| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,617,797 | G→C | A74P (GCT→CCT) | yfgD → | putative oxidoreductase YfgD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,617,797 | 0 | G | C | 99.2% | 470.2 / ‑4.5 | 119 | A74P (GCT→CCT) | yfgD | putative oxidoreductase YfgD |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (63/55); minor base T (1/0); total (64/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.57e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
AGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGGCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGT > NC_000913/2617663‑2617930 | aGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGAc > 1:377114/1‑140 (MQ=255)aGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGAc > 1:603869/1‑140 (MQ=255) ggtgCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTa > 2:704475/1‑140 (MQ=255) gtgCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAg > 2:946203/1‑140 (MQ=255) gtgCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAg > 2:1196589/1‑140 (MQ=255) tgCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGc > 1:1699016/1‑140 (MQ=255) tgCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGc > 1:1386590/1‑140 (MQ=255) ttcccTGGAGCCCCCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAag < 2:501011/137‑1 (MQ=255) tACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAaga < 1:923152/140‑1 (MQ=255) ttGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGgcg < 2:413578/140‑1 (MQ=255) tggggaCCCCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGgcg < 2:1138522/136‑1 (MQ=255) cacCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGAtt < 2:946918/140‑1 (MQ=255) cacCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATC‑TTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTc > 1:1227941/1‑140 (MQ=255) cccGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCa > 2:1368577/1‑140 (MQ=255) cccGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCa > 1:211568/1‑140 (MQ=255) cccGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCa > 1:5476/1‑140 (MQ=255) cccGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCa > 2:1470428/1‑140 (MQ=255) cccGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCa > 2:378859/1‑140 (MQ=255) cccGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCa > 1:1061240/1‑140 (MQ=255) cccGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGACCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCa > 1:1605045/1‑140 (MQ=255) cgccgATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAgg < 2:1110471/140‑1 (MQ=255) cgccgATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAgg < 2:961631/140‑1 (MQ=255) cgccgATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAgg < 2:603869/140‑1 (MQ=255) cgccgATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAgg < 1:1248622/140‑1 (MQ=255) gccgATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGc > 2:960162/1‑140 (MQ=255) ccgATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCa < 1:1132127/140‑1 (MQ=255) ccgATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCa < 2:479357/140‑1 (MQ=255) gATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAAt < 1:726903/140‑1 (MQ=255) aTGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAAtg < 1:946203/140‑1 (MQ=255) gCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGa < 2:282333/140‑1 (MQ=255) gCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGa < 2:467877/140‑1 (MQ=255) cTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAgg > 2:1685934/1‑124 (MQ=255) tttGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGACCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGGGGATAATCCGAAGCTGa < 2:1605045/140‑1 (MQ=255) cTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGa < 2:1061240/140‑1 (MQ=255) cTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGa < 2:383291/140‑1 (MQ=255) tGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAg > 2:1375958/1‑140 (MQ=255) ggggATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGa > 1:691606/1‑129 (MQ=255) ggggATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGa < 2:691606/129‑1 (MQ=255) ggATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATtgtg > 2:1077494/1‑140 (MQ=255) ggATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATtgtg > 2:101547/1‑140 (MQ=255) aTGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGt > 1:413723/1‑140 (MQ=255) aTGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGt > 2:1187607/1‑140 (MQ=255) tGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTc < 2:1176809/140‑1 (MQ=255) tGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTc < 2:256842/140‑1 (MQ=255) tGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTc < 2:1032446/140‑1 (MQ=255) aaTAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTcgc > 1:735848/1‑140 (MQ=255) gcgcCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAAt > 2:1637280/1‑140 (MQ=255) cgcCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATg > 1:1047557/1‑140 (MQ=255) gcCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATgg > 2:793571/1‑140 (MQ=255) cccGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGc > 1:930981/1‑140 (MQ=255) cccGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGc > 1:737056/1‑140 (MQ=255) cccGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGc > 2:854793/1‑140 (MQ=255) ccGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGAGGTCGCGAATGGCa < 2:1286451/140‑1 (MQ=255) gTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCaaa > 1:955569/1‑140 (MQ=255) gTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCaaa > 1:620308/1‑140 (MQ=255) gTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCaaa > 1:265990/1‑140 (MQ=255) gTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCaaa > 1:291538/1‑140 (MQ=255) tGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAg > 2:138767/1‑140 (MQ=255) tGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCgg < 2:377114/140‑1 (MQ=255) aTGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGAt < 1:1368577/140‑1 (MQ=255) aTGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGAt > 1:106533/1‑140 (MQ=255) aTGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGAt < 1:1400587/140‑1 (MQ=255) gcgcCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTg > 1:1197007/1‑140 (MQ=255) cgcCAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTgg < 2:291538/140‑1 (MQ=255) cAGAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGgtcg < 1:1196589/140‑1 (MQ=255) gAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGgtcgtc < 2:620308/140‑1 (MQ=255) gAAAGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGgtcgtc < 2:343751/140‑1 (MQ=255) aaGAGGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCa < 2:265990/140‑1 (MQ=255) agagGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCAc < 2:1386590/140‑1 (MQ=255) agagGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCAc < 1:481839/140‑1 (MQ=255) agagGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCAc < 1:1637280/140‑1 (MQ=255) agGATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCg > 1:1205473/1‑140 (MQ=255) ggATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCgg > 1:293891/1‑140 (MQ=255) gATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGa < 1:378859/140‑1 (MQ=255) gATCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGa < 2:955569/140‑1 (MQ=255) aTCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAg > 2:759590/1‑140 (MQ=255) aTCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAg > 2:520343/1‑140 (MQ=255) aTCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAg < 2:1197007/140‑1 (MQ=255) tCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGc < 1:1375958/140‑1 (MQ=255) tCTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGc < 1:1470428/140‑1 (MQ=255) cTTTATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCa > 2:1120551/1‑140 (MQ=255) tttATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAg < 2:146139/137‑1 (MQ=255) ttATAAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCAcc < 1:98759/132‑1 (MQ=255) taAAGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTAc > 1:148580/1‑140 (MQ=255) aGAACTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTgg > 1:897170/1‑140 (MQ=255) aaCTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGaa > 2:1182577/1‑140 (MQ=255) aaCTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGaa > 1:1491229/1‑140 (MQ=255) aaCTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGaa > 1:111881/1‑140 (MQ=255) aaCTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGaa > 2:1005323/1‑140 (MQ=255) aCTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGaaa > 1:589872/1‑140 (MQ=255) aCTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGaaa > 1:406472/1‑140 (MQ=255) aCTGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGaaa > 2:1103810/1‑140 (MQ=255) tGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATc < 2:735848/140‑1 (MQ=255) tGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATc < 1:59839/140‑1 (MQ=255) tGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATc < 2:372092/140‑1 (MQ=255) tGAACCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATc > 2:59839/1‑140 (MQ=255) aaCCTGTCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGt > 2:839014/1‑140 (MQ=255) aaCCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGt > 1:132191/1‑140 (MQ=255) aaCCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGt < 2:589872/140‑1 (MQ=255) aaCCTGCCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGt < 1:793571/140‑1 (MQ=255) | AGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGGCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGT > NC_000913/2617663‑2617930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |