| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 3,495,041 | (CCTGGCGCACG)1→2 | coding (1031/2544 nt) | nirB → | nitrite reductase catalytic subunit NirB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3495024 | 0 (0.000) | 35 (0.680) +CGCACGCCTGG |
25/220 | 0.6 | 100% | coding (1014/2544 nt) | nirB | nitrite reductase catalytic subunit NirB |
| ? | NC_000913 | 3495025 = | 0 (0.000) | coding (1015/2544 nt) | nirB | nitrite reductase catalytic subunit NirB | |||||
GGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3494886‑3495024‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGCGACTACGGTAACCTGCTGC > NC_000913/3495025‑3495163 ||||||||||| GGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTC > 1:10954/1‑140 CACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGATACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCTCACG > 2:784735/1‑140 ACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGC > 1:901402/1‑140 CCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCC < 1:157206/140‑1 CCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCC < 2:10954/140‑1 GGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGG > 2:704736/1‑140 CGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCG > 1:124008/1‑129 CGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCG < 2:124008/129‑1 CAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCA > 1:252478/1‑140 CAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCA < 2:100074/140‑1 TCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTA < 2:282990/140‑1 ACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTT > 1:595783/1‑140 TCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGA < 2:901402/140‑1 CGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAA > 1:123441/1‑140 CGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCCGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAA > 1:408280/1‑140 AAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGA < 2:123441/140‑1 GGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGC < 2:595783/140‑1 TGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGA < 2:894576/125‑1 TGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGA > 1:894576/1‑125 TGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCCGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCT < 2:408280/140‑1 CTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGA < 1:633178/140‑1 CTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGA > 2:38326/1‑140 AGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGC > 1:508406/1‑140 AGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGC > 2:484811/1‑140 AGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGC > 1:873009/1‑140 AAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAA > 1:255189/1‑140 AACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAA < 2:255189/140‑1 CTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTG > 2:159328/1‑140 CTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTG > 2:25108/1‑140 GGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCT < 1:38326/140‑1 GGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCT < 1:866437/140‑1 GGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCT < 2:873009/140‑1 ACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGG > 2:245053/1‑140 GGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTG < 1:670611/140‑1 GGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTG > 1:179045/1‑140 TTGGTGATGCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCG < 1:288886/140‑1 TTGGTGATGCGCACGGTCGCACGCCTGGAGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCG > 2:639763/1‑140 GCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGC > 1:533967/1‑140 GCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGC > 1:332737/1‑140 GCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGC > 1:718703/1‑140 GCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGC < 1:25108/140‑1 GCGCACGGTCGCACGCCTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGC > 1:650374/1‑140 CTGGCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGCGACTACGGTAACCTGC > 2:266544/1‑140 GCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGCGACTACGGTAACCTGCTGC < 2:252478/140‑1 GCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGCGACTACGGTAACCTGCTGC < 1:704736/140‑1 ||||||||||| GGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3494886‑3495024‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGCGACTACGGTAACCTGCTGC > NC_000913/3495025‑3495163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |