Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,664,8960TG20.6% 152.8 / 13.4 63G169G (GGT→GGGyfhRputative peptidase
Reads supporting (aligned to +/- strand):  ref base T (15/35);  new base G (13/0);  total (28/35)
Fisher's exact test for biased strand distribution p-value = 3.58e-06
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGTCAGCC  >  NC_000913/2664758‑2665035
                                                                                                                                          |                                                                                                                                           
gTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTg                                                                                                                                            <  2:412312/140‑1 (MQ=255)
  cccAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTTTTGGTGTTATTGGTCGGGGTggg                                                                                                                                          >  2:884720/1‑138 (MQ=255)
   ccAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATc                                                                                                                                         >  1:557611/1‑140 (MQ=255)
     aGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGt                                                                                                                                       <  2:1150007/140‑1 (MQ=255)
        ccGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGaa                                                                                                                                    <  1:100865/140‑1 (MQ=255)
         cGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAg                                                                                                                                   >  2:78220/1‑140 (MQ=255)
            aTTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCa                                                                                                                                <  2:557611/140‑1 (MQ=255)
                        tACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGGAAATTCTTGCAGTTTTTGGTCGGGGTGATCGTGGAGGGATACGTGGGGTgg                                                                                                                    >  1:129/1‑139 (MQ=255)
                        tACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTTTCGATGTTCTTGTCCGGGGGGAACGCGAAGGCATACGGGCGGTgg                                                                                                                    >  2:1043736/1‑139 (MQ=255)
                        tACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGa                                                                                                                    >  1:1182428/1‑140 (MQ=255)
                        tACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGa                                                                                                                    >  2:106014/1‑140 (MQ=255)
                          cGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGGTGTTATTTGTCGGGGGGGTCGTGAAGGCATACGTGCGGTGATc                                                                                                                  >  2:1223733/1‑140 (MQ=255)
                          cGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGGTGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATc                                                                                                                  >  1:353143/1‑140 (MQ=255)
                            cAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCt                                                                                                                <  1:1223733/140‑1 (MQ=255)
                            cAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCt                                                                                                                <  1:722442/140‑1 (MQ=255)
                                 tGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCg                                                                                                                        <  1:1062657/127‑1 (MQ=255)
                                 tGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCg                                                                                                                        >  2:1062657/1‑127 (MQ=255)
                                  gCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTc                                                                                                          >  1:388220/1‑140 (MQ=255)
                                   ccATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTcc                                                                                                         >  1:836341/1‑140 (MQ=255)
                                            tggtgCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGcc                                                                                                <  2:622390/140‑1 (MQ=255)
                                             ggtgCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCct                                                                                               <  2:482412/140‑1 (MQ=255)
                                             ggtgCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCct                                                                                               >  1:482412/1‑140 (MQ=255)
                                              gtgCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCctc                                                                                              <  2:244144/140‑1 (MQ=255)
                                                 cgcCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGGGGATATTCTGGATGTTTTTGGTCGGGGGGGTCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCttt                                                                                           >  2:96017/1‑139 (MQ=255)
                                                 cgcCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGCAGAATCTGGCTGTTATTGGGTGGGGGGTTCCTGCAGGCATACGTGCGGTGAGGCTCGGCTCCTCATTTGCCTCTTa                                                                                           >  2:771504/1‑140 (MQ=255)
                                                 cgcCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTa                                                                                           >  1:1011980/1‑140 (MQ=255)
                                                  gcCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTTTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGcc                                                                                                >  2:1298460/1‑134 (MQ=255)
                                                  gcCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGcc                                                                                                <  1:1298460/134‑1 (MQ=255)
                                                    cATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGc                                                                                        >  1:1017722/1‑140 (MQ=255)
                                                           gTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATc                                                                                 <  1:1277710/140‑1 (MQ=255)
                                                             gATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGc                                                                               <  2:388220/140‑1 (MQ=255)
                                                             gATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGc                                                                               <  1:311150/140‑1 (MQ=255)
                                                              aTGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATg                                                                                         <  1:252233/129‑1 (MQ=255)
                                                              aTGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATg                                                                                         >  2:252233/1‑129 (MQ=255)
                                                                 tAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGGTGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGccaac                                                                           >  1:352998/1‑140 (MQ=255)
                                                                 tAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCaa                                                                                      <  2:1136723/129‑1 (MQ=255)
                                                                 tAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCaa                                                                                      >  1:1136723/1‑129 (MQ=255)
                                                                     cccACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCaaa                                                                       <  2:836341/140‑1 (MQ=255)
                                                                     cccACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCaaa                                                                       <  2:1182428/140‑1 (MQ=255)
                                                                     cccACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCaaa                                                                       <  2:1146679/140‑1 (MQ=255)
                                                                        acaACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGGTGTTATTTGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCCACTCCACATTTTCCTCTTATGCAAACATCGCCAACCAAATGa                                                                    >  2:661842/1‑140 (MQ=255)
                                                                        acaACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCaaa                                                                       <  1:325284/137‑1 (MQ=255)
                                                                        acaACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCaaa                                                                       >  2:325284/1‑137 (MQ=255)
                                                                        acaACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGa                                                                    >  1:985739/1‑140 (MQ=255)
                                                                             gTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATcccc                                                               <  1:323385/140‑1 (MQ=255)
                                                                               cTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCgg                                                             <  1:1043736/140‑1 (MQ=255)
                                                                                 ggTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCa                                                           <  2:1011980/140‑1 (MQ=255)
                                                                                 ggTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCa                                                           <  2:1017722/140‑1 (MQ=255)
                                                                                  gTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAg                                                          <  1:78220/140‑1 (MQ=255)
                                                                                   acaggTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGt                                                         <  1:1022898/136‑1 (MQ=255)
                                                                                       gTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCt                                                     <  1:106014/140‑1 (MQ=255)
                                                                                        ttCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCta                                                    <  1:168536/140‑1 (MQ=255)
                                                                                        ttCGGGCAGAGTATTGGCGGGGCGAAAATTTTGGGTGTTTTTGGTTGGGGGGGTTGTGGAGGCATACGTGCGGTGATCCTCGACTCCACATTTTTCTCTTATTCAACCACCGCCAACCAAAAGATCCCCGGCAGTGGCta                                                    >  2:168536/1‑140 (MQ=255)
                                                                                          cGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCtact                                                  <  1:771504/140‑1 (MQ=255)
                                                                                             gCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCtacttac                                               <  2:660698/140‑1 (MQ=255)
                                                                                             gCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCta                                                    <  2:956106/135‑1 (MQ=255)
                                                                                             gCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCta                                                    >  1:956106/1‑135 (MQ=255)
                                                                                                gagTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGGGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTacttacttt                                            >  1:12606/1‑139 (MQ=255)
                                                                                                  gTATTGGCGGGGCGGATATTCTGGATGTTTTTGGTGGGGGGGATCGGGAAGGGATACCCGCGGCGGTCCTCGCCCCCACATTTGCCTCTTATGCAACCACCGCCCACCCAATGATCCCCGGCAGCGGCtacttaccctgc                                          >  2:1022898/1‑135 (MQ=255)
                                                                                                  gTATTGGCGGGGCGAATATTCTGGGTGTTATTGGGCGGGGGGGTCGTGAAGGCATACGTGCGGGGATCCTCGACTCCACATTTTCCTCTTTTGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTtgat                                          >  2:822247/1‑140 (MQ=255)
                                                                                                  gTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTtgat                                          <  1:401214/140‑1 (MQ=255)
                                                                                                  gTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTtgat                                          >  1:68254/1‑140 (MQ=255)
                                                                                                  gTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGGGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTtgat                                          >  2:949660/1‑140 (MQ=255)
                                                                                                       ggCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGagag                                     >  1:833937/1‑140 (MQ=255)
                                                                                                             ggggatatTTTGGGTGTTTTTTGTGGGGGGGGTCGTGAAGGCATACGTGGGGGGATTCTCGACTCCCCATTTGCCTCTTATGCAACCATCGCCCACCAAAAGATCCCCGGCCGTGGCTACTTACTTTATGAGAGGTACAg                               >  2:718108/5‑140 (MQ=255)
                                                                                                                             ttATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATc               >  2:372936/1‑140 (MQ=255)
                                                                                                                              tATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCg              >  2:836445/1‑140 (MQ=255)
                                                                                                                               aTTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGc             <  2:985739/140‑1 (MQ=255)
                                                                                                                               aTTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGc             <  2:722450/140‑1 (MQ=255)
                                                                                                                                ttGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGcc            >  1:1056120/1‑140 (MQ=255)
                                                                                                                                    tCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCg        >  2:810052/1‑140 (MQ=255)
                                                                                                                                     cGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGt       >  1:792523/1‑140 (MQ=255)
                                                                                                                                       gggTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATTAGAGTTACAGCGGCGAAAATTATATCGCCAGc         <  1:478066/136‑1 (MQ=255)
                                                                                                                                       gggTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATTAGAGTTACAGCGGCGAAAATTATATCGCCAGc         >  2:478066/1‑136 (MQ=255)
                                                                                                                                        ggTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGTCAg    >  2:818183/1‑140 (MQ=255)
                                                                                                                                         gTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCATCCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGTCAGc   <  1:119236/140‑1 (MQ=255)
                                                                                                                                          tGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGTCAGcc  <  1:718108/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
GTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGTCAGCC  >  NC_000913/2664758‑2665035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: