCAACCATTAACGCTTGATATCGCTTTTAAAGTCGCGTTTTTCATATCCTGTATACAGCTGACGCGGACGGGCA  >  NC_000913/752977‑753251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑