BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,474,560	C→T	intergenic (‑8/+118)	rpsL ← / ← tusB	30S ribosomal subunit protein S12/sulfurtransferase complex subunit TusB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,474,560	0	C	T	100.0%	596.6 / NA	166	intergenic (‑8/+118)	rpsL/tusB	30S ribosomal subunit protein S12/sulfurtransferase complex subunit TusB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (77/89); total (77/89)

Only 100 of 166 total aligned reads displayed.

TTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCACCAGGCCATCTGGCTG  >  NC_000913/3474424‑3474696

tttAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTcc                                                                                                                                       >  2:1710112/1‑140 (MQ=255)

            agtaTATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCtt                                                                                                                           <  2:1446172/140‑1 (MQ=255)

                tataCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGc                                                                                                                       >  2:1196723/1‑140 (MQ=255)

                tataCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGc                                                                                                                       <  2:1358951/140‑1 (MQ=255)

                 ataCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCt                                                                                                                      <  2:950389/140‑1 (MQ=255)

                  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCtt                                                                                                                     >  1:989007/1‑140 (MQ=255)

                  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCtt                                                                                                                     >  2:749329/1‑140 (MQ=255)

                  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCtt                                                                                                                     >  1:619173/1‑140 (MQ=255)

                  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCtt                                                                                                                     >  1:501894/1‑140 (MQ=255)

                  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTG‑‑GCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCg                                                                                                                   >  1:695985/1‑140 (MQ=255)

                  taCACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCCTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCtt                                                                                                                     <  1:118916/140‑1 (MQ=255)

                   acacGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTc                                                                                                                    >  2:801393/1‑140 (MQ=255)

                    cacGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCg                                                                                                                   >  1:309732/1‑140 (MQ=255)

                     acGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGttt                                                                                                                                 <  2:560695/125‑1 (MQ=255)

                     acGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGt                                                                                                                  >  2:108668/1‑140 (MQ=255)

                     acGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGt                                                                                                                  >  1:372476/1‑140 (MQ=255)

                     acGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGt                                                                                                                  >  1:1647141/1‑140 (MQ=255)

                     acGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGt                                                                                                                  >  1:1582840/1‑140 (MQ=255)

                      cGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTa                                                                                                                 <  2:677785/140‑1 (MQ=255)

                       gAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaa                                                                                                                >  1:435913/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  1:1285189/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  2:1028502/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  2:1798378/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  2:451864/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  1:1119729/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  2:1524672/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  2:818721/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  2:1540408/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  2:16514/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               <  1:947672/140‑1 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  1:405565/1‑140 (MQ=255)

                        aGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTACTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               >  1:1671702/1‑140 (MQ=255)

                          tACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGc                                                                                                                       >  1:28997/1‑130 (MQ=255)

                            cATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACg                                                                                                           <  1:818721/140‑1 (MQ=255)

                            cATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACg                                                                                                           >  2:1139358/1‑140 (MQ=255)

                            cATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACg                                                                                                           >  2:1648631/1‑140 (MQ=255)

                            cATACGCCACATTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACg                                                                                                           >  2:1728822/1‑140 (MQ=255)

                             aTACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGt                                                                                                          <  2:619929/140‑1 (MQ=255)

                               aCGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGtaa                                                                                                        >  2:554646/1‑140 (MQ=255)

                                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTa                                                                                                                 >  2:24380/1‑127 (MQ=255)

                                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTa                                                                                                                 <  1:24380/127‑1 (MQ=255)

                                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaa                                                                                                    >  1:1717330/1‑140 (MQ=255)

                                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaa                                                                                                    >  2:705940/1‑140 (MQ=255)

                                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaa                                                                                                    >  2:505800/1‑140 (MQ=255)

                                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaa                                                                                                    >  1:453002/1‑140 (MQ=255)

                                   cACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaa                                                                                                    >  2:661794/1‑140 (MQ=255)

                                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaaa                                                                                                   <  2:309732/140‑1 (MQ=255)

                                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaaa                                                                                                   <  2:619173/140‑1 (MQ=255)

                                    aCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaaa                                                                                                   <  1:1727444/140‑1 (MQ=255)

                                     cGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTaaa                                                                                                               <  1:394013/127‑1 (MQ=255)

                                       tttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGt                                                                                                >  1:658738/1‑140 (MQ=255)

                                       tttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGt                                                                                                <  1:341413/140‑1 (MQ=255)

                                        ttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTc                                                                                               <  1:1540408/140‑1 (MQ=255)

                                        ttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTc                                                                                               <  2:612834/140‑1 (MQ=255)

                                        ttttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTc                                                                                               <  1:554646/140‑1 (MQ=255)

                                          ttGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCt                                                                                             <  1:1790613/140‑1 (MQ=255)

                                            gCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTca                                                                                           <  2:405565/140‑1 (MQ=255)

                                            gCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTca                                                                                           <  1:1522550/140‑1 (MQ=255)

                                            gCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTca                                                                                           <  1:1798378/140‑1 (MQ=255)

                                            gCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTca                                                                                           <  1:505800/140‑1 (MQ=255)

                                            gCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTca                                                                                           <  1:749329/140‑1 (MQ=255)

                                              gggCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcaca                                                                                         <  2:501894/140‑1 (MQ=255)

                                              gggCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcaca                                                                                         <  1:754209/140‑1 (MQ=255)

                                              gggCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcaca                                                                                         <  2:1760148/140‑1 (MQ=255)

                                              gggCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCATACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcaca                                                                                         <  1:233673/140‑1 (MQ=255)

                                               ggCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcacac                                                                                        <  1:1471612/140‑1 (MQ=255)

                                                    gCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAatat                                                                                   >  1:539640/1‑140 (MQ=255)

                                                         cAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGa                                                                              <  2:1119729/140‑1 (MQ=255)

                                                           gcgcAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTcac                                                                                          >  2:1263149/1‑126 (MQ=255)

                                                               aGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACg                                                                            <  2:1664666/136‑1 (MQ=255)

                                                                 gCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAAt                                                                      >  2:1357720/1‑140 (MQ=255)

                                                                           tttCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGa                                                            <  1:1028502/140‑1 (MQ=255)

                                                                            ttCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGAt                                                           >  2:1780401/1‑140 (MQ=255)

                                                                                  aCTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGaa                                                     <  1:661794/140‑1 (MQ=255)

                                                                                   cTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGaaa                                                    <  1:1563006/140‑1 (MQ=255)

                                                                                     ttGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAg                                                  <  1:1648631/140‑1 (MQ=255)

                                                                                      tGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAgg                                                 >  2:124798/1‑140 (MQ=255)

                                                                                          aGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTc                                             <  1:705940/140‑1 (MQ=255)

                                                                                            cACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCaa                                           <  1:1780401/140‑1 (MQ=255)

                                                                                             aCGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAg                                          <  2:1063589/140‑1 (MQ=255)

                                                                                             aCGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAg                                          <  1:108668/140‑1 (MQ=255)

                                                                                               gTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGaa                                        <  2:381578/140‑1 (MQ=255)

                                                                                                tGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGaaa                                                    >  2:325013/1‑127 (MQ=255)

                                                                                                  gTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAata                                     <  2:1717330/140‑1 (MQ=255)

                                                                                                    ttGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAGCACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAAtata                                   <  1:1366517/140‑1 (MQ=255)

                                                                                                     tGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAg                                                  >  1:1029176/1‑124 (MQ=255)

                                                                                                      gCGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACa                                 <  1:270723/140‑1 (MQ=255)

                                                                                                       cGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTc                                             <  2:591321/127‑1 (MQ=255)

                                                                                                       cGTACCAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTc                                             >  1:591321/1‑127 (MQ=255)

                                                                                                           ccAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTc                                             <  2:404479/123‑1 (MQ=255)

                                                                                                           ccAGCTGGTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGAt                            >  2:216096/1‑140 (MQ=255)

                                                                                                                 ggTTAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGcc                      <  2:1587479/140‑1 (MQ=255)

                                                                                                                   ttAACTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCAt                    >  2:466408/1‑140 (MQ=255)

                                                                                                                      aCTGTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCAc                 <  1:124798/140‑1 (MQ=255)

                                                                                                                         gTTGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCACCAg              <  2:895862/140‑1 (MQ=255)

                                                                                                                          ttGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCACCAgg             >  2:348938/1‑140 (MQ=255)

                                                                                                                          ttGCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCACCAgg             >  2:883865/1‑140 (MQ=255)

                                                                                                                            gCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGcc                      >  1:1739669/1‑129 (MQ=255)

                                                                                                                            gCCATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCACCAGGcc           >  2:1111871/1‑140 (MQ=255)

                                                                                                                             ccATTAAATAGTTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCACCAGGCCa          >  1:1212005/1‑140 (MQ=255)

TTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGATCCCGCCATCACCAGGCCATCTGGCTG  >  NC_000913/3474424‑3474696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`