New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 252124850 (0.510)19 (0.220)
+TAAACACTTTTTAAC		 7/246 5.1 31.9% noncoding (76/76 nt) valY tRNA‑Val
?NC_000913 2947495 = 41 (0.420)intergenic (+32/‑2) metZ/metW tRNA‑Met/tRNA‑Met
Rejected: Coverage evenness skew score above cutoff.

AGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2521170‑2521248
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAA  >  NC_000913/2947495‑2947578
                                                                               |||||||||||||||                                                                                    
cacggagGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGA                                        >  1:406498/8‑140
    gagGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGc                                    >  2:311438/4‑139
       GATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGccgc                                 <  1:690711/140‑5
       GATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGccgc                                 <  2:127227/140‑5
        ATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGccgca                                <  2:406498/140‑6
          TAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGcagg                              >  1:423145/1‑136
          TAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCA                                                >  1:251675/1‑122
          TAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCA                                                <  2:251675/122‑1
              TCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCA                          <  1:825591/140‑1
                  CTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATC                      >  1:834590/1‑140
                    GGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCt                    <  1:259224/140‑2
                      GAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGc                                 <  1:237835/125‑2
                      GAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGc                                 >  2:237835/1‑124
                        GAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCC                <  2:869633/140‑1
                           catctgCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCG             <  1:538753/134‑1
                            atctgCCTTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGC            >  1:89018/6‑140
                                   TTACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCAACCAAa     <  2:89018/140‑2
                                    TACAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCAACCAAat    <  2:281651/140‑3
                                      CAAGCAGAGGGTCGGCGGTTCGATCCCGTCATCCTCCACCATAAACACTTTTTAACGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAATCCTGCCCCCGCAACCAAatta  <  1:72957/140‑5
                                                                               |||||||||||||||                                                                                    
AGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2521170‑2521248
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAA  >  NC_000913/2947495‑2947578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.