Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,604,344 | 0 | C | T | 34.1% | 119.7 / 43.0 | 85 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional regulator BglJ |
Reads supporting (aligned to +/- strand): ref base C (15/41); new base T (29/0); total (44/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.31e-12 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 103 total aligned reads displayed.
ATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATC > NC_000913/4604207‑4604482 | aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATtttttttt > 1:853262/1‑140 (MQ=255) tGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCACAAAGTTTGCGGGTAACCCTTATAAGCTCCCTACCTATTCCAGTCAGGAGTCATTTCAGGCTGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATtttttcttt < 2:1426089/140‑1 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCAtttttttttttt > 1:1192120/1‑140 (MQ=255) cGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCAtttttttttttt > 2:763640/1‑140 (MQ=255) tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTttttctttttct < 1:1114675/140‑1 (MQ=255) tCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTttttctttttct < 2:1490002/140‑1 (MQ=255) cATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGTGGtttttttttttttt > 1:337521/1‑138 (MQ=255) cATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCAtttttttttttt > 1:592725/1‑137 (MQ=255) cATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATtttttcttttt < 2:592725/137‑1 (MQ=255) gtagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTGCCATg > 2:489794/1‑140 (MQ=255) taTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGaa > 1:111021/1‑140 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCAtttttttttttt > 2:327756/1‑123 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATtttttcttttt < 1:327756/123‑1 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTTCCATGAGaaaggag > 2:1109596/1‑135 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGAg > 1:433601/1‑140 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAg > 1:627790/1‑140 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTTCCATGAGAagagag > 1:281001/1‑140 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAg < 2:451938/136‑1 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAg > 1:451938/1‑136 (MQ=255) gTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAg < 1:639308/140‑1 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCCTTTTTTTTTTTTTTTCCATGGGAAGTGAgcg > 2:849240/1‑140 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAgcg < 1:489794/140‑1 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAgcg < 2:1192120/140‑1 (MQ=255) aTTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAgcg < 1:1109596/140‑1 (MQ=255) ttGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAgcgc > 2:1317357/1‑140 (MQ=255) tGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCa < 1:701780/140‑1 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGGCATGAGAAGGGAGCGCag > 1:813961/1‑140 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCag > 2:903895/1‑140 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCATGAGAAGTGGGCGCag > 1:873718/1‑140 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTTCCCTGAGAAGTGAgcgccg > 1:987962/1‑138 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAgcg > 1:426861/1‑137 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTTTGCCCTGAGAAGGGAGCGCag > 2:1337136/1‑140 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTTCCATGAGAAGGGAGCGCag > 1:891461/1‑140 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAgcg < 2:426861/137‑1 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCag > 1:27735/1‑140 (MQ=255) agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCaga < 1:1337136/140‑1 (MQ=255) agagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCaga < 1:873299/140‑1 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGTGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 1:101438/140‑1 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 2:647279/140‑1 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 2:417334/140‑1 (MQ=255) gagTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 2:1099459/140‑1 (MQ=255) agTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTTCCCTGGGAAAGGAgcgcggggg > 2:892616/1‑135 (MQ=255) tttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag > 1:383649/1‑137 (MQ=255) tttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 2:383649/137‑1 (MQ=255) ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTTTGCCCTGAGAAGGGAGCGCAGAGAggg > 1:1429633/1‑140 (MQ=255) ttATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAggg < 2:139143/140‑1 (MQ=255) tGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCCTTTTTTTTTTTTTTTCCATGAGAAGTGAGCGCAGAGAGGGGTTATCTTGCctgg > 2:1508373/1‑139 (MQ=255) tGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCctga < 1:1317357/140‑1 (MQ=255) ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGc < 2:270564/140‑1 (MQ=255) ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGc < 2:574104/140‑1 (MQ=255) ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTTTGCCATGAGAAGTGAGGGCAGAGAGGGGTTATCTTGCCTGACTGAACTGGCGAtt > 1:1258313/1‑140 (MQ=255) ataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGAtt < 1:911045/140‑1 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGtt < 2:27735/140‑1 (MQ=255) cTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGACATTTTTTCTTTTTTTGCCTTGAGGAGTGAATGCCGGGAGGGGTTATCTTGCCTGCCTAAACCGGCGATTTAGtt > 2:1285034/1‑140 (MQ=255) tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGGGCAGAGAGGGGTTATTTTGCCTGACTGAACTGGCGATTAAGttt > 2:911045/1‑140 (MQ=255) tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTTCCATGAGAAGGGAGGGCAGAGAGGGGTTATTTTTCCTGACTGAACTGGGGATTAAGttt > 2:205246/1‑140 (MQ=255) tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCCTGAGAAGTGGGGGCAGAGAGGGGTTATCTTTCCTGACTGAACTGGCGGTTAAGttt > 2:1409550/1‑140 (MQ=255) tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGAGGGGGGTTATTTTGCCTGACTAAAATGGCGGTTAAGttt > 2:331259/1‑140 (MQ=255) tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGttt > 2:114726/1‑140 (MQ=255) tCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGCCATTTTTTCTTTTTTTGCCCTTAGAAGAGAGCGCAGAGGGGGGTTATTTTTCCTGACTGAAATGGCGGTTTAGttt > 2:1148506/1‑140 (MQ=255) ccATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTc < 1:903895/140‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTTCCATGGGAAGTGGGCGCAGAGAGGGGTTATCTTGTCTGACTTGAATGGCGGTTAAGGTTTCGCGGAcc > 2:747462/1‑140 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCCTGAGAAGGGAGCGCAGAGAGGGGGTATCTTTCCTGACTGAACTGGCGATTTAGTTTTCGCGGAcc > 2:28188/1‑140 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTAcc < 1:899651/140‑1 (MQ=255) ataCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCAGACTGAACTGGCGATTAAGTTTCCGCGTAcc < 2:299417/140‑1 (MQ=255) agacaggTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTAcc < 1:1135658/134‑1 (MQ=255) ccAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTTTGCCTTTGGGAGTGAGAGCAGGGAGGGGTTATTTTGCCTTACTGAATTCGGGATTAAATTTCCGCGTACCCgc > 2:1304061/1‑139 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCCTTTTTTTTTTTTTTGCCGTGGGGAGGGAGTGCCCGGAGGGGATTTTTTGGCTGACTGAATCGGAGATTTAGTTTTCGCGGCCCCGGGGt > 2:446703/1‑140 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGGGGGGGGTTATCTTTCCTGACTGAAATGGGGATTAAGTTTTCGCGGACCCGGCgg > 2:1439830/1‑139 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTTCCCTGGGGAGGGAGGGCAGGGAGGGGTTATCTTTTCTGACTGTAATGGCGGGTAAGGTTTCGCGGATCCGGCgg > 2:953361/1‑139 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTTTGCCCTGAGAAGGGAGCGCAGAGAGGGATTATTTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCcgcgg > 2:158765/1‑139 (MQ=255) gAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTTTTCCATGAGAAGGGAGCGCAGAGAGGGGTTTTCTTTCCTGACTGAACTGGCGATTAAGTTTCCGCGTGCCCGGCGTTTTGt > 2:1248673/1‑140 (MQ=255) aGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATTTTTCCTGACTGAACTGGCGGTTAAATTTCCGCGTACCCCGCGGTTTGtt > 2:1234443/1‑140 (MQ=255) tCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTAt < 2:28125/140‑1 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTg < 1:212442/140‑1 (MQ=255) tttCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGGGCAGGGAGGGGTTATCTTTCCTGACTGAACTGGCGGTTAAGTTTTCGCGTACCCCGCGGTTAGtctgtct > 2:1135658/1‑134 (MQ=255) tCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTGCCATGAGAAGGGAGCGCAGAGGGGGGTTTTCTTTTCTGACTGAACTGGCGATTAAGTTTTCGCGTACCCCGCGGTTTGTTATTGCgg > 2:1290097/1‑140 (MQ=255) aGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTTTTCCCTGAGAAGTGAGGGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGGTTAAGTTTTCGCGTACCCGGCGGTTTGTTTTTgggggg > 2:945431/1‑138 (MQ=255) aGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgat < 1:953361/140‑1 (MQ=255) aGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGGCATTTTTTCTTTTTCTGCCCTTAGGAGGGAGCGCAAAGAGGGAGTTTATTGCCTGAGTGAAATGGCGATTAAAAGTCCCCGCATCCCGCGTTTTGTTATTGCggcg > 2:466955/1‑138 (MQ=255) cagCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgat < 1:1192754/138‑1 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgat < 1:531137/140‑1 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgat < 1:28188/140‑1 (MQ=255) aTGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgat < 2:750886/140‑1 (MQ=255) tGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgatg > 1:1359132/1‑140 (MQ=255) tGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGgatgatg < 1:1291843/140‑1 (MQ=255) aTGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGatat < 1:114726/140‑1 (MQ=255) aTGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGatat < 2:111021/140‑1 (MQ=255) gcgGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAg < 1:1234443/140‑1 (MQ=255) ggATCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTGCCATGAGAAGGGAGCGCAGAGAGGGAGTATCTTGCCTGACTGAACTGGCGGTTAAGTTTCCGCGTACCCCGCGTTTTGTTATTGCGGATGATGATATTTAAGCt > 2:236580/1‑140 (MQ=255) ggATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCt < 1:158765/140‑1 (MQ=255) aTCTCGTTTGCGGC‑GGTCATTTTTTTTTTTTCTGCCCTGAGAAGTGAGCGCAGAGAGGGGTTATCTTTCCTGACTTAACTGGCGATTAAGTTTTCGCGTACCCCGCGTTTTGTTATTTCGGATGATGATATTTAAGcctg > 2:1192754/1‑137 (MQ=255) cggc‑ggTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGt < 2:337521/140‑1 (MQ=255) c‑ggTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCa < 1:981574/140‑1 (MQ=255) gTCATTTTTTTTTTTTTTTCCATGAGAAGGGAGCGCAGAGAGGGGTTTTCTTTCCTGACTGAACTGGCGGTTAAGTTTTCGCGGACCCGGCGTTTAGTTTTTGCGGGTGATGATATTGAAGCTCGGCTGGTTGGTTCAtt > 2:1025764/1‑140 (MQ=255) gTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCAtt < 2:908186/140‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 1:1508373/140‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 1:1439830/140‑1 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCAt < 2:710059/140‑1 (MQ=255) tctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATc < 2:407806/140‑1 (MQ=255) | ATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGC‑GGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATC > NC_000913/4604207‑4604482 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |