Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	580,890	T→C	I19I (ATT→ATC)	nohD →	DLP12 prophage; putative DNA‑packaging protein NohD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	580,890	0	T	C	100.0%	284.9 / NA	86	I19I (ATT→ATC)	nohD	DLP12 prophage; putative DNA‑packaging protein NohD
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (33/53);  total (33/53)

GAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCGG  >  NC_000913/580754‑581025                                                                                                                                         |                                                                                                                                        gaaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCAGTACCATCCAg                                                                                                                                      <  2:1188786/140‑1 (MQ=255)  aaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGa                                                                                                                                     >  2:8396/1‑140 (MQ=255)  aaagGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGa                                                                                                                                     >  2:1488043/1‑140 (MQ=255)    agGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAAc                                                                                                                                   >  1:279087/1‑140 (MQ=255)       aaaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTgg                                                                                                                                <  2:746820/140‑1 (MQ=255)       aaaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTgg                                                                                                                                >  1:369374/1‑140 (MQ=255)       aaaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTgg                                                                                                                                <  2:1418375/140‑1 (MQ=255)       aaaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTgg                                                                                                                                <  1:1424958/140‑1 (MQ=255)        aaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGc                                                                                                                               <  2:621364/140‑1 (MQ=255)        aaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGc                                                                                                                               <  1:8396/140‑1 (MQ=255)        aaCGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGc                                                                                                                               <  2:135563/140‑1 (MQ=255)             cAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGaa                                                                                                                          <  1:245895/140‑1 (MQ=255)             cAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGaa                                                                                                                          <  1:913717/140‑1 (MQ=255)             cAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGaa                                                                                                                          <  2:487104/140‑1 (MQ=255)                gTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGc                                                                                                                               >  2:1067781/1‑132 (MQ=255)                gTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGc                                                                                                                               <  1:1067781/132‑1 (MQ=255)                    tGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGaa                                                                                                                   >  1:1531404/1‑140 (MQ=255)                            aGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGtt                                                                                                           >  2:1447036/1‑140 (MQ=255)                            aGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGtt                                                                                                           >  2:1728550/1‑140 (MQ=255)                                      ccTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCg                                                                                                 <  1:467125/140‑1 (MQ=37)                                      ccTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCg                                                                                                 <  2:980198/140‑1 (MQ=37)                                      ccTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCg                                                                                                 <  1:1175014/140‑1 (MQ=37)                                      ccTCTGTCGTTTCCTTTCTCTGTTTTTGTCCATGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCg                                                                                                 <  1:490456/140‑1 (MQ=255)                                        tctGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGt                                                                                               >  2:663078/1‑140 (MQ=37)                                        tctGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGt                                                                                               >  2:1676482/1‑140 (MQ=255)                                         ctGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTg                                                                                              >  1:1218115/1‑140 (MQ=255)                                          tGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTgg                                                                                             <  2:808888/140‑1 (MQ=37)                                           gTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGc                                                                                            <  1:1889530/140‑1 (MQ=37)                                           gTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGc                                                                                            <  1:1534512/140‑1 (MQ=37)                                           gTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGc                                                                                            <  1:1898110/140‑1 (MQ=37)                                             cGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCaa                                                                                          <  2:1012596/140‑1 (MQ=37)                                                    tttCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCa                                                                                           <  1:1863636/132‑1 (MQ=37)                                                    tttCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCa                                                                                           >  2:1863636/1‑132 (MQ=255)                                                    tttCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAAt                                                                                   >  2:1131298/1‑140 (MQ=255)                                                    tttCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAAt                                                                                   >  1:1289314/1‑140 (MQ=255)                                                      tctcTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGa                                                                                 <  1:162215/140‑1 (MQ=37)                                                      tctcTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGa                                                                                 >  2:1756619/1‑140 (MQ=37)                                                       ctctGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAg                                                                                <  2:1764423/140‑1 (MQ=37)                                                        tctGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAgg                                                                               <  1:1131298/140‑1 (MQ=37)                                                        tctGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAgg                                                                               <  1:1488043/140‑1 (MQ=37)                                                        tctGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAgg                                                                               <  1:663078/140‑1 (MQ=37)                                                        tctGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAgg                                                                               <  1:1894352/140‑1 (MQ=37)                                                        tctGTTTTTGGCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAgg                                                                               <  2:1061680/140‑1 (MQ=17)                                                         ctGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGt                                                                              <  2:369374/140‑1 (MQ=37)                                                          tGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTg                                                                             <  2:1289314/140‑1 (MQ=37)                                                          tGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTg                                                                             <  2:576390/140‑1 (MQ=37)                                                                tGTCCGTGGAATGTGCAATGGAGGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTAt                                                                       <  1:961422/140‑1 (MQ=255)                                                                  tCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGa                                                                     <  1:1756619/140‑1 (MQ=25)                                                                   ccGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGAc                                                                    <  1:326961/140‑1 (MQ=21)                                                                      tGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGActct                                                                 >  2:436339/1‑140 (MQ=21)                                                                          aTGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTgccg                                                             <  2:1218115/140‑1 (MQ=18)                                                                           tgtgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTgccgc                                                            <  2:1409482/140‑1 (MQ=18)                                                                            gtgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTgccgcc                                                           <  1:678190/140‑1 (MQ=17)                                                                            gtgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTgccgcc                                                           >  2:36780/1‑140 (MQ=17)                                                                             tgCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGccgccg                                                          <  2:82610/140‑1 (MQ=14)                                                                                aaTGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCa                                                       >  1:1409550/1‑140 (MQ=14)                                                                                  tGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATa                                                     >  1:1617194/1‑140 (MQ=17)                                                                                  tGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATa                                                     >  1:1128054/1‑140 (MQ=17)                                                                                  tGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATa                                                     <  1:1409339/140‑1 (MQ=17)                                                                                   ggAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATaa                                                    >  1:1149666/1‑140 (MQ=17)                                                                                    gAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATaaa                                                   <  1:1673178/140‑1 (MQ=18)                                                                                       gTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATg                                                >  2:93879/1‑140 (MQ=21)                                                                                       gTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATg                                                >  1:432867/1‑140 (MQ=21)                                                                                       gTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATg                                                >  2:1088421/1‑140 (MQ=21)                                                                                          aacaaAAAGCAGCTGGCTGACATTTTCAGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTa                                             >  1:597982/1‑140 (MQ=19)                                                                                           acaaAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTAt                                            <  1:1728550/140‑1 (MQ=21)                                                                                              aaaaGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGcc                                         <  2:1531404/140‑1 (MQ=37)                                                                                                 agcagcTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGaa                                      <  1:1741390/140‑1 (MQ=37)                                                                                                 agcagcTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGaa                                      >  2:146225/1‑140 (MQ=21)                                                                                                 agcagcTGGCTGACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGaa                                      >  2:434697/1‑140 (MQ=21)                                                                                                        ggctgACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATg                               <  2:1871243/140‑1 (MQ=37)                                                                                                         gctgACATTTTCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGc                              >  2:1347467/1‑140 (MQ=21)                                                                                                           tcaCATTTTCGGTGAGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCAGTGGCAAGGGTAATGAGGTCCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTg                            <  2:140848/138‑1 (MQ=11)                                                                                                                  ttCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTga                     <  2:1617194/140‑1 (MQ=21)                                                                                                                   tCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGaa                                      >  1:1818474/1‑122 (MQ=25)                                                                                                                   tCGGTGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGCTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGaa                                      <  2:1818474/122‑1 (MQ=25)                                                                                                                       tGCGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCAGAAAGGGATGCTGAAATTGAGAACg                >  2:1033411/1‑140 (MQ=19)                                                                                                                         cGAGTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGaa              <  1:19875/140‑1 (MQ=37)                                                                                                                            gTATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAg           <  1:1347467/140‑1 (MQ=21)                                                                                                                             tATCCGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGc          <  1:434697/140‑1 (MQ=21)                                                                                                                                 cGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCt         >  1:1858684/1‑137 (MQ=21)                                                                                                                                 cGTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCt         <  2:1858684/137‑1 (MQ=21)                                                                                                                                  gTACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTgcgc     <  1:353071/140‑1 (MQ=21)                                                                                                                                   tACCATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGcc    <  1:1676482/140‑1 (MQ=21)                                                                                                                                     ccATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCgg  >  1:838149/1‑140 (MQ=21)                                                                                                                                     ccATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCgg  >  1:1245423/1‑140 (MQ=21)                                                                                                                                     ccATCCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCgg  <  1:167261/140‑1 (MQ=21)                                                                                                                                         |                                                                                                                                        GAAAGGAAACGACAGGTGCTGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGTGCAATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCGG  >  NC_000913/580754‑581025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑