New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3363001 = | 126 (1.360) | 113 (1.220) | 63/274 | 0.2 | 64.0% | coding (195/2382 nt) | yhcD | putative fimbrial usher protein YhcD |
? | NC_000913 | 3766087 = | 2 (0.020) | coding (3905/4134 nt) | rhsA | rhs element protein RhsA |
Only 100 of 119 total aligned reads displayed.
ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3363140‑3363001 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA > NC_000913/3766087‑3766225 ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT < 2:1186297/140‑1 ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT < 1:738095/140‑1 ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT > 1:593316/1‑140 ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT < 2:1152500/140‑1 CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTT < 2:1030241/140‑1 CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTT < 1:363877/140‑1 CAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTT < 1:669532/140‑1 AATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTA < 1:996210/140‑1 ATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAG < 2:903235/140‑1 TATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGA > 1:1498705/1‑140 ATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGAT < 2:1476326/140‑1 ATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATAT < 1:577924/140‑1 AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAA > 2:210329/1‑140 AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAA > 2:80344/1‑140 AGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAA > 2:927786/1‑140 GTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAAC < 2:1498705/140‑1 TCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATATCA > 1:1420201/1‑140 TCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACA > 1:322587/1‑140 CGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAA < 2:683611/140‑1 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 2:1483070/1‑140 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 1:298529/1‑140 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 1:796873/1‑140 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 1:1099718/1‑140 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 1:18316/1‑140 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 2:566033/1‑140 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 2:685718/1‑140 TAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATG > 2:22562/1‑140 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGAT > 2:1112259/1‑140 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGAT > 1:750905/1‑140 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGAT > 2:1108143/1‑140 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATA > 2:182194/1‑132 ACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATA < 1:182194/132‑1 GCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGC < 2:139999/140‑1 CTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAA < 2:589199/140‑1 CTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAA < 2:550854/140‑1 AGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGC < 2:578669/140‑1 GGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA < 1:685718/140‑1 GGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCA < 1:20598/140‑1 AATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGA < 2:58757/140‑1 ATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGAC < 2:119312/140‑1 TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC < 1:80344/140‑1 TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC < 2:1099718/140‑1 TTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACAC < 2:675159/140‑1 TTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATATCAATGATAGCTTCTCGTGGAAATGTTGCAGACACA < 2:1420201/140‑1 TTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACA < 1:1034256/140‑1 TAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGG < 2:1397911/140‑1 AAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGG < 2:750905/140‑1 TTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGA < 2:288719/140‑1 TTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGA < 2:9951/140‑1 GTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATC < 2:304107/140‑1 TGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGT < 1:1487670/140‑1 CAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGT > 1:1268743/1‑140 CCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACA > 1:945764/1‑140 CCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACA > 1:482138/1‑140 CCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATC < 2:678087/128‑1 CCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATC > 1:678087/1‑128 TGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATA < 2:667061/140‑1 CAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAA < 1:1483070/140‑1 GACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATG > 2:1523067/1‑140 ACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAGTAAATGA > 2:1334541/1‑140 CAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC < 1:1239390/140‑1 CAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC < 2:482138/140‑1 CAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC < 2:945764/140‑1 ATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA > 2:1396489/1‑140 ATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGA < 1:1108143/140‑1 GCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG > 2:7695/1‑140 GCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGAC < 2:578023/132‑1 CCATTTTCATCAAAGCGCGTAGCAATGTTGCCTTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTG > 2:207160/1‑140 TTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGT > 1:1201006/1‑140 TTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTG > 1:104743/1‑140 TCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGAT > 2:1546225/1‑140 CAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGA > 1:519470/1‑140 AGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAA < 2:750555/140‑1 CGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAA > 2:275471/1‑140 CGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACC > 1:1066410/1‑140 GTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCC < 2:1297971/140‑1 AGCAATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGA < 1:1546225/140‑1 AATGTTGCC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAG < 1:996833/140‑1 ATGTTGCCTTTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAG < 1:207160/140‑1 CC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGAC > 1:524634/1‑140 CC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAA > 1:788647/1‑123 CC‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAA < 2:788647/123‑1 C‑TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACG < 1:1063627/140‑1 TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGT < 2:1092936/140‑1 TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGT < 2:1268743/140‑1 TTTTTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGT < 1:1462634/140‑1 TTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACT > 2:1462185/1‑140 TTTTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACT > 2:97271/1‑140 TTTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTC > 1:1266225/1‑140 TTCGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCA < 1:575724/140‑1 cggccaTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG < 2:18316/134‑1 CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG < 1:1218470/140‑1 CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG < 2:1201006/140‑1 CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG < 1:778818/140‑1 CGCCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGG < 1:275471/140‑1 CCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAA < 1:972979/140‑1 CCATTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAA < 1:163860/140‑1 TTTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTA < 1:588847/140‑1 TTACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAA > 2:483161/1‑140 TACTTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAAT < 1:270682/140‑1 ACAATATATAGTCGTAACAGCCATTTTTTTCTTCAGAAGGAATTTTTAAACCGGCTTGTTGCAGAAATGCCTGATCAAGACAAATGTCGCCATTTTCATCAAAGCGCGTAGCAATGTTGCC‑TTTTTTTTCGCCATTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3363140‑3363001 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGA > NC_000913/3766087‑3766225 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |