| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,628,649 | 0 | A | C | 26.2% | 134.3 / 12.5 | 65 | intergenic (+102/+206) | nadR/ettA | DNA‑binding transcriptional repressor/NMN adenylyltransferase NadR/energy‑dependent translational throttle protein EttA |
| Reads supporting (aligned to +/- strand): ref base A (38/10); new base C (0/17); total (38/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.52e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628515‑4628788 | cTGGTGCGGGAGATGATGGGGGGGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGc < 1:429147/140‑1 (MQ=255)cTGGTGAGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGc < 1:312858/140‑1 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTg > 2:939630/1‑136 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTg < 1:939630/136‑1 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACg > 1:243426/1‑140 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACg > 2:184073/1‑140 (MQ=255) gTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACg > 2:1073695/1‑140 (MQ=255) ggAGATGATGGGGGAGCAGAGATAACCGAGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCa < 1:1228012/133‑1 (MQ=255) ggAGATGATGGGGGAGCAGAGATAACCGAGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCa > 2:1228012/1‑133 (MQ=255) atgatgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCg > 1:702812/1‑140 (MQ=255) gatgGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGcc > 1:450924/1‑140 (MQ=255) gAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAAt > 2:1221919/1‑140 (MQ=255) aGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAAtt > 2:1353656/1‑140 (MQ=255) aGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAAtt > 2:1043363/1‑140 (MQ=255) agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAC‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAg < 2:672234/140‑1 (MQ=255) agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAg < 1:674619/140‑1 (MQ=255) agagATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGCCCCGCCACGAAATTGAg < 2:243426/140‑1 (MQ=255) aTAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATg > 2:1416091/1‑140 (MQ=255) aTAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATg > 1:223488/1‑140 (MQ=255) acccGTGATAAAACTGCTCAAAGGGGGGGTATAAAATGAGTTTTTTTGATGAGTTGAAAC‑CCTCTCGGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCt < 2:450924/138‑1 (MQ=255) ccGTGATAAAACTGCTAAAAGGCGAGGTATAAAATGATTTTTTTTGATGAGTTGAAAC‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAAC‑CCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTaa < 2:223488/140‑1 (MQ=255) gTGATGAAACTGCTCAAGGGCGAGGTATAAAATGAGTTTTTTTGAGGAGTTAAAAA‑CCTCTCTGGAAGAGGCTGTGGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAgg < 1:1449926/140‑1 (MQ=255) gTGATGAAACTGCTCAAAGGGGGGGTATAAAATGATTTTTTTTGATGAGTAAAAAC‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAAC‑CCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAgg < 2:1008550/140‑1 (MQ=255) gTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGTTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAgg < 1:1004353/140‑1 (MQ=255) gTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAAC‑CCTGCCCGGGTGCCCCGCCACGAAATTGAGGATGCTAAgg < 2:970703/140‑1 (MQ=255) gTGATAAAACTGATCAAAGGCGAGGTATAAAATGAATTTTTTTGATGAGTAAAAAA‑CCCCTAAGAAAGGGGCTGCCAATA‑TAAACAGGGTTTAAAAAAATCCTGCAGGGATGTTCCGCCACGAAATTGAGGATGCTAAgg < 2:463757/140‑1 (MQ=255) gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt > 2:161777/1‑140 (MQ=255) gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt > 2:828456/1‑140 (MQ=255) gatgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCt > 1:159653/1‑140 (MQ=255) atgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtg > 1:231885/1‑140 (MQ=255) atgaAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCtg > 1:1348413/1‑140 (MQ=255) aCTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTa > 2:361145/1‑140 (MQ=255) ctaaaaGGGGAGTTATAAAATGATTTTTTTTGATGAGTTAAAAC‑CCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGGTTGAAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGAcc < 2:714636/137‑1 (MQ=255) aaaaGGGGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAC‑CCTCTCTGGAAGAGGCTGTCGAGATAAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCgg < 1:438681/139‑1 (MQ=255) aGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGgtg > 2:21136/1‑140 (MQ=255) aGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGgtg > 2:76756/1‑140 (MQ=255) aGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGgtg > 1:92349/1‑140 (MQ=255) tataAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTc > 1:1312380/1‑140 (MQ=255) aGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt > 1:566986/1‑140 (MQ=255) aGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt > 1:1138891/1‑140 (MQ=255) aGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCAt > 1:56662/1‑140 (MQ=255) ttGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCC‑CCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt < 1:1083182/140‑1 (MQ=255) tgatgaGTTAAAAC‑CCTCTTGGGAAGAGGCTGTCGAGATAAAACAAGGTTTAAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCAtt < 1:184073/140‑1 (MQ=255) tgaGTTAAAAC‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTAAAAAAC‑CCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 1:161777/140‑1 (MQ=255) ggaGTTAAAAC‑CCTCTCGGGAAGGGGCTGTGGAGATAAAACAAGGTTTAAAAAAC‑CCTGCGGGGGGGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCgg < 2:159653/139‑1 (MQ=255) gattGAAAACCCTCTCGGGAAGAGGCTGTCGAAATAAAAAAAGTTTTGAAAAAC‑CCGGCCCGGTTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGt < 2:702812/138‑1 (MQ=255) ttGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCt > 2:1108023/1‑140 (MQ=255) ttGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCt > 1:276597/1‑140 (MQ=255) ccTCTCGGAAAGAGGCTGTCGAGATAAAACAAGTTTTAAAAAAC‑CCTGCCCGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGcc < 1:1043363/140‑1 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 2:738966/1‑140 (MQ=255) ctctGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGa > 1:1434633/1‑140 (MQ=255) gagGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGc > 2:222547/1‑140 (MQ=255) ggCTGTGAAGATTAAACAAGGTTTAAAAAAA‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCgccacgt < 1:1448459/140‑7 (MQ=25) gCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTa > 2:456504/1‑140 (MQ=255) ttGTCGAAATTAAACAAGTTTTAAAAAAC‑CCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc < 1:828456/139‑1 (MQ=38) cTGTCGAGATTAAACAAGGTTTGAAAAAC‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAc < 1:76756/140‑1 (MQ=255) tGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTAcc > 2:1029015/1‑140 (MQ=255) tCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgc > 2:228689/1‑140 (MQ=255) cGAGATAAAACAGGTTTTAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACcgcg < 2:1138891/140‑1 (MQ=38) gagaTAAAAAAAGGTTTAAAAAAC‑CCGGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 2:1348413/140‑1 (MQ=38) gaaataaaaCAGGTTTTAAAAAAC‑CCTGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 2:92349/134‑1 (MQ=38) gaaatAAAAAAGGTTTAAAAAAACCCGGCGGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 2:1312380/136‑1 (MQ=37) gaaatAAAAAAGGTTTAAAAAAACCCGGCGGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGt < 2:276597/136‑1 (MQ=37) ataaaaCAAGTTTTAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCtt < 1:1073695/137‑1 (MQ=38) aaaaaaGGTTTTAAAAAACCCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTAt < 1:1067349/140‑1 (MQ=38) aaaCAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATc > 2:1188955/1‑140 (MQ=255) ggTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCt > 2:294801/1‑140 (MQ=255) ttttAAAAAAC‑CCTGCACGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 2:56662/139‑1 (MQ=255) ttttAAAAAAC‑CCGGCAGGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 2:367905/139‑1 (MQ=255) gTTTAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTa < 1:1221919/140‑1 (MQ=255) tttAAAAAAC‑CCTGCAGGGGTGCCCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTAc < 2:670871/140‑1 (MQ=255) ttaaaaaac‑CCCGCGCGGGTTACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACa < 1:361145/137‑1 (MQ=37) tGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAg > 1:106522/1‑140 (MQ=255) gAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGt > 1:1306080/1‑140 (MQ=255) gAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGt > 1:1403707/1‑140 (MQ=255) aaaaaa‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGtt > 1:1504863/1‑140 (MQ=255) a‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:1029015/140‑1 (MQ=255) a‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:1188955/140‑1 (MQ=255) a‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACa < 1:222547/140‑1 (MQ=255) | CTGGTGCGGGAGATGATGGGGGAGCAGAGATAACCGTGATGAAACTGCTCAAAGGCGAGGTATAAAATGAGTTTTTTTGATGAGTTGAAAA‑CCTCTCTGGAAGAGGCTGTCGAGATTAAACAAGGTTTGAAAAAA‑CCTGCACGGGTGACCCGCCACGAAATTGAGGATGCTAAGGCTGTTGTAGACCGGAAACGGTGTTCACGCCGCATCCGGCATTCGGTGCTCAATGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACAGTTTTACA > NC_000913/4628515‑4628788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |