Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,568,5040TG28.9% 229.4 / 17.5 128T6P (ACC→CCC) mdtMmultidrug efflux pump/bile salt:H(+) antiporter/Na(+):H(+) antiporter/K(+):H(+) antiporter
Reads supporting (aligned to +/- strand):  ref base T (23/68);  new base G (37/0);  total (60/68)
Fisher's exact test for biased strand distribution p-value = 1.13e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 131 total aligned reads displayed.

CAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAAT  >  NC_000913/4568366‑4568639
                                                                                                                                          |                                                                                                                                          
   gggCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaa                                                                                                                                        >  2:672356/1‑140 (MQ=255)
   gggCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGaaaa                                                                                                                                        >  2:1108896/1‑140 (MQ=255)
     gCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaa                                                                                                                                      >  1:781013/1‑140 (MQ=255)
     gCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGaaaaaa                                                                                                                                      >  1:1154161/1‑140 (MQ=255)
         gACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGaaaaaaaagc                                                                                                                                  >  1:905186/1‑137 (MQ=255)
          aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTg                                                                                                                                 <  2:24965/140‑1 (MQ=255)
          aCTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGaaaaaaaagag                                                                                                                                 >  2:1835540/1‑136 (MQ=255)
            tGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGc                                                                                                                               <  1:242570/140‑1 (MQ=255)
              aCATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCAt                                                                                                                             <  2:227933/140‑1 (MQ=255)
               cATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATa                                                                                                                            <  2:1708582/140‑1 (MQ=255)
               cATCGGCATTAAAATCACGTACAACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATa                                                                                                                            <  1:207249/140‑1 (MQ=255)
                   ggCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATaacaa                                                                                                                        <  2:1792094/140‑1 (MQ=255)
                    gCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGGATaacaaa                                                                                                                       >  1:2071670/1‑140 (MQ=255)
                     cATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATaaaaaaa                                                                                                                      >  2:2125581/1‑139 (MQ=255)
                      aTTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaaa                                                                                                                                     <  1:1474010/124‑1 (MQ=255)
                      aTTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTaaaaaaa                                                                                                                                     >  2:1474010/1‑124 (MQ=255)
                           aaTCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGTATAACAAACAACTcc                                                                                                                <  2:2071372/140‑1 (MQ=255)
                               aCGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAATGGCATAACAAAAAACACCtttt                                                                                                            >  2:1997015/1‑138 (MQ=255)
                                cGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGAAAAAAAAAAACTCCTTT‑Tc                                                                                                          >  2:1320314/1‑140 (MQ=255)
                                       caTTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑aa                                                                                                  <  2:1671374/140‑1 (MQ=255)
                                         ttAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAAAAAACAACTCCTTG‑TCCCGGG‑AA‑cc                                                                                               >  2:1927003/1‑140 (MQ=255)
                                             tGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAATGGGATAAAAAAAAAAACCTTG‑TCCGGAG‑AA‑CCCCaa                                                                                           >  2:1819314/1‑140 (MQ=255)
                                               aTCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACg                                                                                         >  1:1778968/1‑140 (MQ=255)
                                                tCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATAAAAAAAAACTCCTTG‑TCCGGAG‑AA‑CCCCAACgg                                                                                        >  1:1994056/1‑140 (MQ=255)
                                                 cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCCTAAAAAAAAACTCCCTT‑TCCCGAG‑AA‑ACCCCAAggg                                                                                       >  2:928062/1‑140 (MQ=255)
                                                 cccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAACTCCTTG‑TCCGGGG‑GA‑CCCCCACggg                                                                                       >  2:1603531/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACgggg                                                                                      >  1:728282/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACATGGCATAACAAAAAACACCCTG‑TCCGGAG‑AA‑CCCCCACaggg                                                                                      >  2:329312/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAACTCCTTG‑TCCGGAG‑AA‑CCCCAACgggg                                                                                      >  1:140493/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATAACAAAAAAATCCTTT‑TCCGGAG‑AACCCCCAACggg                                                                                       >  2:482745/1‑140 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAA‑GGGGGATAAAAAAAAAATCCTTT‑TCCGGGG‑AA‑ACCCAACcgggg                                                                                     >  2:2019656/1‑139 (MQ=255)
                                                  ccAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAA‑GAGGGATAAAAAACAAATCCCTT‑TCCGGAG‑AA‑ACCCCACggggg                                                                                     >  2:1506016/1‑139 (MQ=255)
                                                      gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGaaaa                                                                                  >  1:1117862/1‑140 (MQ=255)
                                                      gCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAAAGGCCGAAAAAAAAACACCTTT‑TCCGGAG‑AA‑CCCCCACCGGGgaaa                                                                                  >  2:1244868/1‑140 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  2:320337/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  2:781013/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  2:1117862/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  1:672356/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  1:1320314/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  1:1745300/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  1:1819314/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  1:1835540/140‑1 (MQ=255)
                                                        tGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  1:348999/140‑1 (MQ=255)
                                                        gggATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACg                                                                                <  1:1837992/139‑1 (MQ=255)
                                                          gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGaa                                                                              >  1:1792355/1‑140 (MQ=255)
                                                          gATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAATGGCATAAAAAACAAATCCTTG‑TCCGGAG‑AA‑CCCCCACGGGGGAAAAGaa                                                                              >  2:86506/1‑140 (MQ=255)
                                                           aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGCATAAAAAAAAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGGAAACGaaa                                                                             >  1:1714515/1‑140 (MQ=255)
                                                           aTCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAACTGGCATTACCAAAAACACCCTGTTCCGGGG‑AA‑CCCCAAAGGGG‑AAACGaaa                                                                             >  2:1214045/1‑140 (MQ=255)
                                                               gATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCa                                                                         <  1:2070133/140‑1 (MQ=255)
                                                                aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAAAAAATCCTTG‑TCCGGAG‑AA‑ACCCAACGGGGGAAAAGaaaattaa                                                                        >  1:959435/1‑135 (MQ=255)
                                                                aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAACTGGCATAACAAACAAACCCTTT‑TCCGGAA‑AA‑ACCCCACGGGGGAAAAGAAAATCaa                                                                        >  1:489199/1‑140 (MQ=255)
                                                                aTCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGAGGCATAAAAAACAACTCCTTG‑TCCGGGG‑AA‑CCCCAACGGGGGAAAAGAAAATCaa                                                                        >  2:1757367/1‑140 (MQ=255)
                                                                  ccGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATa                                                                      >  1:851945/1‑140 (MQ=255)
                                                                  ccGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATa                                                                      <  1:928062/140‑1 (MQ=255)
                                                                    gTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGGGGCATAAAAAAAAAATCCCTG‑TCCGGAG‑AA‑CCCCCACGGGGAAAAAGAAAATCAAAAcc                                                                    >  2:1837992/1‑140 (MQ=255)
                                                                     tCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGGGGCATAACAAAAAAATCCTTT‑TCCGGAG‑AA‑CCCCAACGGGGGAAAAGAAAATCAAAAccc                                                                   >  2:2039063/1‑139 (MQ=255)
                                                                           gATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTa                                                             <  2:851945/140‑1 (MQ=255)
                                                                            aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTaa                                                            <  2:938710/140‑1 (MQ=255)
                                                                            aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGGGGCATAAAAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCCACGGGGGAAAAGAAAATCAAAACCGCCGGTaa                                                            >  2:1298742/1‑140 (MQ=255)
                                                                            aTACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAAATCCTTT‑TCCGGAGAAA‑CCCCAACGGGGAAAA‑GAAAATTAAAACCCGCGGTaa                                                            >  2:1038846/1‑140 (MQ=255)
                                                                                   gcaAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGGATAAAAAAAAACTCCTTT‑TCCGGAG‑AA‑ACCCAACGGGGGAAACGAAAATCAATACCCTCGGGAATGACGaa                                                     >  2:853645/1‑140 (MQ=255)
                                                                                    caAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGaaa                                                    <  2:1726653/140‑1 (MQ=255)
                                                                                      aaGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAgg                                                  <  1:1966806/140‑1 (MQ=255)
                                                                                            tACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACGTGGCATAAAAAAAAACTCATTG‑TCCGGGG‑AA‑ACCCAACGGGGGAAACGAAAATCAAAAACGTCGGGAATGACGAAAAGCAgggg                                            >  2:1127693/1‑138 (MQ=255)
                                                                                              cAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgag                                          <  2:1399367/140‑1 (MQ=255)
                                                                                               aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                         <  1:1214045/140‑1 (MQ=255)
                                                                                               aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                         <  1:482745/140‑1 (MQ=255)
                                                                                               aaaaTCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCATTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTgaga                                         <  1:1127693/140‑1 (MQ=255)
                                                                                                   tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAggg                                     >  1:1807733/1‑140 (MQ=255)
                                                                                                   tCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAAAAAACCCTTG‑TCCGGAG‑AA‑ACCCAACGGGGGAAAAGAAAATCAAAAACGTCGGGAATGAAGAAAAGCAGGGGAGAAggg                                     >  2:131492/1‑140 (MQ=255)
                                                                                                     aaCGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAACCAGGCATAAAAAACAAACCCTTG‑TCCGGGG‑AA‑CCCCAAAGGGGAAAAACAAAATCAAAACCGTCGGGGATGACGCAAAGCAGGGGGGAAGGGcc                                   >  2:480238/1‑139 (MQ=255)
                                                                                                       cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAAc                                 <  1:2097348/140‑1 (MQ=255)
                                                                                                       cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAACAAAAAAATCCCTT‑TCCGGGG‑AA‑ACCCAACGGGGGAAAAGAAAATCAAAAACGTCGGGAAAGACGAAAAGGAGGggggaaggggaaa                                 >  2:410174/1‑139 (MQ=255)
                                                                                                       cGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGGAAAAAAAAGTGGCATAAAAAACAAATCCTTG‑TCCGGAG‑AA‑ACCCAACGGGGGAAAAGAAAATCAATACCGTCGGGAATGACGAAAGGCAGGGGAGAAAGGGaaa                                 >  2:69981/1‑139 (MQ=255)
                                                                                                         ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga                               <  2:905186/140‑1 (MQ=255)
                                                                                                         ccATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACga                               <  2:1031153/140‑1 (MQ=255)
                                                                                                           aTCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAACAACTCCTTG‑TCCGGAGAAA‑CCCCAAGGGGGAAAA‑GAAAATCAAAAACCTCGGGAAAGAAGAAAAGCAGGGGAGAAAGGGAAAgaga                             >  2:433445/1‑140 (MQ=255)
                                                                                                            tCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGAc                            <  1:1298742/140‑1 (MQ=255)
                                                                                                            tCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGAc                            <  2:1994056/140‑1 (MQ=255)
                                                                                                            tCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGAc                            <  2:471448/140‑1 (MQ=255)
                                                                                                                   aaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAAt                     <  1:1108896/140‑1 (MQ=255)
                                                                                                                   aaaCAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAAt                     <  1:931994/140‑1 (MQ=255)
                                                                                                                      cAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTa                  <  2:192881/140‑1 (MQ=255)
                                                                                                                      cAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTa                  <  2:1187624/140‑1 (MQ=255)
                                                                                                                       aGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTAc                 <  1:1421376/140‑1 (MQ=255)
                                                                                                                       aGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTAc                 <  2:772307/140‑1 (MQ=255)
                                                                                                                         cGTGGCGGCATGGCGGGTAAAAAAAAGTGGCATAACAAAAAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAAATCAATACCGCCGGGAATGACGAAAAGCAGGGGGGAAGGGCAACGAGACTGCAAAAGTACTg               >  2:616174/1‑140 (MQ=255)
                                                                                                                            ggcggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAAt            <  2:1778968/140‑1 (MQ=255)
                                                                                                                               ggcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTc         <  1:460688/140‑1 (MQ=255)
                                                                                                                               ggcATGGCGGGT‑AAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCa        <  1:2019656/140‑1 (MQ=255)
                                                                                                                                gcATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCa        <  1:2039063/140‑1 (MQ=255)
                                                                                                                                  aTGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATg      <  1:845927/140‑1 (MQ=255)
                                                                                                                                  aTGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATg      <  2:1012915/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa    <  1:616174/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa    <  2:728282/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa    <  1:1544041/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa    <  1:1881666/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa    <  1:480238/140‑1 (MQ=255)
                                                                                                                                    ggCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTa    <  1:524092/140‑1 (MQ=255)
                                                                                                                                      cGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAAt  <  1:1927003/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                          
CAGGGGCCAGACTGACATCGGCATTAAAATCACGTACCACATTAATGATCCCAGGCTGGATCAGATCCGTCGACAGATACGCAGCAAAGTCATACAAAATCAACGCCATCGGGAAAAACAGCGTGGCGGCATGGCGGGTAAAAAAACGTGGCATAACAAACAACTCCTTG‑TCCGGAG‑AA‑CCCCAACGGGGAAAACGAAATTCAATACCGTCGGTAATGACGAAAGGCAGGTGAGAAGGGCAACGAGACTGCAAATGTACTGAATTTCATGTAAT  >  NC_000913/4568366‑4568639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑