| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 646,747 | 0 | T | G | 22.1% | 164.5 / 36.8 | 77 | T255P (ACC→CCC) | citG | triphosphoribosyl‑dephospho‑CoA synthase |
| Reads supporting (aligned to +/- strand): ref base T (6/54); new base G (17/0); total (23/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.06e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAATTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA > NC_000913/646608‑646886 | aaaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGt < 1:515846/140‑1 (MQ=255) aaTTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGtt < 2:438546/140‑1 (MQ=255) tATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGaa < 1:455683/140‑1 (MQ=255) aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAt > 1:999347/1‑140 (MQ=255) aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAt > 2:1155514/1‑140 (MQ=255) aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAt < 1:279162/140‑1 (MQ=255) aTCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGCTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAt > 1:125605/1‑140 (MQ=255) cAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑Gc < 1:1155514/140‑1 (MQ=255) gTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑Gcccc < 1:117030/140‑1 (MQ=255) tGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑Gccccc > 1:1193854/1‑140 (MQ=255) gCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCt > 1:654059/1‑140 (MQ=255) gCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCt < 2:355070/140‑1 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGa < 2:901231/130‑1 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑Ggccccct > 2:1209029/1‑138 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGa > 1:901231/1‑130 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑Ggccccct > 2:916638/1‑138 (MQ=255) cTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCtt > 1:984646/1‑140 (MQ=255) ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCttt < 2:438234/140‑1 (MQ=255) ttAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCttt < 2:516121/140‑1 (MQ=255) atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCaat < 1:940111/140‑1 (MQ=255) atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCaat < 1:1161461/140‑1 (MQ=255) atTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GCCCCCctttttttat > 2:940111/1‑135 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑GCCCCCCTTTTTTAATAATtttttgc > 2:148112/1‑137 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGGCCCCCTTTTTTTAATAtttttttt > 2:1106826/1‑138 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GGCCCCCTTTTTTAATAATGtttttg > 2:819704/1‑137 (MQ=255) tgCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGGCCCAA‑GCCCCCCTTTTTCTATAATATTTacg > 1:771878/1‑140 (MQ=255) cTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGcc < 2:438513/140‑1 (MQ=255) aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc < 2:984646/140‑1 (MQ=255) aaaaaCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTc < 2:1019414/140‑1 (MQ=255) aCCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCgcgc < 1:1194693/140‑1 (MQ=255) cAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCTTTTTTCAATAATGTTTTTGCCCCGCCCtc > 1:458291/1‑139 (MQ=255) ggTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑GCCCCCCTTTTTCAATAAAGTTTTCGCCTCGCGCTGTa > 1:759742/1‑140 (MQ=255) tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc < 2:1193854/140‑1 (MQ=255) tAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc < 2:999347/140‑1 (MQ=255) agacagtCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGc < 1:1182007/134‑1 (MQ=255) aTCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgc‑g < 2:654059/140‑1 (MQ=255) tCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAgc‑gc < 2:572665/140‑1 (MQ=255) tCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GGCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCTGTAGCCAgc‑gc > 1:902224/1‑140 (MQ=255) cAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCa < 1:789772/140‑1 (MQ=255) cAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑GCCCCCCTTTTTCAATAAAGTTTTCGCCCCCCCCCGTGGCCAgc‑gcc > 2:833710/1‑139 (MQ=255) gTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAgg < 1:617528/140‑1 (MQ=255) aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGcc < 1:108926/140‑1 (MQ=255) aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGcc < 1:127516/140‑1 (MQ=255) aGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGcc < 1:1160433/140‑1 (MQ=255) gTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTCAATAAATTTTTCGCCCCGCCCTGTAGCCCGC‑GCCGGcccc > 2:1281244/1‑140 (MQ=255) tCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGATGGCCCCCTTTTTTC‑ATAATTTTTGTGCCCCGCGCTGTTGCCCAC‑GCAGGccccc > 2:127516/1‑140 (MQ=255) cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGcccccc < 1:1209029/140‑1 (MQ=255) cAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGCAT‑GTCCCCCTTTTTCAATAATGATTACGCCTCCCGCGGTAGCCCGC‑GCAGGcccccc > 2:699417/1‑140 (MQ=255) gCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGCGGGGGGTTGGAAG‑GCCCCCTTTTT‑TAATAATGTTTTTGCCCCCCGCCGTTGCCCGC‑GCAGGccccgtct > 2:1182007/1‑136 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCg < 1:1147109/140‑1 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATTTTTTTGCCCCGCCCCGTAGCCAGC‑GCCGGccccccccc > 2:662274/1‑137 (MQ=255) cACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGCGGGTTGAAT‑GCCCCCCTTTTTTTAAAAAATTTTTGCCCCCCCCCGTTGCCACC‑GCAGGccccccccc > 2:956983/1‑137 (MQ=255) cTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GCCCCCCTTTTTTAAAAATATTTTTGCCCCCCGCTGTTGCCAGC‑GCAGGgcccccccccc > 2:262795/1‑135 (MQ=255) cTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCGCCCCTTTTTCTATAATTTTTTTGCCTCCCGCTGTTGCCAGC‑GCAGGcgccccccccc > 2:884162/1‑135 (MQ=255) ccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GCCCCCCTTTTTCTATAATGTTTTTGCCTCGCGCCGTTGCCCGCGGCGGGccccccccccccc > 2:1257000/1‑133 (MQ=255) ccgccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCCTTTGCCATAATATTTTCGCCTCCCGCCGTAGCCACC‑GCCGGCCCCCCTCcccccc > 2:143207/1‑140 (MQ=255) gccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACcgc < 1:331865/140‑1 (MQ=255) ccTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACcgcg < 1:876772/140‑1 (MQ=255) tGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGAAT‑GCCCCCCTTTTTGAATAATTTTTTCGCCCCCCGCTGTAGCCAGC‑GCAGGGCCCCCCCCCCCCcccgcg > 1:489511/1‑140 (MQ=255) aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATg < 2:682924/140‑1 (MQ=255) aCTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATg < 1:148112/140‑1 (MQ=255) cTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGc < 2:98569/140‑1 (MQ=255) cTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGc < 2:337629/140‑1 (MQ=255) agaTTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAAc < 1:819704/140‑1 (MQ=255) gttcgATACACTCCCTGTCGAGCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCCGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTa < 2:869402/140‑1 (MQ=255) ttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTAt < 2:1210393/140‑1 (MQ=255) ttcgATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTAt < 2:910918/140‑1 (MQ=255) cTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGa < 1:77700/140‑1 (MQ=255) cccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTTAATAAAGTTTTCGCCTCGCGCCGTAGCCCGC‑GCAGGGCCCCCCCCCCACCCCCCGATGCAACGTTGGGTTCACCGTTGATc > 2:686081/1‑140 (MQ=255) ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCg < 1:1106826/140‑1 (MQ=255) ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCg < 1:143207/140‑1 (MQ=255) ccTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCACCGTTGATCg < 1:686081/140‑1 (MQ=255) cTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTTAATAATTTTTTTGCCCCCCGCTGTAGCCAGC‑GCCGGCCCCCCCCCCCCCCCCGCGGTGCCACGGTGGTATCGCCGTTGATCGc > 2:134921/1‑140 (MQ=255) tatCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCCCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGcc < 2:771878/138‑1 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTTGGAT‑GCCCCCCTTTTTTCATAATGTTTTCGCCCCCCGCCGTTGCCCGC‑GCAGGCCCCCCCCCCCCCCCCCCGGTGCCACGGTGGGATCGCCGTTGATCGccc > 2:1214869/1‑139 (MQ=255) gTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGGAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCTCCCGCTGTAGCCAGC‑GCAGGCCCCCCCCCCCCCCCCCCGATGCAACGGTGGTATCGCCGTTGGTCGccc > 2:711352/1‑139 (MQ=255) gAACTGCCGGAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTCAATAATGTTTTCGCCTCGCGCTGTAGCCAGC‑GCCGGCCCCCCCCCCCCCCCCGCGGTGCAACGTTGGGGTCGCCGGTGGTCGCCCTcc > 2:755722/1‑139 (MQ=255) aCTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGt < 1:794605/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg < 1:69586/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg < 2:902224/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg < 1:577896/140‑1 (MQ=255) tGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAg < 1:353223/140‑1 (MQ=255) cGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAg < 1:305699/140‑1 (MQ=255) ggAGATAATCGAGATCGGC‑GGGGGGTCGAAT‑GCCCCCCTTTTTTAATAAAGTTTTTGCCCCCCGCTGTAGCCCGC‑GCCGGCCCCCCCCCCCCCCCCCCGGTGCAACGTTGGTATCGCCCGTGATCGCCCTCAGTAggggg > 2:51430/1‑137 (MQ=255) gagaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa < 2:729054/140‑1 (MQ=255) gagaTAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCa < 1:1273320/140‑1 (MQ=255) aTCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt < 1:134921/140‑1 (MQ=255) aTCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTAt < 1:755722/140‑1 (MQ=255) tCGAGATCGGC‑GGGGGGTTGGAT‑GCCCCCCTTTTTTAATAATTTTTTCGCCCCCCGCTGTAGCCAGC‑GCAGGCCCCCCCCCCCCCCCCGCGGTGCCACGTTGGGATTGCCGGTGTTCGCCCTCCGTAGGAGGAAGGGATc > 2:6143/1‑140 (MQ=255) gaTCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGc < 2:489511/140‑1 (MQ=255) gaTCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGc < 1:1127737/140‑1 (MQ=255) gaTCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGc < 1:711352/140‑1 (MQ=255) aTCGGC‑TGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCa > 1:915936/1‑140 (MQ=255) gc‑ggGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGc < 1:884162/140‑1 (MQ=255) gTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTc < 1:1214869/140‑1 (MQ=255) ttCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCa < 2:113915/140‑1 (MQ=255) | AAATTTATCAAGTGCTTAAATAATTAAATCTGTGCTAAAAACCAGGTAAGGATCAGTAGGTCAGCACTGCCGCCTGGACTGAGATTTCGTTCGATACACTCCCTGTCGAACTGCCGGAGATAATCGAGATCGGC‑GGGGGTTCGAAT‑GCCCCCTTTTTGCAATAATGTTTGCGCCTCGCGCTGTAGCCAGC‑GCAGGCCCCCCTCGCCACCGCGCGATGCAACGTTGGTATCGCCGTTGATCGCCATCAGTAGGAGCAAGGTATCGAGCAATGCCAGTTCA > NC_000913/646608‑646886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |