| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,633,923 | G→A | G101E (GGG→GAG) | pinQ → | Qin prophage; putative site‑specific recombinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,633,923 | 0 | G | A | 99.0% | 216.4 / ‑4.1 | 96 | G101E (GGG→GAG) | pinQ | Qin prophage; putative site‑specific recombinase |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (43/52); total (43/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
GCTTGCTCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGGGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTT > NC_000913/1633789‑1634058 | gcttgctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCa < 2:140731/140‑1 (MQ=14)gcttgctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCa < 1:1407569/140‑1 (MQ=14)gcttgctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCa < 1:1397669/140‑1 (MQ=14)gcttgctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCa < 1:1264351/140‑1 (MQ=14)gcttgctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCa < 1:1254966/140‑1 (MQ=14) ttgctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCAtt > 2:454993/1‑140 (MQ=17) ctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATtgac < 2:1366488/140‑1 (MQ=17) ctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATtgac < 2:457574/140‑1 (MQ=18) ctCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATtgac > 2:967003/1‑140 (MQ=17) cTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATtgacctgac < 2:981742/140‑1 (MQ=18) cTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATtgacctgac < 2:14119/140‑1 (MQ=18) cTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATtgacctgac < 2:188740/140‑1 (MQ=18) tggtgATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGGGGGCATTGACCTGACCAGTCCaa < 1:151237/140‑1 (MQ=32) tggtgATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCaa > 2:989753/1‑140 (MQ=17) tggtgATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCaa > 2:229079/1‑140 (MQ=17) tggtgATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCaa > 2:463989/1‑140 (MQ=17) ggtgATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAAc < 2:809158/140‑1 (MQ=18) gtgATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACa > 2:1075801/1‑140 (MQ=17) gtgATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACa < 2:670803/140‑1 (MQ=18) tgtgACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAatgatga < 1:785524/140‑1 (MQ=18) tgtgACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAatgatga < 1:669854/140‑1 (MQ=18) tgtgACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAatgatga > 2:683995/1‑140 (MQ=17) tgtgACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAatgatga > 1:1323932/1‑140 (MQ=17) tgACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAatgatgatg > 1:1315390/1‑140 (MQ=17) tgACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGG‑AAAATGATGATGc > 2:457352/1‑140 (MQ=12) cAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCaa < 2:415266/140‑1 (MQ=18) aaaCTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGt < 1:454993/140‑1 (MQ=18) ggATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAAttt > 1:747000/1‑140 (MQ=17) gATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTc > 2:1377544/1‑140 (MQ=17) ccTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTcagcag > 1:488552/1‑140 (MQ=17) ttGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTc > 2:926897/1‑140 (MQ=17) tGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCg < 1:787816/140‑1 (MQ=18) tGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCg < 2:277034/140‑1 (MQ=17) ggTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGc < 2:1315390/140‑1 (MQ=18) ggTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGc < 2:524510/140‑1 (MQ=18) gTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCt < 2:335145/140‑1 (MQ=17) gTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCt > 2:384159/1‑140 (MQ=17) tAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAAt < 1:1028664/140‑1 (MQ=17) tAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAAt < 1:1075801/140‑1 (MQ=17) cAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGaa < 1:683995/140‑1 (MQ=17) aaTGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAAc > 1:726511/1‑140 (MQ=17) aTGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCt > 2:1076099/1‑129 (MQ=17) aTGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCt < 1:1076099/129‑1 (MQ=17) aTGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACg < 2:1409774/140‑1 (MQ=17) tGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGGCCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACga < 1:764503/140‑1 (MQ=17) tGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACga < 1:384159/140‑1 (MQ=17) atCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCt < 1:989753/140‑1 (MQ=17) atCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCt < 1:918414/140‑1 (MQ=17) cAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCttt > 2:551874/1‑140 (MQ=17) gAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACga > 1:1459324/1‑130 (MQ=17) gAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACga < 2:1459324/130‑1 (MQ=17) aaaaCAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACt < 2:1323932/140‑1 (MQ=17) aaaCAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACtt > 2:999714/1‑140 (MQ=17) aactgTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTg > 1:818047/5‑140 (MQ=16) aaCAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTg > 1:462389/1‑140 (MQ=17) aGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAAc < 1:602366/140‑1 (MQ=17) gTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACg < 2:726511/140‑1 (MQ=17) tGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGc > 1:1220531/1‑140 (MQ=17) tGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGc > 2:940444/1‑140 (MQ=18) tGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGc > 2:1497154/1‑140 (MQ=17) ggAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCa > 2:1357237/1‑140 (MQ=18) gAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCAc > 2:1124381/1‑140 (MQ=18) aacaacTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACt < 1:463989/140‑1 (MQ=17) acTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCAtt < 1:926897/140‑1 (MQ=17) acTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCAtt < 1:229079/140‑1 (MQ=17) acTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCAtt < 1:365848/140‑1 (MQ=17) cTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTc < 1:967003/140‑1 (MQ=17) tGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTcc < 1:1377544/140‑1 (MQ=17) gACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCg > 2:342025/1‑140 (MQ=17) ccGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCAtt > 2:196059/1‑135 (MQ=18) ccGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCAtt < 1:196059/135‑1 (MQ=17) ccGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCggg > 2:1193101/1‑140 (MQ=18) ccGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCggg > 2:61231/1‑140 (MQ=18) cGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGa < 1:1193101/140‑1 (MQ=17) cGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGa < 1:61231/140‑1 (MQ=17) aaCAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAg < 1:1124381/140‑1 (MQ=17) aaCAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAg > 2:1402595/1‑140 (MQ=18) cAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTa > 2:984301/1‑140 (MQ=18) cAGGTATCAGAGTGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTa > 2:81868/1‑140 (MQ=18) tGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCgcggc < 2:462389/140‑1 (MQ=17) tGCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCgcggc < 1:999714/140‑1 (MQ=17) gCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCgcggcg < 1:551874/140‑1 (MQ=17) gCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCgcggcg < 2:1220531/140‑1 (MQ=17) gCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCgcggcg > 1:351021/1‑140 (MQ=18) gCATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCgcggcg < 1:1497154/140‑1 (MQ=17) cATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGgcgc > 2:541655/1‑140 (MQ=18) cATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGgcgc < 2:991700/140‑1 (MQ=17) cATTGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGgcgc > 1:991700/1‑140 (MQ=17) tGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAgg > 2:289952/1‑140 (MQ=18) tGCTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAgg > 1:741469/1‑140 (MQ=18) cTTAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGa > 1:351583/1‑140 (MQ=18) ttAGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTGCAGCAGTCGGTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCCGGATAGTAAGAGCCCGCGGCGCAGGGaa > 2:1463213/1‑140 (MQ=255) aGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCcg > 2:1068912/1‑126 (MQ=18) aGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCcg < 1:1068912/126‑1 (MQ=17) aGCATTGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAAc > 1:429068/1‑140 (MQ=18) ttGGAGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGttt < 2:741469/140‑1 (MQ=17) | GCTTGCTCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGGGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTT > NC_000913/1633789‑1634058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |