Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	29,496	0	T	A	27.6%	123.6 / 28.7	58	intergenic (+301/‑155)	dapB/carA	4‑hydroxy‑tetrahydrodipicolinate reductase/carbamoyl phosphate synthetase subunit alpha
Reads supporting (aligned to +/- strand):  ref base T (39/3);  new base A (0/16);  total (39/19)
Fisher's exact test for biased strand distribution p-value = 1.21e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAAT  >  NC_000913/29366‑29633                                                                                                                                     |                                                                                                                                          tttGGTCCTTTTTTTTCTGCTCTTTTTTTTTTCATGCATTCTTCTTGCGGCGCAAGTGTTTCCCAGAACAGG‑TT‑AGATGTTTTTTTTGTCTTTTAATCCCTGAAAAACATGCATGAGCCAAAAAATAATATAAAAAATcc                                                                                                                                  <  2:799766/140‑1 (MQ=255)  ttGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                 >  1:799766/1‑140 (MQ=255)  ttGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                 >  2:239510/1‑140 (MQ=255)           ttttttCTGCTTTTTTTTTTTTCATGCATTTTTCTTGCTGCGCAAGCTTTTCCCAAAACAGG‑TA‑AGATGTTTTTTTTGTCGCTTAATCCCTAAAAAACTTGCATGACCCAAAAAATAAAAAAAAAAATCCCGCCATTAAg                                                                                                                        <  2:186868/140‑1 (MQ=255)             ttttCTGCTCTTTTTTTTTTCATGAAATCTTCTTGCGGCGCAAGC‑TTTTCCAAAAAAGGTTT‑AGATTTTTTTTTTGTCGCTTAATGCCTAAAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGtt                                                                                                                      <  2:1342093/140‑1 (MQ=255)               ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGa                                                                                                                    >  1:186868/1‑140 (MQ=255)               ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGa                                                                                                                    >  2:1041015/1‑140 (MQ=255)                    cTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                               >  2:1294929/1‑140 (MQ=255)                      ttttttttttTCATGCAATCTTCTTGCGGCGCAAGCTTTTCCAAAAACAGT‑TT‑AGATGTTTTTTTTGTCGCTTAATGCCTAAAAAACATGCATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAg                                                                                                             <  2:1137550/138‑1 (MQ=255)                        tttttATTTCATGCATTCTTCTTGCTGCGCAAGCTTTTTCCAAAACAGG‑TT‑AGATGATTTTTTTGTCGCTTAATGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAgcg                                                                                                           <  1:936133/140‑1 (MQ=255)                         ttttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAgcgc                                                                                                          >  1:1137550/1‑140 (MQ=255)                          ttttttTCATGCATTCTTCTTGCTGCGAAAGCTTTTTCAAAAACAGG‑TT‑AGATGATTTTTTTGTCGTTTAATGCCTAAAAAACATGCATGAGCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                         <  2:225164/140‑1 (MQ=255)                          ttttttTCATGCATTCTTCTGGCGGCGAAAGCTTTTCCAAAAACAGT‑TT‑AGATGTTTTTTTTGTCGTTTAATCCCTGAAAAACATGAATGAGCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                         <  2:1319328/140‑1 (MQ=255)                             ttttCATCCATTTTTCTTGCGGCGAAGGCTTTTCAAAAAACGGT‑TT‑AGATTTTTTTTTTGTCGTTTAATGCCTAAAAAACTTGCATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                      <  2:1045772/139‑1 (MQ=255)                             ttttCATCAATTCTTCTTGCTGCGCAAGCTTTTCCAAAAACAGG‑TT‑AAATTTTTTTTTTGTCGCTTAATCCTTAAAAAACATGAAGGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                      <  2:906387/139‑1 (MQ=255)                             ttttAATGTATTCTTCTGGCTGCG‑AAGGCTTTTCCAAAACAAG‑TTAAGATATTCTTTTTCTTTCTTAATGCCTTAAAAACTGGCAAACGCCAAAAAATAAAAAAAAAAAGCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                      <  2:1121923/139‑1 (MQ=255)                             ttttAATGAATTCTTCTGGCTGCGAAAGCTTTTTCAAAAAAGGG‑TT‑AGATTTTTTTTTTTTCGTTAAATGCCTGAAAAACATGCATGCGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCat                                                                                                      <  2:538177/139‑1 (MQ=255)                                   tGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                >  1:906387/1‑140 (MQ=255)                                   tGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                >  1:86610/1‑140 (MQ=255)                                   tGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                >  2:215057/1‑140 (MQ=255)                                   tGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                >  1:1390728/1‑140 (MQ=255)                                   tGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                >  1:1319328/1‑140 (MQ=255)                                   tGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                >  1:1301683/1‑140 (MQ=255)                                   tGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                >  1:1001168/1‑140 (MQ=255)                                        tcttctTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtctctgtctc                                                                                           >  1:488864/1‑134 (MQ=255)                                        tcttctTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                           >  2:1249291/1‑140 (MQ=255)                                                ttgcGCACGCTTTTCCAAAAACAGT‑TT‑ATATATTTTTTTTGTCGCTTAATGCCTAAAAAACATGCAGGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGt                                                                                   <  2:691695/139‑1 (MQ=255)                                                cggcgcAAGCGTTTCCCAAAACAGG‑TT‑AGATGATTTTTTTGTCGCTTAATGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGt                                                                                   <  1:819516/138‑1 (MQ=255)                                                  gcgcAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                 >  1:691695/1‑140 (MQ=255)                                                     cAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAACGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                              >  1:1118749/1‑140 (MQ=255)                                                                 acagcAGT‑TT‑AAATGTTTTTTTTGCCTCTTAATCCCTAAAAAACATGCAGGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtcg                                                                  <  2:953956/136‑1 (MQ=255)                                                                 aaaaaaGG‑TT‑AGATTTTTTTTTTGTCGTTTAATGCCTGAAAAACATGCATGACCAAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtcg                                                                  <  2:374979/135‑1 (MQ=255)                                                                   aaCAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGt                                                                >  2:218104/1‑140 (MQ=255)                                                                      ggg‑TT‑AGATTATTTTTTTGTCTTTTAATCCCTAAAAAACATGCATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAg                                                             <  2:1301683/139‑1 (MQ=255)                                                                        g‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                           >  1:1406077/1‑140 (MQ=255)                                                                        g‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                           >  2:102967/1‑140 (MQ=255)                                                                        g‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                           >  1:53960/1‑140 (MQ=255)                                                                        g‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                           >  1:468747/1‑140 (MQ=255)                                                                               atgatCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                      >  1:394021/1‑140 (MQ=255)                                                                                 tatttttttGTCATTTACTACCTAAAAAAAATCAATAACCCAAAAAAAAATAAAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGc                                                    <  2:1118749/136‑1 (MQ=255)                                                                                 tatttttttGCCGTTTATTCCCTAAAAAATATTCGTGGGCAACAAAATATGAAAAAAAGTGCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGc                                                    <  2:1406077/136‑1 (MQ=255)                                                                                 attttttttGTCGCTTAATGCCTAAAAAACATGCAGGACCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGc                                                    <  2:1326962/136‑1 (MQ=255)                                                                                  ttttttttGTCGTTAAATCCCTAAAAAACATGCATGACCAAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCa                                                   <  2:831713/137‑1 (MQ=255)                                                                                  atCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttctgt                                                   >  1:953956/1‑136 (MQ=255)                                                                                  atCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCa                                                   >  1:76888/1‑140 (MQ=255)                                                                                    cTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                 >  2:855015/1‑140 (MQ=255)                                                                                    cTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                 >  1:307082/1‑140 (MQ=255)                                                                                    cTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                 >  1:1051701/1‑140 (MQ=255)                                                                                    cTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                 >  2:517910/1‑140 (MQ=255)                                                                                                 aaTGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatc                                    >  1:1376974/1‑140 (MQ=255)                                                                                                    ccatatAAACCATGCATGAACCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                 <  2:330842/135‑1 (MQ=255)                                                                                                     cttGTAAAACATGAATGAGCCAAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtg                                <  1:195559/138‑1 (MQ=255)                                                                                                         tAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTTGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGaa                            >  1:777873/1‑140 (MQ=255)                                                                                                         tAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGaa                            >  2:943618/1‑140 (MQ=255)                                                                                                         tAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGaa                            >  1:1243396/1‑140 (MQ=255)                                                                                                             aCATGCATGAGCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTaa                        <  1:1041015/140‑1 (MQ=255)                                                                                                               atgcaggACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata                      <  2:1390728/140‑1 (MQ=255)                                                                                                                 gcatgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                    >  2:924964/1‑140 (MQ=255)                                                                                                                 gcatgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                    >  2:1026991/1‑140 (MQ=255)                                                                                                                   atgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                  >  1:306475/1‑140 (MQ=255)                                                                                                                         cacaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa            <  1:102967/140‑1 (MQ=255)                                                                                                                         caaaaaaTAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa            <  2:468747/137‑1 (MQ=255)                                                                                                                          acaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAag           >  1:270995/1‑140 (MQ=255)                                                                                                                          aaaaaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAag           <  1:239510/138‑1 (MQ=255)                                                                                                                           caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagc          >  1:242881/1‑139 (MQ=255)                                                                                                                           aaaaaaaaaaaaaaaACCCCCGCCATTAAGTTGACTTTTAGTGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagt          <  2:1376974/139‑1 (MQ=255)                                                                                                                            aaaaaaATAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTTGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg         <  2:777873/140‑1 (MQ=255)                                                                                                                            aaaaaaATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg         <  2:71852/140‑1 (MQ=255)                                                                                                                            aaaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg         >  1:249450/1‑140 (MQ=255)                                                                                                                               ataataTAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagt      <  1:1294929/140‑1 (MQ=255)                                                                                                                                  atatAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGaa   >  2:1214025/1‑140 (MQ=255)                                                                                                                                   tataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat  >  2:409752/1‑140 (MQ=255)                                                                                                                                     |                                                                                                                                          TTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGG‑TT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAAT  >  NC_000913/29366‑29633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑