Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,169,898 IS1 (+) +9 bp pseudogene (262‑270/475 nt) gatR ← DNA‑binding transcriptional repressor GatR, N‑terminal fragment

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1978503 =NA (NA)143 (1.410) 77/276 0.1 99.3% noncoding (768/768 nt) IS1 repeat region
?NC_000913 2169898 = 1 (0.010)pseudogene (270/475 nt) gatR DNA‑binding transcriptional repressor GatR, N‑terminal fragment
* ? NC_000913 = 1979270NA (NA)119 (1.180) 64/276 0.2 99.1% noncoding (1/768 nt) IS1 repeat region
?NC_000913 = 2169906 1 (0.010)pseudogene (262/475 nt) gatR DNA‑binding transcriptional repressor GatR, N‑terminal fragment

Only 100 of 119 total aligned reads displayed.

CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979132‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGACATTA  <  NC_000913/2169906‑2169770
                                                                                                                                                                                                                                                                                    
CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT                                                                                                                                          >  2:826769/1‑140
CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT                                                                                                                                          >  1:740635/1‑140
CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCT                                                                                                                                          <  1:187306/140‑1
 TGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTA                                                                                                                                         <  1:137085/140‑1
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAC                                                                                                                                        <  2:737065/140‑1
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAC                                                                                                                                        >  2:1691343/1‑140
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAC                                                                                                                                        <  2:1341007/140‑1
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAC                                                                                                                                        >  2:1120323/1‑140
  GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAC                                                                                                                                        >  1:1350084/1‑140
   ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACG                                                                                                                                       <  1:524004/140‑1
   ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACG                                                                                                                                       >  2:524004/1‑140
    TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGA                                                                                                                                      >  1:1451414/1‑140
    TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGA                                                                                                                                      >  1:1538022/1‑140
    TGTCCGGCGGTACTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGA                                                                                                                                      >  2:1614547/1‑140
      TCCGGCGGTACTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACC                                                                                                                                    <  1:1614547/140‑1
        CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTT                                                                                                                                  >  1:1702726/1‑140
           CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAA                                                                                                                               >  1:466939/1‑140
            GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAAT                                                                                                                              <  2:1422228/140‑1
            GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAAT                                                                                                                              <  1:1330163/140‑1
            GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAAT                                                                                                                              <  2:562804/140‑1
            GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAAT                                                                                                                              <  1:685879/140‑1
            GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAAT                                                                                                                              <  1:10888/140‑1
              TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGA                                                                                                                            <  2:1702726/140‑1
                CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAG                                                                                                                          <  2:1295168/140‑1
                CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAG                                                                                                                          <  2:1101789/140‑1
                CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAG                                                                                                                          >  1:826705/1‑140
                CTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAG                                                                                                                          >  1:1313805/1‑140
                CTTTTGCCGTTACACACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAG                                                                                                                          >  2:1195662/1‑140
                  TTTGCTGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGT                                                                                                                        <  1:244967/140‑1
                  TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGT                                                                                                                        <  2:1603777/140‑1
                  TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGT                                                                                                                        <  1:942136/140‑1
                   TTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTT                                                                                                                       <  2:1100441/140‑1
                     GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTAT                                                                                                                     >  1:1615681/1‑140
                     GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTAT                                                                                                                     <  2:834625/140‑1
                          TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTAT                                                                                                                >  1:1273582/1‑140
                           ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTAT                                                                                                                <  1:1702290/139‑1
                           ACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTAT                                                                                                                >  2:1702290/1‑139
                                 CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGT                                                                                                         <  2:457286/140‑1
                                  ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTG                                                                                                        <  2:1273582/140‑1
                                   CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGC                                                                                                       >  2:869443/1‑140
                                   CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGC                                                                                                       >  2:597095/1‑140
                                   CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGC                                                                                                       >  1:1405598/1‑140
                                    CCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCG                                                                                                      <  1:993647/140‑1
                                           GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAGCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCA                                                                                               <  1:598714/140‑1
                                           GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCA                                                                                               <  1:140115/140‑1
                                           GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCA                                                                                               >  1:1351115/1‑140
                                           GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCA                                                                                               <  2:1691270/140‑1
                                             AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACA                                                                                             >  2:1042958/1‑140
                                              GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAG                                                                                            >  1:521986/1‑140
                                              GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAG                                                                                            >  2:1156810/1‑140
                                               CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGC                                                                                           <  1:1156810/140‑1
                                                TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCC                                                                                          <  1:1320134/140‑1
                                                 GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCG                                                                                         <  2:1229038/140‑1
                                                  AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGC                                                                                        >  1:1700300/1‑140
                                                  AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGC                                                                                        >  1:362143/1‑140
                                                      GGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAAT                                                                                    >  2:581673/1‑140
                                                         GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAA                                                                                 >  1:670810/1‑140
                                                             CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGA                                                                             <  2:830457/140‑1
                                                               GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAACATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATT                                                                           >  2:1314719/1‑140
                                                                CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTG                                                                          >  2:930224/1‑140
                                                                CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTG                                                                          <  1:1042958/140‑1
                                                                 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGC                                                                         >  1:1121086/1‑140
                                                                 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGC                                                                         >  2:1610979/1‑140
                                                                   ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCG                                                                       >  1:942369/1‑140
                                                                          CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGA                                                                >  1:1224217/1‑140
                                                                             AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTG                                                                          <  1:1477938/127‑1
                                                                             AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTG                                                                          >  2:1477938/1‑127
                                                                               GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCAT                                                           <  2:1313805/140‑1
                                                                               GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCAT                                                           >  2:121783/1‑140
                                                                                CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATC                                                          <  1:1120323/140‑1
                                                                                 CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCG                                                         >  1:982271/1‑140
                                                                                  ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGA                                                        >  2:575300/1‑140
                                                                                     GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAAT                                                     >  2:455376/1‑140
                                                                                       AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTT                                                   >  1:1603519/1‑140
                                                                                               AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCG                                           <  2:670810/140‑1
                                                                                               AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCG                                           <  2:1405598/140‑1
                                                                                               AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCG                                           <  2:1615681/140‑1
                                                                                                     ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTT                                     <  2:1451414/140‑1
                                                                                                      CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTT                                    >  2:305368/1‑140
                                                                                                       CATCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTA                                   <  2:1351115/140‑1
                                                                                                         TCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAAT                                 <  2:1210122/140‑1
                                                                                                         TCATACACTAAATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAAT                                 <  1:1691343/140‑1
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTAC                       >  2:681737/1‑140
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTAC                       >  1:865556/1‑140
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAAT                                 >  1:725604/1‑130
                                                                                                                   AATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAAT                                 <  2:725604/130‑1
                                                                                                                    ATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACC                      >  1:268614/1‑140
                                                                                                                    ATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAAT                                 <  1:300975/129‑1
                                                                                                                    ATCAGTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAAT                                 >  2:300975/1‑129
                                                                                                                        GTAAGTTGGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATC                  >  2:1425736/1‑140
                                                                                                                               GGCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAA           >  2:1093523/1‑140
                                                                                                                                GCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAAT          <  2:1093592/140‑1
                                                                                                                                GCAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGAGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAAT          <  2:541020/140‑1
                                                                                                                                 CAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAAT                   <  2:683055/130‑1
                                                                                                                                 CAGCATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAAT                   >  1:683055/1‑130
                                                                                                                                    CATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGAC      <  1:305368/140‑1
                                                                                                                                    CATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGAC      <  1:1195662/140‑1
                                                                                                                                    CATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGAC      <  2:362143/140‑1
                                                                                                                                    CATCACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGAC      <  2:190999/140‑1
                                                                                                                                       CACCTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGACATT   >  2:1592442/1‑140
                                                                                                                                                                                                                                                                                    
CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1979132‑1979270
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGACATTA  <  NC_000913/2169906‑2169770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.