Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,206,435	0	C	T	29.2%	76.4 / 26.4	48	intergenic (‑179/‑28)	ttdR/ttdA	DNA‑binding transcriptional activator Dan/L(+)‑tartrate dehydratase subunit alpha
Reads supporting (aligned to +/- strand):  ref base C (0/34);  new base T (14/0);  total (14/34)
Fisher's exact test for biased strand distribution p-value = 2.07e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA  >  NC_000913/3206296‑3206574                                                                                                                                             |                                                                                                                                             gCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTc                                                                                                                                              <  2:1952494/140‑1 (MQ=255)   aaaaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTcc                                                                                                                                             >  2:525203/1‑140 (MQ=255)     aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGa                                                                                                                                          >  1:498785/1‑140 (MQ=255)     aaCATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGa                                                                                                                                          >  1:1533422/1‑140 (MQ=255)            ccATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAAATTTTTCCGACaaaaaa                                                                                                                                   >  2:300467/1‑137 (MQ=255)               ttCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGACAaaaaaaaa                                                                                                                                >  2:541875/1‑140 (MQ=255)                  ccTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGACAaaaaaaaaaaa                                                                                                                             >  1:479049/1‑139 (MQ=255)                    tGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATTTTTTCA‑ACAaaaaaaaaaaaag                                                                                                                           >  2:1311107/1‑137 (MQ=255)                      ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GTATTTTTTCCGACAAATAAAAAAAATGGa                                                                                                                         >  1:275606/1‑140 (MQ=255)                      ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GGATTTTTTCAGACAAAAAAAAAAAATGGa                                                                                                                         >  2:1353899/1‑140 (MQ=255)                      ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGa                                                                                                                         <  1:461834/140‑1 (MQ=255)                       tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTTGA‑g                                                                                                                       <  2:43582/140‑1 (MQ=255)                       tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                       <  1:300467/140‑1 (MQ=255)                       tctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑g                                                                                                                       <  1:752162/140‑1 (MQ=255)                           gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGTGGAATGTTTTCCGCCAAAAAAAAAAAACGGA‑GTTg                                                                                                                    >  2:1190545/1‑140 (MQ=255)                           gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAAACAAAAAAAAAAAATGGA‑GGTGc                                                                                                                   >  2:245246/1‑140 (MQ=255)                           gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAAATTTTTCAGACAAAAAAAAAAAAAGGA‑GGTgt                                                                                                                   >  2:752162/1‑139 (MQ=255)                               aaTATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCatg                                                                                                               <  2:130392/140‑1 (MQ=255)                                atatTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGA‑GGTGGCatga                                                                                                              >  1:1653228/1‑140 (MQ=255)                                   ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCAtgatga                                                                                                           <  1:988595/140‑1 (MQ=255)                                   ttcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCAtgatga                                                                                                           <  1:1033506/140‑1 (MQ=255)                                    tcattcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAg                                                                                                          <  2:867576/140‑1 (MQ=255)                                       ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGa                                                                                                       <  1:1851747/140‑1 (MQ=255)                                       ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGa                                                                                                       <  2:667632/140‑1 (MQ=255)                                       ttcTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGa                                                                                                       <  1:614131/140‑1 (MQ=255)                                            aTTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGC‑GAAGTTTTCCAAACAAAAACAAAAACTGGA‑ATTGACATTGTTGGCGAAAgga                                                                                                  >  2:1532497/1‑138 (MQ=255)                                              tttCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGtaat                                                                                                <  2:1240940/140‑1 (MQ=255)                                                    gTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGA‑GTTGCCATGATGAGCGAAAGGAAAAAACaa                                                                                          >  1:1311620/1‑140 (MQ=255)                                                      tGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACa                                                                                        <  1:69035/140‑1 (MQ=255)                                                        aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                      <  1:245246/140‑1 (MQ=255)                                                        aTTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAgg                                                                                      <  1:120313/140‑1 (MQ=255)                                                          tCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCa                                                                                    <  1:318595/140‑1 (MQ=255)                                                               aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                               <  1:1532497/140‑1 (MQ=255)                                                               aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                               <  1:1118969/140‑1 (MQ=255)                                                               aaCTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATCAGCGAAAGTAATAAGCAACAGGCAGTGaa                                                                               <  2:1565535/140‑1 (MQ=255)                                                                 cTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATAATGAGCGAAAGTAATAAGCAACAGGCAGTGAATa                                                                             <  2:1137647/140‑1 (MQ=255)                                                                            atatTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAAATTTTTCACACAAAAACAAAAAATGGA‑GGTGGCATGATGAGCGAAAATAAAAAAAAAAAAGCAGAGAAAAAAATTACagag                                                                  >  2:1829702/1‑140 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GGATTTTTTCCGACAAAAAAAAAAACAAGA‑GGTGCCATTATGAGCGGAAGTAATAAAAAAAAAGCAGGGAATAAAGTGGCAgagaa                                                                >  2:903140/1‑139 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGACAAAAACAAAAAATGGG‑GGTGGCATGATGAGCGAAAATAAAAATTAAAAAGCAGTGAATAAATTGAAAgagaa                                                                >  2:1486728/1‑139 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAt                                                                <  2:1717163/140‑1 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAAATTTTTCAGACAAAAAAAAAAAATGGA‑GTTGGCATGATGAGCGGAAAAAATAAAAAAAAGGCAGTGAAAAAATTGGAAGAGAt                                                                >  2:1328885/1‑140 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGG‑GAATTTTTTCACACAAAAAAAAAAAAATTA‑GGTGTCAGGTTGAGGGAAAGAAATAAATAAAAAACAGTGAAAAAATTTAAAGAGAt                                                                >  2:1829178/1‑140 (MQ=255)                                                                              atTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGG‑GAAATTTTTCAGACAAAAAAAAAAAATGGA‑GTTGGCATGATGAGGGAAAGAAAAAAACAAAAAGCAGTGAATAAGTTGAAAgagaa                                                                >  2:1905023/1‑139 (MQ=255)                                                                               ttCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGAtt                                                               <  1:541875/140‑1 (MQ=255)                                                                                        gCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAAATTTTTCAGACAAAAAAAAAAAAAGGA‑GGTGGCATGATGAGCGAAAGAAAAAAACAAAAAGCAGAGAAAAAATTGACAGAGAATGTCGCTaaa                                                      >  2:1187192/1‑139 (MQ=255)                                                                                         cAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGACAAAAAAAAAAAAAGGA‑GGTTCCCTGATGAGGGGAAATAATAAACAAAAAGCAGTGAAAAAATTGAAAGAGATTGTCGCTAACt                                                     >  2:882825/1‑140 (MQ=255)                                                                                            aaaaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTa                                                  <  2:251808/140‑1 (MQ=255)                                                                                              aaTATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTAcc                                                <  1:525203/140‑1 (MQ=255)                                                                                                 ataAAACCACATTTTTAGTGGTAGTTTGGGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGcc                                             <  2:754996/140‑1 (MQ=255)                                                                                                                 ggTGGTAGTTTGTGGCGGT‑GATTTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGaa                             <  1:1920175/139‑1 (MQ=255)                                                                                                                  gTGGTAGTTTGTGGCGGT‑GAATTTTTTCAGACAAAAACAAAAAATGGA‑GGTGGCATGGTGAGCGAAAGAAAAAAAAAAAAAGCAGGGAATAAATTGAAAGAGAATGTTGCTAAATTTTCCGCCATGATTTTTTCCCCaaa                            >  2:1453660/1‑139 (MQ=255)                                                                                                                  gTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAAt                            <  1:1938077/140‑1 (MQ=255)                                                                                                                       aGTTTGTGGCGGT‑GAATTTTTTCAGACAAAAACAAAAAATGGA‑GTTGGCATGATGAGGGGAAGAAAAAAAAAACAAGCAAGGAAAAAAATGACAGAGATTTTCGCTAACTTTACCCCCCTGATTTCTACCCCAATGCCtg                       >  2:864138/1‑140 (MQ=255)                                                                                                                         tttGTGGCGGT‑GATTTTTTCCAGAAAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAAAAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAATTTTACCGCCATGATTTCTACCCGAATGCCtgat                     <  1:1353899/140‑1 (MQ=255)                                                                                                                         tttGTGGCGGT‑GAATTTTTTCCGACAAATACAAAAAATTGAGGTTGCC‑TGGTGGGCGAAAAAAAAAAAAAAAAAGCAGAGAAAAAATTGACAGAGATTGTCGCTAAACTTTCCCCCATGATTTCTAACCCAAAGCCcgag                     >  2:716908/1‑139 (MQ=255)                                                                                                                         tttGTGGCGGT‑AAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGAAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgat                     <  1:1453660/140‑1 (MQ=255)                                                                                                                          ttGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  1:206092/140‑1 (MQ=255)                                                                                                                          ttGTGGCGGT‑GAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg                    <  2:1653228/140‑1 (MQ=255)                                                                                                                            gtgGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGAc                  <  1:1328885/140‑1 (MQ=255)                                                                                                                            gtgGCGGT‑GAATTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTAAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGAc                  <  1:1829702/140‑1 (MQ=255)                                                                                                                             tgGCGGT‑GAATTTTTTCAGACAAAAAAAAAAAATGGA‑GTTGGCATGATGGGCGAAAGTAATAAAAAAAAAGCAGTGAAAAAAATGACAGAGATTGTCGCTAACTTTTACCCCATGATTTTTACCCGAATGCCTGATGACg                 >  2:1262277/1‑140 (MQ=255)                                                                                                                               gCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg               <  1:864138/140‑1 (MQ=255)                                                                                                                                     taaTTTTTCCAGACAAATACAAAAACGGGA‑TTTGCCATGAGGAGCGAAAGTATTAAGCAACAGGCAGTGAATAGGTGGAGAGAGATTGGCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  2:633816/139‑1 (MQ=255)                                                                                                                                     gAATTTTTCCAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  1:1905023/140‑1 (MQ=255)                                                                                                                                     aaaTTTTTCCAGACAAATAAAAAAACTGGA‑GTTGCCATGATGAGCGAAAGAAATAAGCAACAGGCAGTGAATAAGTTGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGa          <  1:1696187/139‑1 (MQ=255)                                                                                                                                             ccAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa  >  2:662658/1‑140 (MQ=255)                                                                                                                                             ccAGAAAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTaa  <  1:282496/140‑1 (MQ=255)                                                                                                                                             |                                                                                                                                             GCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCACATTTTTAGTGGTAGTTTGTGGCGGT‑GAATTTTTCCAGACAAATACAAAAACTGGA‑GTTGCCATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAA  >  NC_000913/3206296‑3206574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑