BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	554,995	A→T	I129F (ATC→TTC)	cysS →	cysteine‑‑tRNA ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	554,995	0	A	T	100.0%	379.8 / NA	106	I129F (ATC→TTC)	cysS	cysteine‑‑tRNA ligase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (54/52); total (54/52)

Only 100 of 108 total aligned reads displayed.

GCTTTGTGGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGA  >  NC_000913/554861‑555131

gCTTTGTGGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGcc                                                                                                                                     <  1:1498538/140‑1 (MQ=255)

      tgGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGt                                                                                                                               <  1:1396543/140‑1 (MQ=255)

      tgGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGt                                                                                                                               <  1:1227616/140‑1 (MQ=255)

           aTGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCa                                                                                                                                    <  2:919045/130‑1 (MQ=255)

           aTGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCa                                                                                                                                    >  1:919045/1‑130 (MQ=255)

           aTGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGc                                                                                                                          <  1:1485566/140‑1 (MQ=255)

                 gATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTAtgt                                                                                                                    <  2:906448/140‑1 (MQ=255)

                    cGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGc                                                                                                                 >  1:242192/1‑140 (MQ=255)

                      cATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCgg                                                                                                               >  1:492909/1‑140 (MQ=255)

                      cATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCgg                                                                                                               >  1:497060/1‑140 (MQ=255)

                      cATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCgg                                                                                                               >  1:1426332/1‑140 (MQ=255)

                       aTGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGa                                                                                                              <  1:336773/140‑1 (MQ=255)

                        tGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGAc                                                                                                             >  2:131716/1‑140 (MQ=255)

                        tGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGAc                                                                                                             >  1:976581/1‑140 (MQ=255)

                           tCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACaa                                                                                                           <  2:1291439/139‑1 (MQ=255)

                           tCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACaa                                                                                                           >  1:1291439/1‑139 (MQ=255)

                            cGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGTACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACg                                                                                                         >  2:573140/1‑140 (MQ=255)

                            cGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACg                                                                                                         >  2:1299472/1‑140 (MQ=255)

                            cGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACg                                                                                                         <  2:1238622/140‑1 (MQ=255)

                            cGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACg                                                                                                         >  2:1171742/1‑140 (MQ=255)

                            cGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACg                                                                                                         <  1:251401/140‑1 (MQ=255)

                              ccGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGc                                                                                                       >  2:1116368/1‑140 (MQ=255)

                               cGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCg                                                                                                      >  2:781860/1‑140 (MQ=255)

                                 aaaTGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGAc                                                                                                    <  2:242192/140‑1 (MQ=255)

                                  aaTGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACg                                                                                                   <  1:1299472/140‑1 (MQ=255)

                                  aaTGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACg                                                                                                   <  1:911199/140‑1 (MQ=255)

                                  aaTGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACg                                                                                                   <  2:610826/140‑1 (MQ=255)

                                      cacaAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCg                                                                                                                <  2:1128570/123‑1 (MQ=255)

                                      cacaAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCg                                                                                                                >  1:1128570/1‑123 (MQ=255)

                                                ttGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTc                                                                                     <  1:1163425/140‑1 (MQ=255)

                                                  gATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTcga                                                                                   <  1:1094646/140‑3 (MQ=255)

                                                     gCTTTGATCATTCTGCGCCCCGATATGGGGCCGCGCGCGACGCACCATATCGCCCAAATTATTGCACTCACTGAACACCTGTTCGCCAAAGGTCACCCTTATGTGGCGGCCAACGGCCCCGTAATGTCCGACGTCccgac                                                                                <  2:860020/140‑1 (MQ=255)

                                                     gCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgac                                                                                <  2:1213250/140‑1 (MQ=255)

                                                     gCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgac                                                                                <  1:1327141/140‑1 (MQ=255)

                                                       tttGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgaccg                                                                              >  1:1044307/1‑140 (MQ=255)

                                                       tttGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgaccg                                                                              >  1:1248084/1‑140 (MQ=255)

                                                       tttGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgac                                                                                <  2:1170124/138‑1 (MQ=255)

                                                       tttGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgac                                                                                >  1:1170124/1‑138 (MQ=255)

                                                        ttGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgaccga                                                                             >  1:440698/1‑140 (MQ=255)

                                                         tGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGAt                                                                            <  2:976581/140‑1 (MQ=255)

                                                         tGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGAt                                                                            >  2:1355831/1‑140 (MQ=255)

                                                           aaCATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATcc                                                                          >  1:617664/1‑140 (MQ=255)

                                                                tCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACtt                                                                     >  1:1464476/1‑140 (MQ=255)

                                                                  tGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTAt                                                                   >  1:35736/1‑140 (MQ=255)

                                                                     gcCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgac                                                                                >  1:561061/1‑124 (MQ=255)

                                                                     gcCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCccgac                                                                                <  2:561061/124‑1 (MQ=255)

                                                                     gcCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGc                                                                >  2:1399191/1‑140 (MQ=255)

                                                                     gcCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGc                                                                >  2:705767/1‑140 (MQ=255)

                                                                        cGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTg                                                             <  1:628638/140‑1 (MQ=255)

                                                                        cGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTg                                                             <  2:1426332/140‑1 (MQ=255)

                                                                        cGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTg                                                             <  2:497060/140‑1 (MQ=255)

                                                                          gATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCt                                                           <  1:1355831/140‑1 (MQ=255)

                                                                          gATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCt                                                           <  2:268547/140‑1 (MQ=255)

                                                                            tatGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGt                                                         <  1:731286/140‑1 (MQ=255)

                                                                            tatGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGt                                                         <  1:214086/140‑1 (MQ=255)

                                                                            tatGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGt                                                         <  1:94159/140‑1 (MQ=255)

                                                                              tGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTcg                                                       <  2:1396071/140‑1 (MQ=255)

                                                                                   ccGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCa                                                  >  1:634983/1‑140 (MQ=255)

                                                                                     gcgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAgg                                                >  2:514707/1‑140 (MQ=255)

                                                                                     gcgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAgg                                                >  1:835708/1‑140 (MQ=255)

                                                                                     gcgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAgg                                                >  1:1447734/1‑140 (MQ=255)

                                                                                     gcgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAgg                                                >  1:1122898/1‑140 (MQ=255)

                                                                                      cgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTc                                                        >  1:65245/1‑131 (MQ=255)

                                                                                      cgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTc                                                        <  2:65245/131‑1 (MQ=255)

                                                                                      cgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGa                                               >  2:470378/1‑140 (MQ=255)

                                                                                      cgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGa                                               <  1:131716/140‑1 (MQ=255)

                                                                                      cgcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGa                                               >  2:536412/1‑140 (MQ=255)

                                                                                       gcgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGAt                                              <  2:415585/140‑1 (MQ=255)

                                                                                        cgcgACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGAtc                                             >  2:1176678/1‑140 (MQ=255)

                                                                                             cGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGAc                                        <  1:83937/140‑1 (MQ=255)

                                                                                             cGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGAc                                        <  1:462296/140‑1 (MQ=255)

                                                                                             cGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGAc                                        <  2:835708/140‑1 (MQ=255)

                                                                                             cGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGAc                                        <  2:1047857/140‑1 (MQ=255)

                                                                                             cGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGAc                                        <  2:1311277/140‑1 (MQ=255)

                                                                                             cGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGAc                                        <  1:1399191/140‑1 (MQ=255)

                                                                                              gCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGccc                                       <  2:440698/140‑1 (MQ=255)

                                                                                                aCCATATCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAg                                     <  2:617664/140‑1 (MQ=255)

                                                                                                   atatCGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTg                                  >  2:1256092/1‑140 (MQ=255)

                                                                                                       cGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTgcagg                              >  1:720337/1‑140 (MQ=255)

                                                                                                       cGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTgcagg                              >  2:880799/1‑140 (MQ=255)

                                                                                                       cGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTgcagg                              >  1:1200675/1‑140 (MQ=255)

                                                                                                       cGCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTgcagg                              >  1:1108087/1‑140 (MQ=255)

                                                                                                        gCAGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTgcaggc                             <  1:838492/140‑1 (MQ=255)

                                                                                                          aGAAATTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTgcaggcag                           >  2:1057849/1‑140 (MQ=255)

                                                                                                            aaaTTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCaggcaggc                         >  1:495279/1‑140 (MQ=255)

                                                                                                            aaaTTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCaggcaggc                         >  2:1201351/1‑140 (MQ=255)

                                                                                                            aaaTTATTGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCaggcaggc                         >  2:763077/1‑140 (MQ=255)

                                                                                                                 attGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCaggcaggc                         <  2:627906/135‑1 (MQ=255)

                                                                                                                 attGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCaggcaggc                         <  2:197701/135‑1 (MQ=255)

                                                                                                                 attGAACTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCaggcaggc                         >  1:627906/1‑135 (MQ=255)

                                                                                                                      aCTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGgcgc                       <  2:1037470/132‑1 (MQ=255)

                                                                                                                      aCTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGgcgc                       >  1:1037470/1‑132 (MQ=255)

                                                                                                                      aCTCACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTg               >  1:640213/1‑140 (MQ=255)

                                                                                                                         cACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACg            <  1:781860/140‑1 (MQ=255)

                                                                                                                         cACTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACg            <  1:1142249/140‑1 (MQ=255)

                                                                                                                          aCTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGt           >  2:589478/1‑140 (MQ=255)

                                                                                                                          aCTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGt           >  1:27798/1‑140 (MQ=255)

                                                                                                                           cTGAACAACTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTg          >  1:1230917/1‑140 (MQ=255)

                                                                                                                               acaacTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTcg      <  2:1464476/140‑1 (MQ=255)

                                                                                                                                   cTGTTCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTcgacga  >  1:353184/1‑140 (MQ=255)

GCTTTGTGGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGA  >  NC_000913/554861‑555131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`