| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1363275 = | 89 (0.680) | 4 (0.030) | 4/276 | 8.4 | 4.0% | coding (533/1488 nt) | puuC | gamma‑glutamyl‑gamma‑aminobutyraldehyde dehydrogenase |
| ? | NC_000913 | = 1364505 | 103 (0.790) | coding (274/1281 nt) | puuB | gamma‑glutamylputrescine oxidase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGATTTTTCAGACGGTTTTAGAATCACGCTGTTTCCCGCCGCCAGCGCCGGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1363330‑1363275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCCATGCCGTAGCTTTTTTCGATCACGTCGATGTCGCGGCTGTAGGAGTTCACAAGCTGTCCGCCATTGCGCCCGCTTGCGCCAAAGCCGATGCGTGAGGCTTCGAGAACCACTACGTCAAAGCCCGCTT < NC_000913/1364505‑1364374 TGATTTTTCAGACGGTTTTAGAATCACGCTGTTTCCCGCCGCCAGCGCCGGGCCGATGTCCATGCCGTAGCTTTTTTCGATCACGTCGATGTCGCGGCTGTAGGAGTTCACAAGCTGTCCGCCATTGCG > 1:1502881/1‑129TGATTTTTCAGACGGTTTTAGAATCACGCTGTTTCCCGCCGCCAGCGCCGGGCCGATGTCCATGCCGTAGCTTTTTTCGATCACGTCGATGTCGCGGCTGTAGGAGTTCACAAGCTGTCCGCCATTGCG < 2:1502881/129‑1 TTTCAGACGGTTTTAGAATCACGCTGTTTCCCGCCGCCAGCGCCGGGCCGATGTCCATGCCGTAGCTTTTTTCGATCACGTCGATGTCGCGGCTGTAGGAGTTCACAAGCTGTCCGCCATTGCGCCCGCTTGCGCCAAAG > 2:757596/1‑140 CGGGCCGATGTCCATGCCGTAGCTTTTTTCGATCACGTCGATGTCGCGGCTGTAGGAGTTCACAAGCTGTCCGCCATTGCGCCCGCTTGCGCCAAAGCCGATGCGTGAGGCTTCGAGAACCACTACGTCAAAGCCCGCTT < 1:757596/140‑1 TGATTTTTCAGACGGTTTTAGAATCACGCTGTTTCCCGCCGCCAGCGCCGGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1363330‑1363275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTCCATGCCGTAGCTTTTTTCGATCACGTCGATGTCGCGGCTGTAGGAGTTCACAAGCTGTCCGCCATTGCGCCCGCTTGCGCCAAAGCCGATGCGTGAGGCTTCGAGAACCACTACGTCAAAGCCCGCTT < NC_000913/1364505‑1364374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |