Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,760,355 T→C G457G (GGT→GGC)  yfjI → CP4‑57 prophage; protein YfjI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,760,3550TC100.0% 433.6 / NA 110G457G (GGT→GGC) yfjICP4‑57 prophage; protein YfjI
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (38/72);  total (38/72)

Only 100 of 111 total aligned reads displayed.

CGCAAAAATTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGTAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGG  >  NC_000913/2760219‑2760491
                                                                                                                                        |                                                                                                                                        
cGCAAAAATTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCaaa                                                                                                                                       >  1:426608/1‑140 (MQ=255)
cGCAAAAATTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCaaa                                                                                                                                       >  1:42860/1‑140 (MQ=255)
 gCAAAAATTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCaaaa                                                                                                                                      >  1:1377056/1‑140 (MQ=255)
   aaaaaTTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACa                                                                                                                                    >  1:56878/1‑140 (MQ=255)
    aaaaTTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACaa                                                                                                                                   <  2:376181/140‑1 (MQ=255)
      aaTTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGcaaaacaaaa                                                                                                                                 <  1:459113/140‑1 (MQ=255)
         tttCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAaata                                                                                                                              <  2:923580/140‑1 (MQ=255)
           tcttcCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAaataat                                                                                                                            <  2:82923/140‑1 (MQ=255)
             ttcCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAAtaataa                                                                                                                          >  2:1348500/1‑140 (MQ=255)
             ttcCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAAtaataa                                                                                                                          <  1:860223/140‑1 (MQ=255)
             ttcCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAAtaataa                                                                                                                          >  2:176553/1‑140 (MQ=255)
                 tGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACAt                                                                                                                      <  1:244539/140‑1 (MQ=255)
                   cATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATaa                                                                                                                    <  2:161989/140‑1 (MQ=255)
                    aTCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAAc                                                                                                                   <  1:841082/140‑1 (MQ=255)
                       aaGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCa                                                                                                                >  2:1124645/1‑140 (MQ=255)
                        aGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCAt                                                                                                               <  2:945592/140‑1 (MQ=255)
                                   atCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTg                                                                                                    >  2:918852/1‑140 (MQ=255)
                                    tCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGa                                                                                                   >  1:236006/1‑140 (MQ=255)
                                       tACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGAttt                                                                                                >  1:729796/1‑140 (MQ=255)
                                       tACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGAttt                                                                                                >  1:692797/1‑140 (MQ=255)
                                         cAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTa                                                                                              >  2:787791/1‑140 (MQ=255)
                                           aTTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAAt                                                                                            <  2:931328/140‑1 (MQ=255)
                                             ttGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGa                                                                                          <  1:393534/140‑1 (MQ=255)
                                              tGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGAc                                                                                         >  2:260164/1‑140 (MQ=255)
                                              tGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGAc                                                                                         >  2:904366/1‑140 (MQ=255)
                                              tGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGAc                                                                                         >  1:802279/1‑140 (MQ=255)
                                              tGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGAc                                                                                         >  1:1059348/1‑140 (MQ=255)
                                              tGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGAc                                                                                         >  2:1026538/1‑140 (MQ=255)
                                                     aataaatTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTaa                                                                                  <  1:1064434/140‑1 (MQ=255)
                                                      ataaatTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTaaa                                                                                 <  2:1108226/140‑1 (MQ=255)
                                                      ataaatTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTaaa                                                                                 <  2:783560/140‑1 (MQ=255)
                                                          atTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGa                                                                             <  1:1130145/140‑1 (MQ=255)
                                                          atTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGa                                                                             <  2:199201/140‑1 (MQ=255)
                                                          atTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGa                                                                             <  2:593771/140‑1 (MQ=255)
                                                          atTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGa                                                                             <  2:1039774/140‑1 (MQ=255)
                                                            ttAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACt                                                                           <  2:100637/140‑1 (MQ=255)
                                                                    cGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTaa                                                                   >  1:780489/1‑140 (MQ=255)
                                                                         cAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTa                                                              <  1:330017/140‑1 (MQ=255)
                                                                               aaaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaaca                                                        <  1:560695/140‑1 (MQ=255)
                                                                               aaaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaaca                                                        <  1:1124645/140‑1 (MQ=255)
                                                                               aaaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaaca                                                        <  1:614780/140‑1 (MQ=255)
                                                                               aaaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaaca                                                        <  2:1001741/140‑1 (MQ=255)
                                                                               aaaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaaca                                                        <  1:1026538/140‑1 (MQ=255)
                                                                                aaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaacaa                                                       <  2:959445/140‑1 (MQ=255)
                                                                                aaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaacaa                                                       <  2:878159/140‑1 (MQ=255)
                                                                                aaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaaca                                                        <  1:1243903/139‑1 (MQ=255)
                                                                                aaTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaaca                                                        >  2:1243903/1‑139 (MQ=255)
                                                                                 aTGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAaaacaaa                                                      >  1:331223/1‑140 (MQ=255)
                                                                                      ttaattaGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTa                                                 >  1:1299470/1‑140 (MQ=255)
                                                                                        aattaGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTaaa                                               >  2:611279/1‑140 (MQ=255)
                                                                                            aGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCa                                           <  1:450611/140‑1 (MQ=255)
                                                                                            aGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCa                                           >  2:342816/1‑140 (MQ=255)
                                                                                               aTCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGtt                                        <  2:729796/140‑1 (MQ=255)
                                                                                                tCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTc                                       >  1:1256860/1‑140 (MQ=255)
                                                                                                   tAATTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGa                                    >  1:1138252/1‑140 (MQ=255)
                                                                                                    aaTTTCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGAt                                   >  1:1166280/1‑140 (MQ=255)
                                                                                                        tCACAAAACAAAATATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATaaaa                               <  1:343973/140‑1 (MQ=255)
                                                                                                           caaaacaaaaTATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCt                            >  1:417193/1‑140 (MQ=255)
                                                                                                            aaaacaaaaTATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCtt                           <  1:926196/140‑1 (MQ=255)
                                                                                                            aaaacaaaaTATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCtt                           >  2:1056152/1‑140 (MQ=255)
                                                                                                                caaaaTATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCa                       <  1:787791/140‑1 (MQ=255)
                                                                                                                caaaaTATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCa                       <  1:518495/140‑1 (MQ=255)
                                                                                                                 aaaaTATTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCAt                      >  1:160827/1‑140 (MQ=255)
                                                                                                                     tatTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTg                  <  1:1056152/140‑1 (MQ=255)
                                                                                                                      atTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGa                 <  2:209010/140‑1 (MQ=255)
                                                                                                                      atTTATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGa                 <  2:692797/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  2:681723/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  2:962618/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  2:936837/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  2:914421/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  2:84333/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  1:232434/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  2:535558/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  1:695933/140‑1 (MQ=255)
                                                                                                                       tttATATCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGAt                <  1:986133/140‑1 (MQ=255)
                                                                                                                          atatCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAgg             <  1:1019336/140‑1 (MQ=255)
                                                                                                                          atatCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTATTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAgg             <  2:780489/140‑1 (MQ=255)
                                                                                                                          atatCTTAATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAgg             >  1:795413/1‑140 (MQ=255)
                                                                                                                           tatCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGt            <  2:1138252/140‑1 (MQ=255)
                                                                                                                           tatCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGt            <  1:260164/140‑1 (MQ=255)
                                                                                                                           tatCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGt            <  2:569280/140‑1 (MQ=255)
                                                                                                                            atCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTa           <  1:745060/140‑1 (MQ=255)
                                                                                                                            atCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTa           <  2:802279/140‑1 (MQ=255)
                                                                                                                            atCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTa           <  2:840540/140‑1 (MQ=255)
                                                                                                                            atCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTa           <  1:1278759/140‑1 (MQ=255)
                                                                                                                            atCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTa           <  1:1253675/140‑1 (MQ=255)
                                                                                                                             tCTTCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTaa          >  1:842213/1‑140 (MQ=255)
                                                                                                                               ttCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAata        >  1:468326/1‑140 (MQ=255)
                                                                                                                               ttCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAata        <  2:165583/140‑1 (MQ=255)
                                                                                                                               ttCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGCTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGt            <  2:658421/136‑1 (MQ=255)
                                                                                                                               ttCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGCTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGt            >  1:658421/1‑136 (MQ=255)
                                                                                                                                tCATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAatat       <  2:1059348/140‑1 (MQ=255)
                                                                                                                                 cATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAgg             <  1:135202/133‑1 (MQ=255)
                                                                                                                                 cATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAgg             >  2:135202/1‑133 (MQ=255)
                                                                                                                                 cATGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAatata      >  1:1267740/1‑140 (MQ=255)
                                                                                                                                  aTGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAatatat     <  1:1120516/140‑1 (MQ=255)
                                                                                                                                   tGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAAtatata    <  2:930719/140‑1 (MQ=255)
                                                                                                                                   tGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAAtatata    <  2:282227/140‑1 (MQ=255)
                                                                                                                                   tGGGGCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAAtatata    <  1:1356454/140‑1 (MQ=255)
                                                                                                                                     gggCAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAgg  <  2:516733/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                        
CGCAAAAATTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGTAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGATTTTAATGACAATCTAAAAGGACTTAATTTAAGAGTAAAAACAAACTCTAAACCCAGTTCGGATAAAAGCTTGTCATCTTGATAGGTAATATATAGG  >  NC_000913/2760219‑2760491

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑