BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,796,247	G→C	A192P (GCG→CCG)	csiR →	DNA‑binding transcriptional repressor CsiR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,796,247	0	G	C	100.0%	359.7 / NA	94	A192P (GCG→CCG)	csiR	DNA‑binding transcriptional repressor CsiR
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (50/44); total (50/44)

Only 100 of 102 total aligned reads displayed.

TTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAATTTTATCCG  >  NC_000913/2796112‑2796383

ttGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCcgcg                                                                                                                                      >  1:356111/1‑140 (MQ=255)

  gctgcAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCgag                                                                                                                                    >  2:415045/1‑140 (MQ=255)

     gcAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATa                                                                                                                                 >  1:1257775/1‑140 (MQ=255)

     gcAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATa                                                                                                                                 >  1:691648/1‑140 (MQ=255)

     gcAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATa                                                                                                                                 >  1:1426997/1‑140 (MQ=255)

       aaaTGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATAcc                                                                                                                               >  2:1075922/1‑140 (MQ=255)

       aaaTGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATAcc                                                                                                                               >  2:1276181/1‑140 (MQ=255)

         aTGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACcgc                                                                                                                             >  2:599642/1‑140 (MQ=255)

         aTGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACcgc                                                                                                                             >  1:680555/1‑140 (MQ=255)

         aTGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACcgc                                                                                                                             >  1:1418188/1‑140 (MQ=255)

                  cGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAg                                                                                                                    <  1:1941168/140‑1 (MQ=255)

                     ttgttTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGa                                                                                                                 >  1:485229/1‑140 (MQ=255)

                     ttgttTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGAAACCGCGCGCGCCAGTGa                                                                                                                 >  2:111602/1‑140 (MQ=255)

                       gttTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGt                                                                                                               >  2:95233/1‑140 (MQ=255)

                            aTCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATg                                                                                                          >  1:1437110/1‑140 (MQ=255)

                             tCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgc                                                                                                         >  1:367910/1‑140 (MQ=255)

                              cTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcg                                                                                                        <  2:1718109/140‑1 (MQ=255)

                              cTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcg                                                                                                        <  2:485229/140‑1 (MQ=255)

                              cTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcg                                                                                                        <  1:95233/140‑1 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc                                                                                                       <  2:214384/140‑1 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc                                                                                                       >  2:1184202/1‑140 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc                                                                                                       >  2:52776/1‑140 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc                                                                                                       <  1:1184202/140‑1 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc                                                                                                       >  2:546658/1‑140 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc                                                                                                       >  2:754278/1‑140 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATgcgc                                                                                                       >  1:606096/1‑140 (MQ=255)

                               tGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATAACGAGCGCGCCAGTGAGTTAATgcgc                                                                                                       >  2:1073027/1‑140 (MQ=255)

                                ggcggcGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGcc                                                                                                      <  1:52776/140‑1 (MQ=255)

                                ggcggcGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGcc                                                                                                      <  2:1719973/140‑1 (MQ=255)

                                 gcggcgCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTTACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCa                                                                                                     >  2:93205/1‑140 (MQ=255)

                                  cggcgCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAg                                                                                                    >  2:1703462/1‑140 (MQ=255)

                                       cgTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCAttt                                                                                               >  1:567347/1‑140 (MQ=255)

                                        gTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTa                                                                                              <  2:1257775/140‑1 (MQ=255)

                                            tCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGa                                                                                          <  1:1075922/140‑1 (MQ=255)

                                               aTTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGCGGTACCGCGCTCGGCAGGGAGTTAATGCGGCAGCATTTACTCACgg                                                                                       >  2:845548/1‑139 (MQ=255)

                                                tttATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGcc                                                                                      <  1:1276181/140‑1 (MQ=255)

                                                   aTCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAAt                                                                                   <  2:691648/140‑1 (MQ=255)

                                                   aTCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAAt                                                                                   <  1:1847990/140‑1 (MQ=255)

                                                        gCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCa                                                                              >  1:1611062/1‑140 (MQ=255)

                                                          tGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCAtt                                                                            >  2:870324/1‑140 (MQ=255)

                                                          tGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCAtt                                                                            >  1:1373858/1‑140 (MQ=255)

                                                          tGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCAtt                                                                            >  1:1830577/1‑140 (MQ=255)

                                                           gcggcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTa                                                                           >  1:776916/1‑140 (MQ=255)

                                                            cggcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTAt                                                                          >  1:430791/1‑140 (MQ=255)

                                                              gcgAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATcc                                                                        >  2:1944727/1‑140 (MQ=255)

                                                                gAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCcag                                                                      <  1:599642/140‑1 (MQ=255)

                                                                gAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCcag                                                                      <  1:1028533/140‑1 (MQ=255)

                                                                       gCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGa                                                               <  1:1681593/140‑1 (MQ=255)

                                                                           tCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggc                                                           >  2:1804514/1‑140 (MQ=255)

                                                                            cGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggct                                                          <  2:782332/140‑1 (MQ=255)

                                                                            cGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggct                                                          <  2:1830577/140‑1 (MQ=255)

                                                                            cGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggct                                                          <  2:1920043/140‑1 (MQ=255)

                                                                              gTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        <  1:754278/140‑1 (MQ=255)

                                                                              gTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        <  2:1441153/140‑1 (MQ=255)

                                                                              gTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        >  1:570297/1‑140 (MQ=255)

                                                                              gTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        <  2:567347/140‑1 (MQ=255)

                                                                              gTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        <  1:111602/140‑1 (MQ=255)

                                                                              gTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        <  2:824871/140‑1 (MQ=255)

                                                                                ggAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCa                                                      <  2:570297/140‑1 (MQ=255)

                                                                                ggAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCa                                                      <  1:546658/140‑1 (MQ=255)

                                                                                        tGGAGGATAAACACGATCAGCACCAGACCCTTACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAacta                                              <  1:93205/140‑1 (MQ=255)

                                                                                        tGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAacta                                              <  1:415045/140‑1 (MQ=255)

                                                                                            ggaTAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        <  2:1694654/126‑1 (MQ=255)

                                                                                            ggaTAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAtggctgg                                                        >  1:1694654/1‑126 (MQ=255)

                                                                                             gaTAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCtt                                         <  2:1853964/140‑1 (MQ=255)

                                                                                                aaaCACGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGACACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTTCg                                      >  2:940607/1‑140 (MQ=255)

                                                                                                  acacGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGa                                    <  2:1611062/140‑1 (MQ=255)

                                                                                                  acacGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGa                                    <  2:133426/140‑1 (MQ=255)

                                                                                                    acGATCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAAt                                  >  1:1887955/1‑140 (MQ=255)

                                                                                                       aTCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACg                               <  1:940607/140‑1 (MQ=255)

                                                                                                       aTCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACg                               >  2:1124526/1‑140 (MQ=255)

                                                                                                       aTCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACg                               >  1:566837/1‑140 (MQ=255)

                                                                                                       aTCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACg                               >  1:894758/1‑140 (MQ=255)

                                                                                                       aTCAGCACCAGACCCCGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTc                                        >  2:1137037/1‑131 (MQ=255)

                                                                                                       aTCAGCACCAGACCCCGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTc                                        <  1:1137037/131‑1 (MQ=255)

                                                                                                        tCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGc                              <  2:1156627/140‑1 (MQ=255)

                                                                                                        tCAGCACCAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGc                              <  2:606096/140‑1 (MQ=255)

                                                                                                               cAGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATATGCAACACtt                       >  1:63542/1‑140 (MQ=255)

                                                                                                                aGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAacac                         <  1:1163906/137‑1 (MQ=255)

                                                                                                                aGACCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAacac                         >  2:1163906/1‑137 (MQ=255)

                                                                                                                  aCCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGATGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGcc                    <  1:1513590/140‑1 (MQ=255)

                                                                                                                  aCCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGcc                    >  2:449240/1‑140 (MQ=255)

                                                                                                                  aCCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGcc                    >  2:756917/1‑140 (MQ=255)

                                                                                                                  aCCCTGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGcc                    >  1:1412824/1‑140 (MQ=255)

                                                                                                                      tGACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCgg                >  2:804748/1‑140 (MQ=255)

                                                                                                                       gACTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGa               <  1:804748/140‑1 (MQ=255)

                                                                                                                         ctgctgCGGTACTTCCGCCACCTACCCCGGGCCCCCATGGGTTTATGCCCCAACCTTTACTGAAGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATa             >  2:1607373/1‑140 (MQ=255)

                                                                                                                         cTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGAt              >  2:1938712/1‑139 (MQ=255)

                                                                                                                         cTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGAt              <  1:992954/139‑1 (MQ=255)

                                                                                                                         cTGCGGCGGTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGAt              <  1:1938712/139‑1 (MQ=255)

                                                                                                                            cggcggTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGccc                   <  1:285328/131‑1 (MQ=255)

                                                                                                                            cggcggTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGccc                   >  2:285328/1‑131 (MQ=255)

                                                                                                                            cggcggTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAAt          >  2:677528/1‑140 (MQ=255)

                                                                                                                            cggcggTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAAt          >  2:81801/1‑140 (MQ=255)

                                                                                                                            cggcggTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAAt          >  2:129500/1‑140 (MQ=255)

                                                                                                                             ggcggTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAAtt         >  1:818437/1‑140 (MQ=255)

                                                                                                                             ggcggTACTGCCGCGAGATACCGCGCCCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAAtt         >  1:771846/1‑140 (MQ=255)

                                                                                                                              gcggTACTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCCGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGAGGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAAttt        >  1:912860/1‑140 (MQ=255)

                                                                                                                                   aCTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAATTTTATcc   <  2:776916/140‑1 (MQ=255)

                                                                                                                                    cTGCCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAATTTTATCCg  <  1:756917/140‑1 (MQ=255)

TTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAACTACTCTTCCGGAATACGCAACACTTGCCCCGGATAAATTTTATCCG  >  NC_000913/2796112‑2796383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`