BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	947,685	C→A	L153M (CTG→ATG)	ycaM →	putative transporter YcaM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	947,685	0	C	A	100.0%	391.9 / NA	110	L153M (CTG→ATG)	ycaM	putative transporter YcaM
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (52/58); total (52/58)

Only 100 of 112 total aligned reads displayed.

AATTCTGATTGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGCTGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCATTCC  >  NC_000913/947549‑947821

aaTTCTGATTGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGa                                                                                                                                       <  1:666839/140‑1 (MQ=255)

   tCTGATTGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGaaaa                                                                                                                                    >  1:1398809/1‑140 (MQ=255)

   tCTGATTGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGaaaa                                                                                                                                    >  2:1051266/1‑140 (MQ=255)

        ttGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAAtcgtc                                                                                                                               >  1:1171778/1‑140 (MQ=255)

            gcTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGtt                                                                                                                           >  2:1330897/1‑140 (MQ=255)

                   tGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGc                                                                                                                    <  1:690184/140‑1 (MQ=255)

                   tGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGc                                                                                                                    <  1:1376691/140‑1 (MQ=255)

                   tGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGc                                                                                                                    <  2:263237/140‑1 (MQ=255)

                   tGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGc                                                                                                                    <  1:1157904/140‑1 (MQ=255)

                    gggCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCa                                                                                                                   <  2:1317397/140‑1 (MQ=255)

                     ggCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAg                                                                                                                  <  2:881274/140‑1 (MQ=255)

                         aTGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGAt                                                                                                              <  1:162305/140‑1 (MQ=255)

                         aTGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGAt                                                                                                              <  2:677223/140‑1 (MQ=255)

                         aTGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGAt                                                                                                              <  2:1206213/140‑1 (MQ=255)

                            aaaGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGc                                                                                                           <  2:901053/140‑1 (MQ=255)

                             aaGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCt                                                                                                          <  1:1051266/140‑1 (MQ=255)

                               ggCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTAt                                                                                                        <  1:799814/140‑1 (MQ=255)

                                gCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTAtg                                                                                                       >  2:263010/1‑140 (MQ=255)

                                 cGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTAtgt                                                                                                      <  1:750934/140‑1 (MQ=255)

                                    cGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGa                                                                                                               <  1:286471/128‑1 (MQ=255)

                                    cGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGa                                                                                                               >  2:286471/1‑128 (MQ=255)

                                    cGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTAtgtttg                                                                                                   >  1:847877/1‑140 (MQ=255)

                                     ggTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTAtgtttgt                                                                                                  <  1:1319946/140‑1 (MQ=255)

                                         cGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGTGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATg                                                                                              >  1:497432/1‑140 (MQ=255)

                                         cGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATg                                                                                              >  2:930824/1‑140 (MQ=255)

                                          gCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGt                                                                                             <  2:1327014/140‑1 (MQ=255)

                                          gCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGt                                                                                             <  1:1125667/140‑1 (MQ=255)

                                            tAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCa                                                                                           <  1:704204/140‑1 (MQ=255)

                                            tAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCa                                                                                           <  1:529168/140‑1 (MQ=255)

                                                 aaaGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCt                                                                                      <  1:1102759/140‑1 (MQ=255)

                                                 aaaGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCt                                                                                      <  1:930824/140‑1 (MQ=255)

                                                       tatTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTAtgt                                                                                <  1:1386647/140‑1 (MQ=255)

                                                        atTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTAtgtg                                                                               >  1:725960/1‑140 (MQ=255)

                                                          tCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGc                                                                             >  1:1123103/1‑140 (MQ=255)

                                                           cAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCg                                                                            <  2:104663/140‑1 (MQ=255)

                                                                 tAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCg                                                                      >  1:444374/1‑140 (MQ=255)

                                                                 tAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCg                                                                      >  1:1377109/1‑140 (MQ=255)

                                                                        aCAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAAccc                                                               >  1:1359735/1‑139 (MQ=255)

                                                                        aCAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACcg                                                               >  2:1191484/1‑140 (MQ=255)

                                                                        aCAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACcg                                                               >  2:69387/1‑140 (MQ=255)

                                                                            gggTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGcc                                                           >  2:532090/1‑140 (MQ=255)

                                                                            gggTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGcc                                                           >  1:514650/1‑140 (MQ=255)

                                                                             ggTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCt                                                          <  2:514650/140‑1 (MQ=255)

                                                                             ggTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCt                                                          <  2:725960/140‑1 (MQ=255)

                                                                             ggTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCt                                                          <  1:1191484/140‑1 (MQ=255)

                                                                              gTTAACGCTGTTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGTATGATCTGATTGTTATGCTACTACTGTATTTGGCGATGGCGGTAACCGCGTCTg                                                         >  2:919457/1‑140 (MQ=255)

                                                                              gTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTg                                                         >  2:914639/1‑140 (MQ=255)

                                                                               ttAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGc                                                        >  2:291/1‑140 (MQ=255)

                                                                               ttAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGc                                                        >  1:14441/1‑140 (MQ=255)

                                                                                tAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCa                                                       >  1:1298007/1‑140 (MQ=255)

                                                                                 aaCGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACcgcg                                                             <  2:197322/133‑1 (MQ=255)

                                                                                 aaCGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACcgcg                                                             >  1:197322/1‑133 (MQ=255)

                                                                                 aaCGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCaa                                                      >  1:1327786/1‑140 (MQ=255)

                                                                                 aaCGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCaa                                                      >  1:888554/1‑140 (MQ=255)

                                                                                 aaCGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCaa                                                      >  1:71859/1‑140 (MQ=255)

                                                                                    gCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   <  1:69387/140‑1 (MQ=255)

                                                                                    gCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   <  1:1101680/140‑1 (MQ=255)

                                                                                    gCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   <  2:1398809/140‑1 (MQ=255)

                                                                                    gCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   <  2:1327786/140‑1 (MQ=255)

                                                                                      tGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACt                                                 <  2:1122178/140‑1 (MQ=255)

                                                                                      tGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACt                                                 <  1:532090/140‑1 (MQ=255)

                                                                                       ggTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   >  2:191872/1‑137 (MQ=255)

                                                                                       ggTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   <  1:191872/137‑1 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATTGCGGTAACCGGGCCTGCAATTACTGa                                               >  1:960939/1‑140 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGcc                                                           >  1:1013844/1‑128 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGcc                                                           <  2:1013844/128‑1 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGc                                                        >  1:290564/1‑131 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   <  1:522028/136‑1 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTa                                                   >  2:522028/1‑136 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGa                                               >  1:1261372/1‑140 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGa                                               >  2:863584/1‑140 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGa                                               <  2:617379/140‑1 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGa                                               >  2:1154218/1‑140 (MQ=255)

                                                                                        gTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGa                                               <  2:1377109/140‑1 (MQ=255)

                                                                                         tGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGaa                                              <  2:766271/140‑1 (MQ=255)

                                                                                                tATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCata                                       >  1:1337625/1‑140 (MQ=255)

                                                                                                  tcttctTTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATAtt                                     >  1:672839/1‑140 (MQ=255)

                                                                                                    ttcttTATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGc                                   <  2:672839/140‑1 (MQ=255)

                                                                                                       tttATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGAc                                <  2:1261372/140‑1 (MQ=255)

                                                                                                        ttATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGAcc                               >  2:925656/1‑140 (MQ=255)

                                                                                                        ttATGTGGGTTGCTTCACCCGGTATGAAATCGATGAAAATCGTCGCTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGAcc                               <  2:1328765/140‑1 (MQ=255)

                                                                                                         tATGTGGGTTGCTTCACGTGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACca                              <  2:497432/140‑1 (MQ=255)

                                                                                                         tATGTGGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACca                              <  1:1336339/140‑1 (MQ=255)

                                                                                                           tgtgGGTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACcaca                            <  2:1298007/140‑1 (MQ=255)

                                                                                                              gggTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCTCTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCGCAAAc                         <  2:710547/140‑1 (MQ=255)

                                                                                                                gTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACca                              >  2:347482/1‑133 (MQ=255)

                                                                                                                gTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACca                              <  1:347482/133‑1 (MQ=255)

                                                                                                                gTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACAt                       >  1:1259609/1‑140 (MQ=255)

                                                                                                                gTTGCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACAt                       >  2:796987/1‑140 (MQ=255)

                                                                                                                   gCTTCACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTAc                    >  1:968995/1‑140 (MQ=255)

                                                                                                                       cACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACcac                             >  2:811120/1‑127 (MQ=255)

                                                                                                                       cACGCGGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACcac                             <  1:811120/127‑1 (MQ=255)

                                                                                                                         cgcgGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGa              >  2:895503/1‑140 (MQ=255)

                                                                                                                         cgcgGTATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGa              <  2:444374/140‑1 (MQ=255)

                                                                                                                          gcgGTATGAAATCGATGAAAATCTTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGaa             <  1:919457/140‑1 (MQ=255)

                                                                                                                              tATGAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGt         >  2:36874/1‑140 (MQ=255)

                                                                                                                                 gAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCa      <  1:895503/140‑1 (MQ=255)

                                                                                                                                 gAAATCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCa      <  2:1359735/140‑1 (MQ=255)

                                                                                                                                  aaaTCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCAt     <  2:1171778/140‑1 (MQ=255)

                                                                                                                                     tCGATGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCATGcc  <  2:1259609/140‑1 (MQ=255)

AATTCTGATTGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGCTGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCATTCC  >  NC_000913/947549‑947821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`