BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,664,813	G→A	intergenic (‑195/‑51)	gadW ← / → gadY	DNA‑binding transcriptional dual regulator GadW/small regulatory RNA GadY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,664,813	0	G	A	100.0%	406.5 / NA	112	intergenic (‑195/‑51)	gadW/gadY	DNA‑binding transcriptional dual regulator GadW/small regulatory RNA GadY
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (53/59); total (53/59)

Only 100 of 112 total aligned reads displayed.

ATGCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATGTTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCCTCTTCCCGGT  >  NC_000913/3664676‑3664948

atgCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATAtt                                                                                                                                       >  1:286375/1‑140 (MQ=255)

atgCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATAtt                                                                                                                                       >  2:264248/1‑140 (MQ=255)

atgCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATAtt                                                                                                                                       >  1:1497389/1‑140 (MQ=255)

  gCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTta                                                                                                                                     >  1:1665681/1‑140 (MQ=255)

  gCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTta                                                                                                                                     >  2:935152/1‑140 (MQ=255)

  gCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTta                                                                                                                                     >  1:138045/1‑140 (MQ=255)

   ccAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTtat                                                                                                                                    <  1:1448940/140‑1 (MQ=255)

       aCTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATaaaa                                                                                                                                >  1:917507/1‑140 (MQ=255)

          gTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATaaaaaaa                                                                                                                             >  2:1033567/1‑140 (MQ=255)

           tttCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAAt                                                                                                                            >  1:1568256/1‑140 (MQ=255)

           tttCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAAt                                                                                                                            >  1:453211/1‑140 (MQ=255)

           tttCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAAt                                                                                                                            >  1:537259/1‑140 (MQ=255)

           tttCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAAt                                                                                                                            >  2:1297727/1‑140 (MQ=255)

           tttCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAAt                                                                                                                            >  2:335875/1‑140 (MQ=255)

           tttCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAAt                                                                                                                            >  2:16112/1‑140 (MQ=255)

            ttCTTAGCGCAAAAACTGCCAGATTTGGGAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATg                                                                                                                           >  2:290448/1‑140 (MQ=255)

              cTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGc                                                                                                                         <  1:1123942/140‑1 (MQ=255)

              cTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGc                                                                                                                         <  2:263215/140‑1 (MQ=255)

               ttAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGTACAGCGTATAGCTTATATTTATAAAAAAATGGCt                                                                                                                        <  2:1152641/140‑1 (MQ=255)

               ttAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCt                                                                                                                        <  1:1033567/140‑1 (MQ=255)

               ttAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCt                                                                                                                        <  2:867371/140‑1 (MQ=255)

                  gcgcAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGAt                                                                                                                     <  1:16112/140‑1 (MQ=255)

                     cAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCtt                                                                                                                  >  2:1566345/1‑140 (MQ=255)

                     cAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCtt                                                                                                                  >  2:1489320/1‑140 (MQ=255)

                     cAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCtt                                                                                                                  >  1:258866/1‑140 (MQ=255)

                       aaaaCTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTAt                                                                                                                >  2:85465/1‑140 (MQ=255)

                          aCTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTc                                                                                                             <  2:49185/140‑1 (MQ=255)

                              ccAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGt                                                                                                         <  2:82833/140‑1 (MQ=255)

                               cAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACCGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTa                                                                                                        <  2:1584959/140‑1 (MQ=255)

                                aGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTaa                                                                                                       <  2:917507/140‑1 (MQ=255)

                                        tAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCCGATCTTATTTCCAGTAAAAGTtata                                                                                               >  1:1130801/1‑140 (MQ=255)

                                         aGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTatat                                                                                              <  1:466659/140‑1 (MQ=255)

                                         aGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTatat                                                                                              <  1:85465/140‑1 (MQ=255)

                                         aGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTatat                                                                                              <  1:264248/140‑1 (MQ=255)

                                           gACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATAttt                                                                                            <  2:1475630/140‑1 (MQ=255)

                                            aCCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTa                                                                                           >  1:1166099/1‑140 (MQ=255)

                                             ccAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTaa                                                                                          >  2:200520/1‑140 (MQ=255)

                                                aaaTTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACtt                                                                                       >  2:1493589/1‑140 (MQ=255)

                                                     tATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTga                                                                                  >  2:1328507/1‑140 (MQ=255)

                                                      aTCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTgag                                                                                 >  2:1480053/1‑140 (MQ=255)

                                                         cacaAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGc                                                                              <  2:1568256/140‑1 (MQ=255)

                                                           caAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGcac                                                                            >  1:98334/1‑140 (MQ=255)

                                                             aaGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACaa                                                                          >  1:1362691/1‑140 (MQ=255)

                                                                    tttGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTcc                                                                   <  2:684753/140‑1 (MQ=255)

                                                                    tttGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTcc                                                                   <  1:1809828/140‑1 (MQ=255)

                                                                    tttGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTcc                                                                   <  2:1166099/140‑1 (MQ=255)

                                                                      tGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCg                                                                 <  2:138045/140‑1 (MQ=255)

                                                                      tGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCg                                                                 <  2:1362691/140‑1 (MQ=255)

                                                                        cATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTg                                                               >  2:538161/1‑140 (MQ=255)

                                                                        cATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTg                                                               >  2:62945/1‑140 (MQ=255)

                                                                        cATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTg                                                               >  1:1145019/1‑140 (MQ=255)

                                                                        cATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTg                                                               >  2:1622824/1‑140 (MQ=255)

                                                                        cATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTg                                                               >  2:1309320/1‑140 (MQ=255)

                                                                           aaCAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCa                                                            <  1:1649240/140‑1 (MQ=255)

                                                                            aCAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCaa                                                           <  1:1328507/140‑1 (MQ=255)

                                                                                ttAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAgg                                                       >  2:250808/1‑140 (MQ=255)

                                                                                ttAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAgg                                                       <  2:1003187/140‑1 (MQ=255)

                                                                                ttAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAgg                                                       <  2:537259/140‑1 (MQ=255)

                                                                                ttAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAgg                                                       <  2:918110/140‑1 (MQ=255)

                                                                                 tAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAggg                                                      <  1:1282514/140‑1 (MQ=255)

                                                                                 tAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAggg                                                      <  1:200520/140‑1 (MQ=255)

                                                                                 tAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAggg                                                      <  1:1493589/140‑1 (MQ=255)

                                                                                  aaTTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAAc                                                          <  2:1265560/135‑1 (MQ=255)

                                                                                  aaTTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAAc                                                          >  1:1265560/1‑135 (MQ=255)

                                                                                  aaTTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGa                                                     >  2:1264735/1‑140 (MQ=255)

                                                                                        taataaGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTta                                               >  1:1546627/1‑140 (MQ=255)

                                                                                        taataaGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTta                                               >  1:957018/1‑140 (MQ=255)

                                                                                        taataaGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTta                                               >  1:36733/1‑140 (MQ=255)

                                                                                         aataaGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTtat                                              >  2:405834/1‑140 (MQ=255)

                                                                                         aataaGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTtat                                              <  1:1309320/140‑1 (MQ=255)

                                                                                          ataaGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTtata                                             >  2:1588273/1‑140 (MQ=255)

                                                                                           taaGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATaa                                            <  1:405834/140‑1 (MQ=255)

                                                                                             aGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACg                                          <  1:935152/140‑1 (MQ=255)

                                                                                                 aaTGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGttt                                      >  2:1656739/1‑140 (MQ=255)

                                                                                                  aTGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTtta                                     <  2:690130/140‑1 (MQ=255)

                                                                                                  aTGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTtta                                     <  1:250808/140‑1 (MQ=255)

                                                                                                   tGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTttat                                    >  2:539992/1‑140 (MQ=255)

                                                                                                    gcagcaCGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTttatt                                   <  2:1145019/140‑1 (MQ=255)

                                                                                                      agcaCGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAg                                 >  1:12033/1‑140 (MQ=255)

                                                                                                         aCGAATATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCt                              >  2:820890/1‑140 (MQ=255)

                                                                                                            aaTATATTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGga                           <  1:229191/140‑1 (MQ=255)

                                                                                                             atatatTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGgag                          <  2:36733/140‑1 (MQ=255)

                                                                                                                tatTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACg                       >  1:1432613/1‑140 (MQ=255)

                                                                                                                tatTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACg                       <  2:1308571/140‑1 (MQ=255)

                                                                                                                 atTTTCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACgg                      <  1:290448/140‑1 (MQ=255)

                                                                                                                  ttttCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGc                     <  1:396763/140‑1 (MQ=255)

                                                                                                                  ttttCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGc                     <  2:683926/140‑1 (MQ=255)

                                                                                                                  ttttCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGc                     <  1:1512235/140‑1 (MQ=255)

                                                                                                                  ttttCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGc                     <  2:1432613/140‑1 (MQ=255)

                                                                                                                     tCGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGa                  >  2:360562/1‑140 (MQ=255)

                                                                                                                      cGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGAc                 >  1:1022569/1‑140 (MQ=255)

                                                                                                                      cGCACAGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGAc                 >  1:433931/1‑140 (MQ=255)

                                                                                                                        cacaGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTa               >  1:698570/1‑140 (MQ=255)

                                                                                                                        cacaGCGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTa               >  1:1592563/1‑140 (MQ=255)

                                                                                                                             cGTATAGCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCctc          >  2:950006/1‑140 (MQ=255)

                                                                                                                                   gCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCCTCTTCCCg    <  1:1528541/140‑1 (MQ=255)

                                                                                                                                   gCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCCTCTTCCCg    <  1:283715/140‑1 (MQ=255)

                                                                                                                                   gCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCCTCTTCCCg    <  1:457292/140‑1 (MQ=255)

                                                                                                                                   gCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCCTCTTCCCg    <  2:1462716/140‑1 (MQ=255)

                                                                                                                                   gCTTATATTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCCTCTTCCCg    <  2:1665681/140‑1 (MQ=255)

ATGCCAGACTGTTTCTTAGCGCAAAAACTGCCAGATTTGGTAGGACCAAAATTTATCCACAAAGTAGTTTTGCATAACAGTTAATTGATAATAAGTAAATGCAGCACGAATATATTTTCGCACAGCGTATAGCTTATGTTTATAAAAAAATGGCTGATCTTATTTCCAGTAAAAGTTATATTTAACTTACTGAGAGCACAAAGTTTCCCGTGCCAACAGGGAGTGTTATAACGGTTTATTAGTCTGGAGACGGCAGACTATCCTCTTCCCGGT  >  NC_000913/3664676‑3664948

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`