Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,913,547	C→T	G424S (GGC→AGC)	prc ←	tail‑specific protease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,913,547	0	C	T	100.0%	283.5 / NA	79	G424S (GGC→AGC)	prc	tail‑specific protease
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (38/41);  total (38/41)

GCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTC  >  NC_000913/1913415‑1913683                                                                                                                                     |                                                                                                                                         gcgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTa                                                                                                                                   >  2:132428/1‑140 (MQ=255)  cgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTAt                                                                                                                                  >  1:977399/1‑140 (MQ=255)  cgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTAt                                                                                                                                  >  1:1706899/1‑140 (MQ=255)  cgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTAt                                                                                                                                  >  1:1457136/1‑140 (MQ=255)    cACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  2:1181012/140‑1 (MQ=255)    cACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  1:996639/140‑1 (MQ=255)    cACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  1:132428/140‑1 (MQ=255)    cACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  1:1790997/140‑1 (MQ=255)    cACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  1:1426876/140‑1 (MQ=255)    cACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  2:216093/140‑1 (MQ=255)    cACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  2:344057/140‑1 (MQ=255)         ccGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGAc                                                                                                                           >  1:904004/1‑140 (MQ=255)         ccGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGAc                                                                                                                           <  1:1707472/140‑1 (MQ=255)            tAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGTGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTg                                                                                                                        <  2:1723067/140‑1 (MQ=255)            tAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTg                                                                                                                        >  1:1734370/1‑140 (MQ=255)                 cTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  2:141116/127‑1 (MQ=255)                 cTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                >  1:141116/1‑127 (MQ=255)                   gCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                <  2:1003490/125‑1 (MQ=255)                   gCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATcg                                                                                                                                >  1:1003490/1‑125 (MQ=255)                   gCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATg                                                                                                                 >  2:1505956/1‑140 (MQ=255)                   gCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATg                                                                                                                 >  2:286486/1‑140 (MQ=255)                    cATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATgg                                                                                                                >  2:861974/1‑140 (MQ=255)                     aTTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATggg                                                                                                               >  1:1575396/1‑140 (MQ=255)                     aTTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATggg                                                                                                               <  2:1259574/140‑1 (MQ=255)                      ttGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGa                                                                                                              <  1:388739/140‑1 (MQ=255)                       tGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGAc                                                                                                             >  2:651375/1‑140 (MQ=255)                         ccGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGAccc                                                                                                           >  1:1033963/1‑140 (MQ=255)                         ccGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGAccc                                                                                                           >  2:1001182/1‑140 (MQ=255)                         ccGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGAccc                                                                                                           >  1:694530/1‑140 (MQ=255)                          cgcgGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCg                                                                                                          <  1:211698/140‑1 (MQ=255)                          cgcgGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCg                                                                                                          <  2:706520/140‑1 (MQ=255)                          cgcgGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCg                                                                                                          <  2:884304/140‑1 (MQ=255)                          cgcgGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCg                                                                                                          <  2:148818/140‑1 (MQ=255)                              gCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAgg                                                                                                      >  1:560271/1‑140 (MQ=255)                                     tttCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAAc                                                                                               <  1:1001182/140‑1 (MQ=255)                                      ttCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACa                                                                                              <  1:1505956/140‑1 (MQ=255)                                        cTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGa                                                                                            <  2:1734370/140‑1 (MQ=255)                                         tGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGAc                                                                                           <  1:1072092/140‑1 (MQ=255)                                           aaGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCGGGAATAAACAGACCg                                                                                         <  2:694530/140‑1 (MQ=255)                                           aaGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCg                                                                                         <  1:563424/140‑1 (MQ=255)                                            aGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCgg                                                                                        <  1:537119/140‑1 (MQ=255)                                                  aGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCg                                                                                  >  2:552323/1‑140 (MQ=255)                                                     aCTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATa                                                                               <  1:861974/140‑1 (MQ=255)                                                           gCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCtt                                                                         <  2:1575396/140‑1 (MQ=255)                                                              gTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAg                                                                      >  1:1011155/1‑140 (MQ=255)                                                                    cAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACg                                                                >  2:1300481/1‑140 (MQ=255)                                                                          caccaGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCAc                                                          <  1:1300481/140‑1 (MQ=255)                                                                            ccaGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCg                                                        >  1:177832/1‑140 (MQ=255)                                                                            ccaGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCg                                                        >  1:1005500/1‑140 (MQ=255)                                                                             caGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGATCCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGGTTCAGTTAACGCCCCACCGc                                                       <  2:1624809/140‑1 (MQ=255)                                                                             caGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                       >  2:1356679/1‑140 (MQ=255)                                                                                    ccTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTTAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAAc                                                                 >  2:849372/1‑123 (MQ=255)                                                                                    ccTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTTAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAAc                                                                 <  1:849372/123‑1 (MQ=255)                                                                                       ttATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACg                                             <  2:1005500/140‑1 (MQ=255)                                                                                       ttATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACg                                             >  1:597752/1‑140 (MQ=255)                                                                                       ttATAGAAAACCTGTCCGGGGGTATCGCTATCTCCACGACCCTTGCTGTTGTTATCGCGAACCTGAACAATGGGTCCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTCCAGTTAACGCCCCACCGCCATTGCTACg                                             <  2:310605/140‑1 (MQ=255)                                                                                        tataGGAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                       >  2:376479/1‑129 (MQ=255)                                                                                        tataGGAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                       <  1:376479/129‑1 (MQ=255)                                                                                           aGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAgg                                         <  2:1033963/140‑1 (MQ=255)                                                                                            gAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGt                                        <  2:1011155/140‑1 (MQ=255)                                                                                            gAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGt                                        <  1:286486/140‑1 (MQ=255)                                                                                            aaaacCCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGt                                        <  2:1444537/139‑1 (MQ=255)                                                                                               aaCCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCga                                     >  1:1332772/1‑140 (MQ=255)                                                                                               aaCCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCga                                     >  2:763991/1‑140 (MQ=255)                                                                                                 ccTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCgatg                                   >  1:1339530/1‑140 (MQ=255)                                                                                                    gTCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGatgatg                                >  1:1066832/1‑140 (MQ=255)                                                                                                     tCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGAtgatga                               >  1:64689/1‑140 (MQ=255)                                                                                                     tCCGTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGAtgatga                               >  1:1826818/1‑140 (MQ=255)                                                                                                        gTCGGTATCGCTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACgc                            <  2:977399/140‑1 (MQ=255)                                                                                                                  cTATCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACAtt                  >  1:1264599/1‑140 (MQ=255)                                                                                                                     tCTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTg               <  2:1457136/140‑1 (MQ=255)                                                                                                                      cTTCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGt              >  1:129173/1‑140 (MQ=255)                                                                                                                       ttCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGAtgatga                               <  2:1332381/122‑1 (MQ=255)                                                                                                                       ttCACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGAtgatga                               >  1:1332381/1‑122 (MQ=255)                                                                                                                         cACGAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGtttt           >  2:1013763/1‑140 (MQ=255)                                                                                                                            gAACCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATACTGTTTTTcc        >  2:659050/1‑140 (MQ=255)                                                                                                                             aaCCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCa       <  2:64689/140‑1 (MQ=255)                                                                                                                             aaCCTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCa       <  1:552323/140‑1 (MQ=255)                                                                                                                               ccTTGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGt     >  1:762177/1‑140 (MQ=255)                                                                                                                                  tGCTGTTGTTATCGGGGACTTGAACAATGGGACCCGCAGGAATAAACAGCCCGGAGAGCGATACGGCTTCAGTTAACCCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTc  <  2:129173/140‑1 (MQ=255)                                                                                                                                  tGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGttttt          <  1:391352/132‑1 (MQ=255)                                                                                                                                  tGCTGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTc  <  2:1339530/140‑1 (MQ=255)                                                                                                                                     |                                                                                                                                         GCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTC  >  NC_000913/1913415‑1913683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑