BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,231,690	Δ1 bp	coding (26/2019 nt)	fadH →	2,4‑dienoyl‑CoA reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,231,687	0	C	.	100.0%	384.1 / NA	88	coding (23/2019 nt)	fadH	2,4‑dienoyl‑CoA reductase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (57/31); total (57/31)

TATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGCCCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCGTGG  >  NC_000913/3231549‑3231821

tATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGcc                                                                                                                                       >  2:335938/1‑140 (MQ=255)

tATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGcc                                                                                                                                       >  1:50996/1‑140 (MQ=255)

  ttCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGcccg                                                                                                                                     <  1:101514/140‑2 (MQ=255)

  ttCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGcccg                                                                                                                                     <  2:941438/140‑2 (MQ=255)

  ttCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGcccg                                                                                                                                     <  1:466833/140‑2 (MQ=255)

  ttCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGcccg                                                                                                                                     >  1:1132763/1‑139 (MQ=255)

       tttGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATAAGCTACCCTCCGCTGTTCG‑CCCGCTGGa                                                                                                                               >  1:167922/1‑140 (MQ=255)

             tCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAgg                                                                                                                         <  1:966200/140‑1 (MQ=255)

               ccATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGtt                                                                                                                       >  1:590748/1‑140 (MQ=255)

                 aTCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGtttt                                                                                                                     >  1:690036/1‑140 (MQ=255)

                  tCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTa                                                                                                                    <  2:611784/140‑1 (MQ=255)

                   cacaAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTAc                                                                                                                   >  2:436448/1‑140 (MQ=255)

                     caAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCa                                                                                                                 <  1:1100029/140‑1 (MQ=255)

                     caAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGGCGCTGTTCG‑CCCGCTAGATTTAGGTTTTACCa                                                                                                                 <  1:335938/140‑1 (MQ=255)

                       aaCCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACg                                                                                                               <  2:690036/140‑1 (MQ=255)

                        aCCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGt                                                                                                              >  2:63569/1‑140 (MQ=255)

                              cACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTaaaaa                                                                                                        >  2:227827/1‑140 (MQ=255)

                               aCTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTaaaaaa                                                                                                       <  2:1132763/140‑1 (MQ=255)

                                 tCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAAcc                                                                                                     >  1:1036396/1‑140 (MQ=255)

                                 tCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAAcc                                                                                                     <  1:1054200/140‑1 (MQ=255)

                                  ccccTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACcg                                                                                                    >  1:833539/1‑140 (MQ=255)

                                  ccccTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACcg                                                                                                    >  2:65819/1‑140 (MQ=255)

                                   cccttttcccttttCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACcgc                                                                                                   >  2:191811/1‑140 (MQ=255)

                                   cccttttcccttttCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACcgc                                                                                                   >  1:89302/1‑140 (MQ=255)

                                    ccttttcccttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACcgcg                                                                                                  >  1:24106/1‑140 (MQ=255)

                                          cccttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGa                                                                                            <  1:63569/140‑1 (MQ=255)

                                           ccttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGAt                                                                                           >  2:662568/1‑140 (MQ=255)

                                           ccttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGAt                                                                                           >  2:1215780/1‑140 (MQ=255)

                                           ccttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGAt                                                                                           >  1:688744/1‑140 (MQ=255)

                                           ccttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGAt                                                                                           <  1:1262370/140‑1 (MQ=255)

                                             ttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATgg                                                                                         >  2:1430890/1‑140 (MQ=255)

                                             ttttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATgg                                                                                         >  2:118567/1‑140 (MQ=255)

                                               ttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGc                                                                                       >  2:416417/1‑140 (MQ=255)

                                               ttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGc                                                                                       <  2:395892/140‑1 (MQ=255)

                                               ttcTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGc                                                                                       <  2:1036396/140‑1 (MQ=255)

                                                tctcCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCt                                                                                      <  2:553189/140‑1 (MQ=255)

                                                tctcCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCt                                                                                      <  2:1305366/140‑1 (MQ=255)

                                                tctcCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCt                                                                                      <  1:65819/140‑1 (MQ=255)

                                                     ggCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATg                                                                                 >  2:1097470/1‑140 (MQ=255)

                                                         aCGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGcaca                                                                             <  2:833539/140‑1 (MQ=255)

                                                            gCTATATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCg                                                                          >  2:890070/1‑140 (MQ=255)

                                                            gCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCg                                                                          <  2:912614/140‑1 (MQ=255)

                                                                     gAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTggagg                                                                 <  2:590748/140‑1 (MQ=255)

                                                                     gAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTggagg                                                                 >  1:820502/1‑140 (MQ=255)

                                                                       aCTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACATC‑GGCTGGCGGaag                                                              <  1:846295/140‑2 (MQ=255)

                                                                       aCTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACATC‑GGCTGGCGGaag                                                              >  2:846295/1‑139 (MQ=255)

                                                                       aCTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGaa                                                               >  2:1234359/1‑140 (MQ=255)

                                                                       aCTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGaa                                                               >  1:614960/1‑140 (MQ=255)

                                                                           aTCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATAcc                                                           >  1:359401/1‑140 (MQ=255)

                                                                           aTCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATAcc                                                           >  2:1025576/1‑140 (MQ=255)

                                                                           aTCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATAcc                                                           >  2:783936/1‑140 (MQ=255)

                                                                           aTCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATAcc                                                           >  1:1215092/1‑140 (MQ=255)

                                                                                aCCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGAc                                                      >  1:911140/1‑140 (MQ=255)

                                                                                  cacaTAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACgg                                                    <  1:227827/140‑1 (MQ=255)

                                                                                     aTAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGa                                                       <  1:898653/134‑1 (MQ=255)

                                                                                     aTAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGa                                                       >  2:898653/1‑134 (MQ=255)

                                                                                     aTAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGc                                                 >  1:670526/1‑140 (MQ=255)

                                                                                      tAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGcc                                                <  2:1158044/140‑1 (MQ=255)

                                                                                      tAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGcc                                                <  2:614960/140‑1 (MQ=255)

                                                                                       aaCAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCg                                               >  2:1470845/1‑140 (MQ=255)

                                                                                            ttattTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCgg                                          >  2:1448497/1‑140 (MQ=255)

                                                                                               ttttACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTg                                       >  2:1309474/1‑140 (MQ=255)

                                                                                               ttttACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTg                                       >  1:1013151/1‑140 (MQ=255)

                                                                                                 ttACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGc                                     <  1:1309474/140‑1 (MQ=255)

                                                                                                    cATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGAGGCTGGCAGc                                  >  1:981495/1‑140 (MQ=255)

                                                                                                         tGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCa                                    >  1:261574/1‑133 (MQ=255)

                                                                                                         tGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCa                                    <  2:261574/133‑1 (MQ=255)

                                                                                                         tGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGtttt                             >  1:125015/1‑140 (MQ=255)

                                                                                                         tGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGtttt                             >  1:378089/1‑140 (MQ=255)

                                                                                                         tGGACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGtttt                             >  2:389382/1‑140 (MQ=255)

                                                                                                          ggACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTATGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTa                            >  2:458075/1‑140 (MQ=255)

                                                                                                           gACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTAt                           >  2:101053/1‑140 (MQ=255)

                                                                                                           gACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTAt                           >  1:1449784/1‑140 (MQ=255)

                                                                                                           gACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTAt                           >  1:624561/1‑140 (MQ=255)

                                                                                                           gACAATTTTATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTAt                           >  1:1487584/1‑140 (MQ=255)

                                                                                                                ttttATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGa                      >  2:487383/1‑140 (MQ=255)

                                                                                                                 tttATGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGaa                     <  1:1470845/140‑1 (MQ=255)

                                                                                                                     tGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAAcgcg                 >  1:1298005/1‑140 (MQ=255)

                                                                                                                     tGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAAcgcg                 >  1:682323/1‑140 (MQ=255)

                                                                                                                     tGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAAcgc                  >  2:1407399/1‑139 (MQ=255)

                                                                                                                     tGAGCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAAcgc                  <  1:1407399/139‑1 (MQ=255)

                                                                                                                        gCTACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGccc              >  1:1050056/1‑140 (MQ=255)

                                                                                                                          tACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGt            >  1:1165567/1‑140 (MQ=255)

                                                                                                                          tACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGt            >  1:1215088/1‑140 (MQ=255)

                                                                                                                          tACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGt            >  2:686077/1‑140 (MQ=255)

                                                                                                                          tACCCGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGt            >  1:158833/1‑140 (MQ=255)

                                                                                                                            cccGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCa          >  2:1059166/1‑140 (MQ=255)

                                                                                                                              cGTCGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACg        <  1:518850/140‑1 (MQ=255)

                                                                                                                                 cGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCa          <  2:702270/135‑1 (MQ=255)

                                                                                                                                 cGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCa          >  1:702270/1‑135 (MQ=255)

                                                                                                                                 cGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCg     >  1:415385/1‑140 (MQ=255)

                                                                                                                                 cGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCg     >  1:836373/1‑140 (MQ=255)

                                                                                                                                 cGCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCg     <  2:158833/140‑1 (MQ=255)

                                                                                                                                  gCTGTTCG‑CCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCGt    <  2:125015/140‑1 (MQ=255)

                                                                                                                                    tGTTCG‑CCCACTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCGTgg  <  1:1307753/140‑1 (MQ=255)

TATTCTTTTTGAATCCCATCACAAACCCCGCACTCCCCTTTTCCCTTTTCTCCGGCGACGGCTAAATTAGAACTCATCCGACCACATAACAATTATTTTACATACTGGACAATTTTATGAGCTACCCGTCGCTGTTCGCCCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCGTGG  >  NC_000913/3231549‑3231821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`