BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,286,444	G→A	pseudogene (2471/2525 nt)	yejO ←	adhesin‑like autotransporter YejO

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,286,444	0	G	A	100.0%	405.3 / NA	118	pseudogene (2471/2525 nt)	yejO	adhesin‑like autotransporter YejO
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (63/55); total (63/55)

Only 100 of 120 total aligned reads displayed.

ACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTA  >  NC_000913/2286308‑2286579

accCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCa                                                                                                                                      <  1:913401/140‑1 (MQ=255)

 cccTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCa                                                                                                                                      >  1:1027794/1‑139 (MQ=255)

 cccTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCa                                                                                                                                      <  2:1027794/139‑1 (MQ=255)

 cccTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCAt                                                                                                                                     >  1:1688426/1‑140 (MQ=255)

    ttACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGc                                                                                                                                  <  2:1816278/140‑1 (MQ=255)

      aCGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCa                                                                                                                                >  1:509563/1‑140 (MQ=255)

            ggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGctg                                                                                                                          >  2:1471145/1‑140 (MQ=255)

            ggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGctg                                                                                                                          >  1:456843/1‑140 (MQ=255)

            ggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGctg                                                                                                                          <  1:1926101/140‑1 (MQ=255)

            ggttTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGctg                                                                                                                          >  1:1742697/1‑140 (MQ=255)

                        tCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGa                                                                                                              >  1:901628/1‑140 (MQ=255)

                        tCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGa                                                                                                              >  1:442186/1‑140 (MQ=255)

                         cTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGAc                                                                                                             <  2:1088440/140‑1 (MQ=255)

                         cTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGAc                                                                                                             <  1:1471145/140‑1 (MQ=255)

                            cAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGc                                                                                                                            <  1:1018236/122‑1 (MQ=255)

                            cAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGc                                                                                                                            >  2:1018236/1‑122 (MQ=255)

                              attaattCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCtt                                                                                                        >  2:642497/1‑140 (MQ=255)

                                  attCGATAAACAGCCCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCt                                                                                                         <  2:347937/135‑1 (MQ=255)

                                  attCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGCCCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACg                                                                                                    <  2:898216/140‑1 (MQ=255)

                                  attCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCCCACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACg                                                                                                    <  2:879477/140‑1 (MQ=255)

                                  attCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCt                                                                                                         >  1:347937/1‑135 (MQ=255)

                                  attCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACg                                                                                                    >  1:1818478/1‑140 (MQ=255)

                                  attCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACg                                                                                                    >  2:284204/1‑140 (MQ=255)

                                   ttCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGt                                                                                                   <  2:1742697/140‑1 (MQ=255)

                                   ttCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGt                                                                                                   <  2:901628/140‑1 (MQ=255)

                                   ttCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGt                                                                                                   >  2:709768/1‑140 (MQ=255)

                                    tCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGa                                                                                                              <  1:653650/128‑1 (MQ=255)

                                    tCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGa                                                                                                              >  2:653650/1‑128 (MQ=255)

                                    tCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTc                                                                                                  <  2:788111/140‑1 (MQ=255)

                                    tCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTc                                                                                                  >  1:1865554/1‑140 (MQ=255)

                                       aTAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCggg                                                                                               >  2:380118/1‑140 (MQ=255)

                                                ccGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  2:1846446/140‑1 (MQ=255)

                                                ccGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  2:1818478/140‑1 (MQ=255)

                                                ccGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  1:642497/140‑1 (MQ=255)

                                                ccGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  2:622312/140‑1 (MQ=255)

                                                ccGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  2:456843/140‑1 (MQ=255)

                                                 cGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  1:1144775/139‑1 (MQ=255)

                                                 cGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      >  2:1144775/1‑139 (MQ=255)

                                                  gTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGa                                                                                    <  2:509563/140‑1 (MQ=255)

                                                    gACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGAcc                                                                                  >  1:1611284/1‑140 (MQ=255)

                                                     acacATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCt                                                                                 >  2:1756519/1‑140 (MQ=255)

                                                           cacaGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGa                                                                                       <  2:1867974/128‑1 (MQ=255)

                                                           cacaGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGa                                                                                       >  1:1867974/1‑128 (MQ=255)

                                                           cacaGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGAcc                                                                                  >  1:1769395/1‑133 (MQ=255)

                                                           cacaGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGAcc                                                                                  <  2:1769395/133‑1 (MQ=255)

                                                              aGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      >  1:1475805/1‑126 (MQ=255)

                                                              aGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  2:1475805/126‑1 (MQ=255)

                                                                ccTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCt                                                                      >  1:959782/1‑140 (MQ=255)

                                                                ccTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCt                                                                      >  2:884951/1‑140 (MQ=255)

                                                                ccTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCt                                                                      >  1:364437/1‑140 (MQ=255)

                                                                  tGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGAt                                                                                      <  2:1496723/122‑1 (MQ=255)

                                                                   gTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGAt                                                                   >  1:813707/1‑140 (MQ=255)

                                                                   gTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGAt                                                                   >  2:239854/1‑140 (MQ=255)

                                                                    tttATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATa                                                                  >  1:1811130/1‑140 (MQ=255)

                                                                    tttATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATa                                                                  >  2:1847315/1‑140 (MQ=255)

                                                                     ttATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATaa                                                                 >  1:68525/1‑140 (MQ=255)

                                                                          ttCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGcc                                                            >  2:405839/1‑140 (MQ=255)

                                                                            cTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCAc                                                          <  2:68525/140‑1 (MQ=255)

                                                                              gTTATCAGAACTTCCAGACCACACCCGCCTGAGCATTCCACGGCGATTCTAGCACTGCACCATTGCCAAAGCTGACTGACAAATGACCGCTTAACGTCGTGGTAAACGATGACCTTATACCAGCCTGATAAACACCACtc                                                        >  2:1429295/1‑139 (MQ=255)

                                                                              gTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCAc                                                          >  1:375364/1‑138 (MQ=255)

                                                                              gTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCAc                                                          <  2:375364/138‑1 (MQ=255)

                                                                              gTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTg                                                        >  1:1184701/1‑140 (MQ=255)

                                                                              gTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTg                                                        >  1:716213/1‑140 (MQ=255)

                                                                                      aaCGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGc                                                <  2:1184701/140‑1 (MQ=255)

                                                                                      aaCGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGc                                                <  1:239854/140‑1 (MQ=255)

                                                                                       aCGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGcc                                               >  1:1334728/1‑140 (MQ=255)

                                                                                         gTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCAc                                                          >  2:93971/1‑127 (MQ=255)

                                                                                         gTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCAc                                                          <  1:93971/127‑1 (MQ=255)

                                                                                         gTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCcac                                             >  1:1666427/1‑140 (MQ=255)

                                                                                           ccAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCAAcat                                           <  1:1429295/140‑1 (MQ=255)

                                                                                            cAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCAcat                                           <  1:1490286/139‑1 (MQ=255)

                                                                                            cAGACCACACCCGACTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCAcat                                           >  2:1490286/1‑139 (MQ=255)

                                                                                              gACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCAcatcat                                        >  1:1658001/1‑140 (MQ=255)

                                                                                               aCCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCatt                                       >  2:812318/1‑140 (MQ=255)

                                                                                                   cacCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCAttatta                                   >  1:882387/1‑140 (MQ=255)

                                                                                                    acCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTaa                                  >  1:1741865/1‑140 (MQ=255)

                                                                                                    acCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTaa                                  >  1:1865156/1‑140 (MQ=255)

                                                                                                    acCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTaa                                  >  2:855361/1‑140 (MQ=255)

                                                                                                    acCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTaa                                  >  2:758539/1‑140 (MQ=255)

                                                                                                    acCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTaa                                  >  2:755850/1‑140 (MQ=255)

                                                                                                         ccTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCca                                              <  1:271721/123‑1 (MQ=255)

                                                                                                         ccTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCca                                              >  2:271721/1‑123 (MQ=255)

                                                                                                         ccTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTg                             <  2:1741865/140‑1 (MQ=255)

                                                                                                         ccTGAGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTg                             >  2:247076/1‑140 (MQ=255)

                                                                                                             aGTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGCAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCAt                         >  1:487926/1‑140 (MQ=255)

                                                                                                              gTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATc                        <  1:1612059/140‑1 (MQ=255)

                                                                                                              gTATTCCACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATc                        <  1:405839/140‑1 (MQ=255)

                                                                                                                    cACGGCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCAtt                  >  1:310610/1‑140 (MQ=255)

                                                                                                                       ggCGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAAc               >  2:1743497/1‑140 (MQ=255)

                                                                                                                         cGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCAt                   >  1:1005754/1‑134 (MQ=255)

                                                                                                                         cGATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACtt             >  2:1319537/1‑140 (MQ=255)

                                                                                                                          gATTCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCCTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACttt            <  1:855361/140‑1 (MQ=255)

                                                                                                                            ttCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCa          >  2:1369631/1‑140 (MQ=255)

                                                                                                                             tCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCAc         <  2:1334728/140‑1 (MQ=255)

                                                                                                                             tCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCAc         <  2:1340664/140‑1 (MQ=255)

                                                                                                                             tCTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCAACATCATTATTAAATTTGCCATCGTCATTAACTTTCAc         <  1:946878/140‑1 (MQ=255)

                                                                                                                              cTACCCCTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCAcc        <  1:751339/140‑1 (MQ=255)

                                                                                                                                  cccTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGt    <  1:812318/140‑1 (MQ=255)

                                                                                                                                  cccTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGt    <  2:1658001/140‑1 (MQ=255)

                                                                                                                                    cTGCACCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTa  >  1:81476/1‑140 (MQ=255)

ACCCTTACGGTTGGTTTTTTTATATCTGCAATTAATTCGATAAACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATTGCCATAGCTGACTGACAAATGACCGCTTAACGTCGGGGTAAACGATGACCTTATACCAGCCTGATAAACGCCACTGGTTCCAGCCACATCATTATTAAATTTGCCATCGTCATTAACTTTCACCTGGTTA  >  NC_000913/2286308‑2286579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`