| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 696863 = | 0 (0.000) | 46 (0.520) +GAAGAAACAATC |
22/252 | 2.1 | 58.0% | intergenic (‑33/+2) | glnW/glnU | tRNA‑Gln/tRNA‑Gln |
| ? | NC_000913 | = 697134 | 73 (0.750) | intergenic (‑1/+379) | metT/asnB | tRNA‑Met/asparagine synthetase B | |||||
CCGCAAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/697001‑696863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACC < NC_000913/697134‑697058 |||||||||||| CCGCAAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCG < 1:2547833/140‑1 GCAAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAA > 1:1023830/1‑140 GCAAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAA > 1:2059992/1‑140 CAAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAG > 2:2385945/1‑140 AAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGA < 1:1746403/140‑1 GTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAAC < 1:1328006/140‑1 GTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAA < 1:1927891/140‑1 AGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGG < 1:1233639/140‑1 TTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCT < 1:1148694/140‑1 AGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCTCGGACCCCAGCCATCGAATGACCCATCTGGCTACGc > 2:1704787/1‑139 TCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAG < 1:1746962/140‑1 TCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCT < 2:1554566/140‑1 TCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCT < 2:1089557/140‑1 TCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCT < 2:1476873/140‑1 TCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCT < 2:2488980/140‑1 TCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCT < 1:1246456/140‑1 CGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTC > 1:1722812/1‑140 CGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTC > 2:1039343/1‑140 CCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAG < 2:2573318/140‑1 CCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAG < 1:2376289/140‑1 CCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAG < 1:1681614/140‑1 CCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAACCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGG > 1:1485043/1‑140 CGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGT < 1:2287821/140‑1 CGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGT < 2:2463581/140‑1 CATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAG < 1:2409173/140‑1 ATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGC > 2:1286765/1‑140 TTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCA > 1:2008441/1‑140 TCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCAC < 1:2474574/140‑1 CACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACA < 2:2089760/140‑1 CACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACA < 2:2059992/140‑1 CACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACA > 2:1102688/1‑140 CCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATC < 1:1452722/140‑1 AGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCAC < 1:1470066/140‑1 AGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCAC < 2:2231841/140‑1 GAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACT < 2:1023830/140‑1 AAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTC > 1:1551571/1‑140 AAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTC > 2:2473783/1‑140 AAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTC > 2:1812171/1‑140 AGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCAT < 2:1709497/140‑1 TGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGA > 1:1553506/1‑140 ATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTC > 1:2598201/1‑140 TGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCA < 1:2385945/140‑1 GGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACA > 1:1014336/1‑140 GTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGG > 1:1978104/1‑140 GTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGG > 2:1851295/1‑140 GTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCCGTCCACCTAGCTCAGATGGTCAGAGCACACCGCTCATAATGACGGGGGCGCAGG > 2:1535451/1‑140 GTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGACATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGG > 1:1146865/1‑140 AAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATC < 2:2008441/140‑1 AGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCC > 2:2444279/1‑140 AGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCC > 2:1656457/1‑140 AGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCC > 2:1416625/1‑140 AGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGGCACAGGTTCGAATCCCGTCGTA > 2:1736534/1‑140 CGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATCGAAGAAACAATCTGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACC > 1:2035391/1‑140 |||||||||||| CCGCAAGGTGTGCGAGTTCAAGTCTCGCCTCCCGCACCATTCACCAGAAAGCGTTGTACGGATGGGGTATCGCCAAGCGGTAAGGCACCGGTTTTTGATACCGGCATTCCCTGGTTCGAATCCAGGTACCCCAGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/697001‑696863‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAATCCCGTCGTAGCCACC < NC_000913/697134‑697058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |